RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 C11orf91Q3C1V1 193 aa9.59□□□□□ -0.87
DEPDC4-210ENST00000551642 PMFBP1Q8TBY8 1022 aa9.59□□□□□ -0.87
DEPDC4-210ENST00000551642 SUV39H2Q9H5I1 410 aa9.59□□□□□ -0.87
DEPDC4-210ENST00000551642 PRDM6Q9NQX0 595 aa9.59□□□□□ -0.87
DEPDC4-210ENST00000551642 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.58□□□□□ -0.88
DEPDC4-210ENST00000551642 EPB42P16452 691 aa9.58□□□□□ -0.88
DEPDC4-210ENST00000551642 GSX2Q9BZM3 304 aa9.58□□□□□ -0.88
DEPDC4-210ENST00000551642 BTAF1O14981 1849 aa9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 KRBA1A5PL33 1030 aa9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 INPP5BP32019 993 aa9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 DGKZQ13574 1117 aa9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 FAM50AQ14320 339 aaKnown RBP9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 OCLNQ16625 522 aa9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 COL26A1Q96A83 441 aa9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 PBXIP1Q96AQ6 731 aa9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 CCDC97Q96F63 343 aaPredicted RBP9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 NHSQ6T4R5 1651 aa9.57□□□□□ -0.88
DEPDC4-210ENST00000551642 BCL9O00512 1426 aa9.56□□□□□ -0.88
DEPDC4-210ENST00000551642 MSTNO14793 375 aa9.56□□□□□ -0.88
DEPDC4-210ENST00000551642 ADH7P40394 386 aa9.56□□□□□ -0.88
DEPDC4-210ENST00000551642 FKBP5Q13451 457 aaPredicted RBP9.56□□□□□ -0.88
DEPDC4-210ENST00000551642 MARCH10Q8NA82 808 aaPredicted RBP9.56□□□□□ -0.88
DEPDC4-210ENST00000551642 BHMTQ93088 406 aa9.56□□□□□ -0.88
DEPDC4-210ENST00000551642 KLK14Q9P0G3 267 aa9.56□□□□□ -0.88
DEPDC4-210ENST00000551642 STK26Q9P289 416 aa9.56□□□□□ -0.88
DEPDC4-210ENST00000551642 IDH3AP50213 366 aa9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 ZC3H6P61129 1189 aaKnown RBP9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 CCINQ13939 588 aa9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 RAB44Q7Z6P3 723 aaPredicted RBP9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 STK32AQ8WU08 396 aa9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 TRIM11Q96F44 468 aa9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 SPOCK3Q9BQ16 436 aa9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 NMRK2Q9NPI5 230 aa9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 STARD13Q9Y3M8 1113 aa9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 PDE4DIPQ5VU43 2346 aa9.55□□□□□ -0.88
DEPDC4-210ENST00000551642 KAT6BQ8WYB5 2073 aa9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 CICQ96RK0 1608 aaPredicted RBP9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 MICAL2O94851 1124 aa9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 PROCP04070 461 aa9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 POLD1P28340 1107 aa9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 GRNP28799 593 aaKnown RBP9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 ARSDP51689 593 aa9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 MICALL1Q8N3F8 863 aa9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 LRFN2Q9ULH4 789 aa9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 THRAP3Q9Y2W1 955 aaKnown RBP9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 PNPLA7Q6ZV29 1317 aa9.54□□□□□ -0.88
DEPDC4-210ENST00000551642 ABCC11Q96J66 1382 aa9.53□□□□□ -0.88
DEPDC4-210ENST00000551642 EVA1CP58658 441 aa9.53□□□□□ -0.88
DEPDC4-210ENST00000551642 TRIM26Q12899 539 aaPredicted RBP9.53□□□□□ -0.88
DEPDC4-210ENST00000551642 COL9A3Q14050 684 aaPredicted RBP9.53□□□□□ -0.88
DEPDC4-210ENST00000551642 C20orf204Q6ZNR8 217 aa9.53□□□□□ -0.88
DEPDC4-210ENST00000551642 PRIMPOLQ96LW4 560 aa9.53□□□□□ -0.88
DEPDC4-210ENST00000551642 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.53□□□□□ -0.88
DEPDC4-210ENST00000551642 COL5A2P05997 1499 aaPredicted RBP9.53□□□□□ -0.88
DEPDC4-210ENST00000551642 ROCK1Q13464 1354 aa9.52□□□□□ -0.88
DEPDC4-210ENST00000551642 SPDYE3A6NKU9 549 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 M0R082 166 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 PRMT3O60678 531 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 MAP3K6O95382 1288 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 COX20Q5RI15 118 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 TMEM164Q5U3C3 297 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 ZNF417Q8TAU3 575 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 CLP1Q92989 425 aaKnown RBP9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 IFT43Q96FT9 208 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 ZNF587Q96SQ5 575 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 PLVAPQ9BX97 442 aa9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 CXXC1Q9P0U4 656 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-210ENST00000551642 NUP155O75694 1391 aa9.51□□□□□ -0.89
DEPDC4-210ENST00000551642 ALBP02768 609 aa9.51□□□□□ -0.89
DEPDC4-210ENST00000551642 PCSK7Q16549 785 aa9.51□□□□□ -0.89
DEPDC4-210ENST00000551642 TMEM132EQ6IEE7 984 aa9.51□□□□□ -0.89
DEPDC4-210ENST00000551642 PNMA5Q96PV4 448 aa9.51□□□□□ -0.89
DEPDC4-210ENST00000551642 OPLAHO14841 1288 aa9.5□□□□□ -0.89
DEPDC4-210ENST00000551642 EGFRP00533 1210 aa9.5□□□□□ -0.89
DEPDC4-210ENST00000551642 SPATA31C1P0DKV0 1188 aa9.5□□□□□ -0.89
DEPDC4-210ENST00000551642 MLLT1Q03111 559 aaPredicted RBP9.5□□□□□ -0.89
DEPDC4-210ENST00000551642 DDB1Q16531 1140 aa9.5□□□□□ -0.89
DEPDC4-210ENST00000551642 UBE2OQ9C0C9 1292 aaKnown RBP9.5□□□□□ -0.89
DEPDC4-210ENST00000551642 SLC6A14Q9UN76 642 aa9.5□□□□□ -0.89
DEPDC4-210ENST00000551642 RGPD5Q99666 1765 aa9.5□□□□□ -0.89
DEPDC4-210ENST00000551642 CRB1P82279 1406 aa9.49□□□□□ -0.89
DEPDC4-210ENST00000551642 ANKARQ7Z5J8 1434 aa9.49□□□□□ -0.89
DEPDC4-210ENST00000551642 PTCD1O75127 700 aaKnown RBP9.49□□□□□ -0.89
DEPDC4-210ENST00000551642 NID1P14543 1247 aa9.49□□□□□ -0.89
DEPDC4-210ENST00000551642 NFKB1P19838 968 aa9.49□□□□□ -0.89
DEPDC4-210ENST00000551642 RGS19P49795 217 aa9.49□□□□□ -0.89
DEPDC4-210ENST00000551642 C16orf46Q6P387 395 aa9.49□□□□□ -0.89
DEPDC4-210ENST00000551642 PRR36Q9H6K5 1346 aa9.49□□□□□ -0.89
DEPDC4-210ENST00000551642 QRICH2Q9H0J4 1663 aa9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 COL18A1P39060 1754 aa9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 BRD2P25440 801 aaKnown RBP9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 ITGAEP38570 1179 aa9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 FSTL1Q12841 308 aa9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 TREML1Q86YW5 311 aa9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 DNAJB12Q9NXW2 375 aaKnown RBP9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 ADGRF5Q8IZF2 1346 aa9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 PKD1L3Q7Z443 1732 aa9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 YTHDC2Q9H6S0 1430 aaKnown RBP9.48□□□□□ -0.89
DEPDC4-210ENST00000551642 LILRB5O75023 590 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms