RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 NEDD4P46934 1319 aa15.11■□□□□ 0.01
CACNB3-219ENST00000551544 KAT6BQ8WYB5 2073 aa15.11■□□□□ 0.01
CACNB3-219ENST00000551544 CBX1P83916 185 aa15.11■□□□□ 0.01
CACNB3-219ENST00000551544 CCZ1BP86790 482 aa15.11■□□□□ 0.01
CACNB3-219ENST00000551544 CCZ1P86791 482 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-219ENST00000551544 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
CACNB3-219ENST00000551544 APOA5Q6Q788 366 aa15.11■□□□□ 0.01
CACNB3-219ENST00000551544 IFNKQ9P0W0 207 aa15.11■□□□□ 0.01
CACNB3-219ENST00000551544 PAXBP1Q9Y5B6 917 aa15.11■□□□□ 0.01
CACNB3-219ENST00000551544 SHANK3Q9BYB0 1731 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 MROH7-TTC4A0A0A0MT08 1334 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 TOGARAM1Q9Y4F4 1720 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 CMA1P23946 247 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 SLC39A14Q15043 492 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 CPLX2Q6PUV4 134 aaKnown RBP15.1■□□□□ 0.01
CACNB3-219ENST00000551544 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 SLC4A9Q96Q91 983 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 SNAP23O00161 211 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 CDKL5O76039 1030 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 KIF20AO95235 890 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 PTPN14Q15678 1187 aa15.1■□□□□ 0.01
CACNB3-219ENST00000551544 XPO4Q9C0E2 1151 aaKnown RBP15.1■□□□□ 0.01
CACNB3-219ENST00000551544 ZBTB43O43298 467 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 PDE8AO60658 829 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-219ENST00000551544 NLRP12P59046 1061 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 NCBP1Q09161 790 aaKnown RBP15.09■□□□□ 0.01
CACNB3-219ENST00000551544 NAA30Q147X3 362 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-219ENST00000551544 TMEM67Q5HYA8 995 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 ZNF512BQ96KM6 892 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-219ENST00000551544 ZHX1Q9UKY1 873 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-219ENST00000551544 GOLGA8AA7E2F4 631 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 UBE2Q2LH0YL09 131 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 SYKP43405 635 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 CTDSPL2Q05D32 466 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 SYCP1Q15431 976 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 TMC6Q7Z403 805 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 STRBPQ96SI9 672 aaKnown RBP15.09■□□□□ 0.01
CACNB3-219ENST00000551544 BTG4Q9NY30 223 aa15.09■□□□□ 0.01
CACNB3-219ENST00000551544 IARSP41252 1262 aaKnown RBP15.08■□□□□ 0.01
CACNB3-219ENST00000551544 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
CACNB3-219ENST00000551544 UQCRFS1P1P0C7P4 283 aa15.08■□□□□ 0
CACNB3-219ENST00000551544 MAGEB6Q8N7X4 407 aa15.08■□□□□ 0
CACNB3-219ENST00000551544 IGDCC4Q8TDY8 1250 aa15.08■□□□□ 0
CACNB3-219ENST00000551544 CLIC6Q96NY7 704 aa15.08■□□□□ 0
CACNB3-219ENST00000551544 AKAP11Q9UKA4 1901 aa15.08■□□□□ 0
CACNB3-219ENST00000551544 MYH7P12883 1935 aa15.08■□□□□ 0
CACNB3-219ENST00000551544 TCRBV5S4A2TA0A5A2 114 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 MBD4O95243 580 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 U2AF2P26368 475 aaKnown RBP eCLIP15.07■□□□□ 0
CACNB3-219ENST00000551544 ARID4AP29374 1257 aaPredicted RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 GSDMDP57764 484 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 TPM4P67936 248 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 TRIM29Q14134 588 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 PUM3Q15397 648 aaKnown RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 DZIP3Q86Y13 1208 aaKnown RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 STK11IPQ8N1F8 1099 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 TMEM87BQ96K49 555 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 BPIFA3Q9BQP9 254 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 NAPBQ9H115 298 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 LY9Q9HBG7 655 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 IFIT3O14879 490 aaKnown RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 RANBP6O60518 1105 aaKnown RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 CCAR2Q8N163 923 aaKnown RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 LPIN2Q92539 896 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 FEZ1Q99689 392 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 SLC26A6Q9BXS9 759 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 ARMT1Q9H993 441 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 TOMM22Q9NS69 142 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 UBN2Q6ZU65 1347 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 RRP12Q5JTH9 1297 aaKnown RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 SHC4Q6S5L8 630 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 IFNL3Q8IZI9 196 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 SPATA5Q8NB90 893 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 EPB41L4AQ9HCS5 686 aaPredicted RBP15.07■□□□□ 0
CACNB3-219ENST00000551544 SLC12A7Q9Y666 1083 aa15.07■□□□□ 0
CACNB3-219ENST00000551544 ATRNO75882 1429 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 A0A0G2JS52 829 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 NCAPHQ15003 741 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 NYAP1Q6ZVC0 841 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 JMYQ8N9B5 988 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 OSBPL5Q9H0X9 879 aaPredicted RBP15.06■□□□□ 0
CACNB3-219ENST00000551544 ZSWIM5Q9P217 1185 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 PNOCQ13519 176 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 PTPAQ15257 358 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 NTRK3Q16288 839 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 FAM217BQ9NTX9 383 aaPredicted RBP15.06■□□□□ 0
CACNB3-219ENST00000551544 IMPACTQ9P2X3 320 aa15.06■□□□□ 0
CACNB3-219ENST00000551544 MYO5AQ9Y4I1 1855 aaKnown RBP15.05■□□□□ 0
CACNB3-219ENST00000551544 PATL2C9JE40 543 aaKnown RBP15.05■□□□□ 0
CACNB3-219ENST00000551544 ATP1A3P13637 1013 aa15.05■□□□□ 0
CACNB3-219ENST00000551544 MAP3K12Q12852 859 aa15.05■□□□□ 0
CACNB3-219ENST00000551544 RASGRF1Q13972 1273 aa15.05■□□□□ 0
CACNB3-219ENST00000551544 ARMCX5Q6P1M9 558 aa15.05■□□□□ 0
CACNB3-219ENST00000551544 ZKSCAN3Q9BRR0 538 aa15.05■□□□□ 0
CACNB3-219ENST00000551544 C4AP0C0L4 1744 aa15.05■□□□□ 0
CACNB3-219ENST00000551544 C4BP0C0L5 1744 aa15.05■□□□□ 0
CACNB3-219ENST00000551544 XIRP1Q702N8 1843 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms