RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 ZNF496Q96IT1 587 aaPredicted RBP7.71□□□□□ -1.17
PTPRR-211ENST00000551219 DCAF5Q96JK2 942 aa7.71□□□□□ -1.17
PTPRR-211ENST00000551219 ORC3Q9UBD5 711 aaPredicted RBP7.71□□□□□ -1.17
PTPRR-211ENST00000551219 DNAI1Q9UI46 699 aa7.71□□□□□ -1.17
PTPRR-211ENST00000551219 NDUFB9Q9Y6M9 179 aa7.71□□□□□ -1.17
PTPRR-211ENST00000551219 MAP3K15Q6ZN16 1313 aa7.71□□□□□ -1.17
PTPRR-211ENST00000551219 GOLGA8BA8MQT2 603 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 CAPN15O75808 1086 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 CDKL5O76039 1030 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 PFKFB1P16118 471 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 MYL5Q02045 173 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 SLC39A6Q13433 755 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 AXDND1Q5T1B0 1012 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-211ENST00000551219 HOMER1Q86YM7 354 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 NEUROD6Q96NK8 337 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 SGIP1Q9BQI5 828 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 TMX1Q9H3N1 280 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 ZNF446Q9NWS9 450 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.71□□□□□ -1.18
PTPRR-211ENST00000551219 V9GYY5 206 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-211ENST00000551219 EFCAB8A8MWE9 144 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 EYA2O00167 538 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 CPLX1O14810 134 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 PRC1O43663 620 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 KIF23Q02241 960 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-211ENST00000551219 SLC39A14Q15043 492 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 CCDC158Q5M9N0 1113 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 TMCO3Q6UWJ1 677 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 MB21D2Q8IYB1 491 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-211ENST00000551219 MNS1Q8NEH6 495 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 NCOA7Q8NI08 942 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 UBXN4Q92575 508 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 NOL10Q9BSC4 688 aaKnown RBP7.71□□□□□ -1.18
PTPRR-211ENST00000551219 CWC25Q9NXE8 425 aaPredicted RBP7.71□□□□□ -1.18
PTPRR-211ENST00000551219 CPDO75976 1380 aa7.71□□□□□ -1.18
PTPRR-211ENST00000551219 KLF18A0A0U1RQI7 1052 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 M0R2C6 588 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 CHGBP05060 677 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 CLCN6P51797 869 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 ERCC6LQ2NKX8 1250 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 ARHGAP29Q52LW3 1261 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 TEX35Q5T0J7 233 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 OLFM4Q6UX06 510 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 RALYLQ86SE5 291 aaKnown RBP7.7□□□□□ -1.18
PTPRR-211ENST00000551219 ANKLE2Q86XL3 938 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 MPHOSPH8Q99549 860 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 HPSEQ9Y251 543 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 FHOD1Q9Y613 1164 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 DDX60Q8IY21 1712 aaKnown RBP7.7□□□□□ -1.18
PTPRR-211ENST00000551219 PARP4Q9UKK3 1724 aaKnown RBP7.7□□□□□ -1.18
PTPRR-211ENST00000551219 A0A087WWV3 80 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 IRF6O14896 467 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 ARHGAP6O43182 974 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 ZRANB2O95218 330 aaKnown RBP eCLIP7.7□□□□□ -1.18
PTPRR-211ENST00000551219 SYKP43405 635 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 UBASH3AP57075 661 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 CPLX2Q6PUV4 134 aaKnown RBP7.7□□□□□ -1.18
PTPRR-211ENST00000551219 VSTM4Q8IW00 320 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 HOOK1Q9UJC3 728 aaKnown RBP7.7□□□□□ -1.18
PTPRR-211ENST00000551219 AKAP2Q9Y2D5 859 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 ZMYM6O95789 1325 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 GLI3P10071 1580 aa7.7□□□□□ -1.18
PTPRR-211ENST00000551219 TADA3O75528 432 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 SERPINC1P01008 464 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 PNMA6AP0CW24 399 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-211ENST00000551219 APPBP2Q92624 585 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 HPS5Q9UPZ3 1129 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 AXIN2Q9Y2T1 843 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 ZNF142P52746 1687 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-211ENST00000551219 A0A1B0GUL7 405 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 ATP5J2-PTCD1G3V325 749 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 CUTAO60888 179 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 PTCD1O75127 700 aaKnown RBP7.69□□□□□ -1.18
PTPRR-211ENST00000551219 POLR3DP05423 398 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-211ENST00000551219 TOP1P11387 765 aaKnown RBP7.69□□□□□ -1.18
PTPRR-211ENST00000551219 CYP2C19P33261 490 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 AMHR2Q16671 573 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 CCDC191Q8NCU4 936 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 ERCC4Q92889 916 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-211ENST00000551219 DACH1Q9UI36 760 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 PKD1L3Q7Z443 1732 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 MEGF6O75095 1541 aa7.69□□□□□ -1.18
PTPRR-211ENST00000551219 BIN1O00499 593 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
PTPRR-211ENST00000551219 KCNA1Q09470 495 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 RESP18Q5W5W9 173 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 TRIM65Q6PJ69 517 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 OSBP2Q969R2 916 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 MROH7-TTC4A0A0A0MT08 1334 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 TJP1Q07157 1748 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 NUP188Q5SRE5 1749 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 ZNF213O14771 459 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 TIMM10P62072 90 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 CFAP100Q494V2 611 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 TTC39AQ5SRH9 613 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 JAKMIP3Q5VZ66 844 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 CHST3Q7LGC8 479 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 REXO1L1PQ8IX06 675 aa7.68□□□□□ -1.18
PTPRR-211ENST00000551219 TSPYL1Q9H0U9 437 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms