RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 PPFIA3O75145 1194 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 RAB11FIP4Q86YS3 637 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 SDR42E1Q8WUS8 393 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 SYCE3A1L190 88 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 GAS2L3Q86XJ1 694 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 PDS5AQ29RF7 1337 aaKnown RBP18.18■□□□□ 0.5
SCN8A-206ENST00000550891 CCDC69A6NI79 296 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 CDKL5O76039 1030 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 METAP2P50579 478 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCN8A-206ENST00000550891 SPATA32Q96LK8 384 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 NEDD4P46934 1319 aa18.18■□□□□ 0.5
SCN8A-206ENST00000550891 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 CYB5R4Q7L1T6 521 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 CTDNEP1O95476 244 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 ORC3Q9UBD5 711 aaPredicted RBP18.17■□□□□ 0.5
SCN8A-206ENST00000550891 CFAP45Q9UL16 551 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 JAG2Q9Y219 1238 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 SH2B2O14492 632 aaPredicted RBP18.17■□□□□ 0.5
SCN8A-206ENST00000550891 PPARAQ07869 468 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 MICU3Q86XE3 530 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 WDR66Q8TBY9 1149 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 CRNKL1Q9BZJ0 848 aaKnown RBP18.17■□□□□ 0.5
SCN8A-206ENST00000550891 SLC12A7Q9Y666 1083 aa18.17■□□□□ 0.5
SCN8A-206ENST00000550891 DOCK2Q92608 1830 aa18.16■□□□□ 0.5
SCN8A-206ENST00000550891 ZBTB43O43298 467 aa18.16■□□□□ 0.5
SCN8A-206ENST00000550891 MECOMQ03112 1051 aa18.16■□□□□ 0.5
SCN8A-206ENST00000550891 UBAC1Q9BSL1 405 aa18.16■□□□□ 0.5
SCN8A-206ENST00000550891 TFIP11Q9UBB9 837 aaKnown RBP18.16■□□□□ 0.5
SCN8A-206ENST00000550891 UFL1O94874 794 aa18.16■□□□□ 0.5
SCN8A-206ENST00000550891 RXRBP28702 533 aa18.16■□□□□ 0.5
SCN8A-206ENST00000550891 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
SCN8A-206ENST00000550891 STAG1Q8WVM7 1258 aa18.16■□□□□ 0.5
SCN8A-206ENST00000550891 NOL10Q9BSC4 688 aaKnown RBP18.16■□□□□ 0.5
SCN8A-206ENST00000550891 COL1A1P02452 1464 aaPredicted RBP18.16■□□□□ 0.5
SCN8A-206ENST00000550891 BBOX1O75936 387 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 NSUN4Q96CB9 384 aaKnown RBP18.15■□□□□ 0.5
SCN8A-206ENST00000550891 C8orf76Q96K31 380 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 ZSWIM5Q9P217 1185 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 GGA1Q9UJY5 639 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
SCN8A-206ENST00000550891 DYNLL1P63167 89 aaKnown RBP18.15■□□□□ 0.5
SCN8A-206ENST00000550891 GUCY1B3Q02153 619 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 TMED8Q6PL24 325 aaPredicted RBP18.15■□□□□ 0.5
SCN8A-206ENST00000550891 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
SCN8A-206ENST00000550891 ATP2B4P23634 1241 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 PRDX5P30044 214 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 CRY2Q49AN0 593 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 CCDC183Q5T5S1 534 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 ESR2Q92731 530 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 RIOK1Q9BRS2 568 aaKnown RBP18.15■□□□□ 0.5
SCN8A-206ENST00000550891 INCENPQ9NQS7 918 aa18.15■□□□□ 0.5
SCN8A-206ENST00000550891 AATFQ9NY61 560 aaKnown RBP eCLIP18.15■□□□□ 0.5
SCN8A-206ENST00000550891 GOLGA8AA7E2F4 631 aa18.14■□□□□ 0.49
SCN8A-206ENST00000550891 PLSCR1O15162 318 aa18.14■□□□□ 0.49
SCN8A-206ENST00000550891 FLAD1Q8NFF5 587 aa18.14■□□□□ 0.49
SCN8A-206ENST00000550891 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
SCN8A-206ENST00000550891 TCHHQ07283 1943 aa18.14■□□□□ 0.49
SCN8A-206ENST00000550891 LETM1O95202 739 aaPredicted RBP18.14■□□□□ 0.49
SCN8A-206ENST00000550891 WTAPQ15007 396 aa18.14■□□□□ 0.49
SCN8A-206ENST00000550891 APOA5Q6Q788 366 aa18.14■□□□□ 0.49
SCN8A-206ENST00000550891 PROM2Q8N271 834 aa18.14■□□□□ 0.49
SCN8A-206ENST00000550891 PANK2Q9BZ23 570 aa18.14■□□□□ 0.49
SCN8A-206ENST00000550891 SLC3A2P08195 630 aaKnown RBP18.13■□□□□ 0.49
SCN8A-206ENST00000550891 DDR1Q08345 913 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 RESTQ13127 1097 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 BRIP1Q9BX63 1249 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 TAOK2Q9UL54 1235 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 BRWD3Q6RI45 1802 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
SCN8A-206ENST00000550891 LIFRP42702 1097 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 ZNF396Q96N95 335 aaPredicted RBP18.13■□□□□ 0.49
SCN8A-206ENST00000550891 HPS5Q9UPZ3 1129 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 UBR3Q6ZT12 1888 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 C6orf229H3BNL8 230 aa18.13■□□□□ 0.49
SCN8A-206ENST00000550891 TNRC6CQ9HCJ0 1690 aaKnown RBP18.12■□□□□ 0.49
SCN8A-206ENST00000550891 ELP1O95163 1332 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 CASZ1Q86V15 1759 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 RXRAP19793 462 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 GSTO1P78417 241 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 GPSM2P81274 684 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 TTC6Q86TZ1 520 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 CCDC144CPQ8IYA2 1237 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 IGDCC4Q8TDY8 1250 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 SALL1Q9NSC2 1324 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 SGMS1Q86VZ5 419 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 ZKSCAN3Q9BRR0 538 aa18.12■□□□□ 0.49
SCN8A-206ENST00000550891 BICD2Q8TD16 824 aa18.11■□□□□ 0.49
SCN8A-206ENST00000550891 LY9Q9HBG7 655 aa18.11■□□□□ 0.49
SCN8A-206ENST00000550891 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
SCN8A-206ENST00000550891 TRIM29Q14134 588 aa18.11■□□□□ 0.49
SCN8A-206ENST00000550891 TMC4Q7Z404 712 aa18.11■□□□□ 0.49
SCN8A-206ENST00000550891 CRAMP1Q96RY5 1269 aa18.11■□□□□ 0.49
SCN8A-206ENST00000550891 TSPY26PQ9H489 355 aa18.11■□□□□ 0.49
SCN8A-206ENST00000550891 A0A1B0GUL6 1792 aa18.11■□□□□ 0.49
SCN8A-206ENST00000550891 RANBP6O60518 1105 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms