RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 TFAP4Q01664 338 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 POLA2Q14181 598 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 IFNL3Q8IZI9 196 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 TMEM63CQ9P1W3 806 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 CALML3P27482 149 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 KRT40Q6A162 431 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 KANK3Q6NY19 840 aa13.33□□□□□ -0.28
LGR5-206ENST00000550851 LEO1Q8WVC0 666 aaPredicted RBP13.33□□□□□ -0.28
LGR5-206ENST00000550851 ZYXQ15942 572 aaKnown RBP13.32□□□□□ -0.28
LGR5-206ENST00000550851 LETM2Q2VYF4 491 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 SMIM5Q71RC9 77 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 PI4K2BQ8TCG2 481 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 PATL2C9JE40 543 aaKnown RBP13.32□□□□□ -0.28
LGR5-206ENST00000550851 ECM2O94769 699 aaPredicted RBP13.32□□□□□ -0.28
LGR5-206ENST00000550851 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 ERFEQ4G0M1 354 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 GTF3C6Q969F1 213 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
LGR5-206ENST00000550851 C6orf50Q9HD87 102 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 STK32BQ9NY57 414 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.32□□□□□ -0.28
LGR5-206ENST00000550851 KCNQ2O43526 872 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 TDRD12Q587J7 1177 aaKnown RBP13.32□□□□□ -0.28
LGR5-206ENST00000550851 SUSD4Q5VX71 490 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
LGR5-206ENST00000550851 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 CAVIN2O95810 425 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 ASIC1P78348 528 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 CCDC181Q5TID7 509 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 ANO1Q5XXA6 986 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 PIK3AP1Q6ZUJ8 805 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
LGR5-206ENST00000550851 AMPD3Q01432 767 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 CCDC40Q4G0X9 1142 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 OSBP2Q969R2 916 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 LLPHQ9BRT6 129 aaKnown RBP13.31□□□□□ -0.28
LGR5-206ENST00000550851 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 H0YIN7 160 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
LGR5-206ENST00000550851 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
LGR5-206ENST00000550851 KIF18AQ8NI77 898 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 UBXN4Q92575 508 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 TSG101Q99816 390 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
LGR5-206ENST00000550851 MAST3O60307 1309 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 DEXIO95424 95 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 BMP15O95972 392 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 PARP1P09874 1014 aaKnown RBP13.3□□□□□ -0.28
LGR5-206ENST00000550851 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 H7C1W4 665 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 SCNN1DP51172 638 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 PPARAQ07869 468 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 ZNF397Q8NF99 534 aaPredicted RBP13.3□□□□□ -0.28
LGR5-206ENST00000550851 CDC42BPGQ6DT37 1551 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 PPP1R12BO60237 982 aaPredicted RBP13.3□□□□□ -0.28
LGR5-206ENST00000550851 SKILP12757 684 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 FAM160A1Q05DH4 1040 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 SMARCC2Q8TAQ2 1214 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 STAMQ92783 540 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 PUS7LQ9H0K6 701 aaKnown RBP13.3□□□□□ -0.28
LGR5-206ENST00000550851 MTMR6Q9Y217 621 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 GJA3Q9Y6H8 435 aa13.3□□□□□ -0.28
LGR5-206ENST00000550851 KIAA0825Q8IV33 1275 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 EXOC1Q9NV70 894 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
LGR5-206ENST00000550851 TTF2Q9UNY4 1162 aaKnown RBP13.29□□□□□ -0.28
LGR5-206ENST00000550851 MAPK8IP1Q9UQF2 711 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 PRKAB2O43741 272 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 ZMYM1Q5SVZ6 1142 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 PIK3C2BO00750 1634 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 JAKMIP3Q5VZ66 844 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 DTHD1Q6ZMT9 781 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 ZNF654Q8IZM8 581 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 C1orf167Q5SNV9 1468 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 SPA17Q15506 151 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 RILPL1Q5EBL4 403 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 FCHSD1Q86WN1 690 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 ZSWIM4Q9H7M6 989 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 MMRN2Q9H8L6 949 aa13.29□□□□□ -0.28
LGR5-206ENST00000550851 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
LGR5-206ENST00000550851 PTGS1P23219 599 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 POLD1P28340 1107 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 GNA11P29992 359 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 USP28Q96RU2 1077 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 IFNKQ9P0W0 207 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 PALLDQ8WX93 1383 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 SPDYE3A6NKU9 549 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 ZSCAN12O43309 604 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 LARGE1O95461 756 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 TNNT3P45378 269 aaPredicted RBP13.28□□□□□ -0.28
LGR5-206ENST00000550851 TEX35Q5T0J7 233 aa13.28□□□□□ -0.28
LGR5-206ENST00000550851 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms