RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 DYMQ7RTS9 669 aa9.48□□□□□ -0.89
GNPTAB-208ENST00000550718 FAM105AQ9NUU6 356 aa9.48□□□□□ -0.89
GNPTAB-208ENST00000550718 NFICP08651 508 aa9.47□□□□□ -0.89
GNPTAB-208ENST00000550718 ADMP35318 185 aa9.47□□□□□ -0.89
GNPTAB-208ENST00000550718 ASPAP45381 313 aa9.47□□□□□ -0.89
GNPTAB-208ENST00000550718 PPP2R3AQ06190 1150 aa9.47□□□□□ -0.89
GNPTAB-208ENST00000550718 SEZ6L2Q6UXD5 910 aa9.47□□□□□ -0.89
GNPTAB-208ENST00000550718 BIN2Q9UBW5 565 aaPredicted RBP9.47□□□□□ -0.89
GNPTAB-208ENST00000550718 AP4E1Q9UPM8 1137 aa9.47□□□□□ -0.89
GNPTAB-208ENST00000550718 SLFN14P0C7P3 912 aa9.46□□□□□ -0.9
GNPTAB-208ENST00000550718 PDE3AQ14432 1141 aa9.46□□□□□ -0.9
GNPTAB-208ENST00000550718 DTHD1Q6ZMT9 781 aa9.46□□□□□ -0.9
GNPTAB-208ENST00000550718 TMEM39AQ9NV64 488 aa9.46□□□□□ -0.9
GNPTAB-208ENST00000550718 PLCB3Q01970 1234 aa9.45□□□□□ -0.9
GNPTAB-208ENST00000550718 ENOX2Q16206 610 aaKnown RBP9.45□□□□□ -0.9
GNPTAB-208ENST00000550718 KIF4BQ2VIQ3 1234 aa9.45□□□□□ -0.9
GNPTAB-208ENST00000550718 DUSP27Q5VZP5 1158 aa9.45□□□□□ -0.9
GNPTAB-208ENST00000550718 BCO2Q9BYV7 579 aa9.45□□□□□ -0.9
GNPTAB-208ENST00000550718 CRIM1Q9NZV1 1036 aa9.45□□□□□ -0.9
GNPTAB-208ENST00000550718 TIMELESSQ9UNS1 1208 aa9.45□□□□□ -0.9
GNPTAB-208ENST00000550718 CYP26A1O43174 497 aa9.44□□□□□ -0.9
GNPTAB-208ENST00000550718 GSTP1P09211 210 aaKnown RBP9.44□□□□□ -0.9
GNPTAB-208ENST00000550718 RAB6AP20340 208 aa9.44□□□□□ -0.9
GNPTAB-208ENST00000550718 SHISA5Q8N114 240 aa9.44□□□□□ -0.9
GNPTAB-208ENST00000550718 FBF1Q8TES7 1133 aa9.44□□□□□ -0.9
GNPTAB-208ENST00000550718 C1GALT1Q9NS00 363 aa9.44□□□□□ -0.9
GNPTAB-208ENST00000550718 PPP1R9AQ9ULJ8 1098 aa9.44□□□□□ -0.9
GNPTAB-208ENST00000550718 TMPRSS2O15393 492 aa9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 FCGRTP55899 365 aa9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 VSIG10LQ86VR7 867 aa9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 SRCIN1Q9C0H9 1055 aa9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 ATXN3LQ9H3M9 355 aa9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 CCDC86Q9H6F5 360 aaKnown RBP9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 CCDC39Q9UFE4 941 aa9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 ANGEL1Q9UNK9 670 aaKnown RBP9.43□□□□□ -0.9
GNPTAB-208ENST00000550718 FAM170BA6NMN3 283 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 PAX4O43316 350 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 MAPK1P28482 360 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 ID3Q02535 119 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 OGFOD3Q6PK18 319 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 PDZD3Q86UT5 571 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 KRTAP1-3Q8IUG1 177 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 FBXL18Q96ME1 805 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
GNPTAB-208ENST00000550718 PNMA6FA0A0J9YX94 578 aa9.41□□□□□ -0.9
GNPTAB-208ENST00000550718 FMNL2Q96PY5 1086 aa9.41□□□□□ -0.9
GNPTAB-208ENST00000550718 ZNF862O60290 1169 aa9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 TAL1P17542 331 aaPredicted RBP9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 LIG1P18858 919 aa9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 PI16Q6UXB8 463 aa9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 ZNF765Q7L2R6 523 aa9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 ZSCAN29Q8IWY8 852 aaPredicted RBP9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 ANKRD24Q8TF21 1146 aa9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 WDR89Q96FK6 387 aaPredicted RBP9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 FANCD2OSQ96PS1 177 aa9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 KRTAP4-12Q9BQ66 201 aa9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 GPN3Q9UHW5 284 aaPredicted RBP9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 ADGRE2Q9UHX3 823 aa9.4□□□□□ -0.9
GNPTAB-208ENST00000550718 GIPC1O14908 333 aa9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 ZNF157P51786 506 aaPredicted RBP9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 KCNA1Q09470 495 aa9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 CYP27C1Q4G0S4 372 aa9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 NXPE4Q6UWF7 544 aa9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 C3orf58Q8NDZ4 430 aa9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 EMILIN2Q9BXX0 1053 aa9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 PPM1HQ9ULR3 514 aa9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 DAGLAQ9Y4D2 1042 aa9.39□□□□□ -0.91
GNPTAB-208ENST00000550718 NME2P22392 152 aa9.38□□□□□ -0.91
GNPTAB-208ENST00000550718 ARNTP27540 789 aa9.38□□□□□ -0.91
GNPTAB-208ENST00000550718 FMR1Q06787 632 aaKnown RBP eCLIP9.38□□□□□ -0.91
GNPTAB-208ENST00000550718 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
GNPTAB-208ENST00000550718 PIDD1Q9HB75 910 aa9.38□□□□□ -0.91
GNPTAB-208ENST00000550718 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
GNPTAB-208ENST00000550718 CACNA2D2Q9NY47 1150 aa9.38□□□□□ -0.91
GNPTAB-208ENST00000550718 DYNC1LI2O43237 492 aaPredicted RBP9.37□□□□□ -0.91
GNPTAB-208ENST00000550718 GSTT1P30711 240 aa9.37□□□□□ -0.91
GNPTAB-208ENST00000550718 SCARA3Q6AZY7 606 aa9.37□□□□□ -0.91
GNPTAB-208ENST00000550718 NFXL1Q6ZNB6 911 aa9.37□□□□□ -0.91
GNPTAB-208ENST00000550718 SULF2Q8IWU5 870 aa9.37□□□□□ -0.91
GNPTAB-208ENST00000550718 ZNF252P-AS1Q0IIN9 211 aa9.36□□□□□ -0.91
GNPTAB-208ENST00000550718 ALG1LQ6GMV1 187 aa9.36□□□□□ -0.91
GNPTAB-208ENST00000550718 SMYD4Q8IYR2 804 aaPredicted RBP9.36□□□□□ -0.91
GNPTAB-208ENST00000550718 CEP44Q9C0F1 390 aa9.36□□□□□ -0.91
GNPTAB-208ENST00000550718 AKAP2Q9Y2D5 859 aa9.36□□□□□ -0.91
GNPTAB-208ENST00000550718 TXKP42681 527 aa9.35□□□□□ -0.91
GNPTAB-208ENST00000550718 ERVK-24P63145 666 aa9.35□□□□□ -0.91
GNPTAB-208ENST00000550718 ZC3H12AQ5D1E8 599 aaKnown RBP9.35□□□□□ -0.91
GNPTAB-208ENST00000550718 ABI1Q8IZP0 508 aa9.35□□□□□ -0.91
GNPTAB-208ENST00000550718 AGBL5Q8NDL9 886 aa9.35□□□□□ -0.91
GNPTAB-208ENST00000550718 NECAB3Q96P71 396 aaPredicted RBP9.35□□□□□ -0.91
GNPTAB-208ENST00000550718 ZC3H12CQ9C0D7 883 aaKnown RBP9.35□□□□□ -0.91
GNPTAB-208ENST00000550718 ZC3H7BQ9UGR2 993 aaKnown RBP9.35□□□□□ -0.91
GNPTAB-208ENST00000550718 CBLL1Q75N03 491 aa9.34□□□□□ -0.91
GNPTAB-208ENST00000550718 KCNB2Q92953 911 aa9.34□□□□□ -0.91
GNPTAB-208ENST00000550718 PCOLCE2Q9UKZ9 415 aa9.34□□□□□ -0.91
GNPTAB-208ENST00000550718 SAMM50Q9Y512 469 aa9.34□□□□□ -0.91
GNPTAB-208ENST00000550718 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
GNPTAB-208ENST00000550718 TTLL4Q14679 1199 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms