RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 C19orf44Q9H6X5 657 aa17.29■□□□□ 0.36
PDE1B-207ENST00000550620 FBXO3Q9UK99 471 aa17.29■□□□□ 0.36
PDE1B-207ENST00000550620 TRIM29Q14134 588 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 PTPAQ15257 358 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 BAG1Q99933 345 aaPredicted RBP17.28■□□□□ 0.36
PDE1B-207ENST00000550620 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.28■□□□□ 0.36
PDE1B-207ENST00000550620 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.28■□□□□ 0.36
PDE1B-207ENST00000550620 ANGEL1Q9UNK9 670 aaKnown RBP17.28■□□□□ 0.36
PDE1B-207ENST00000550620 MEGF6O75095 1541 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
PDE1B-207ENST00000550620 STX10O60499 249 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 KRT40Q6A162 431 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 ZNF594Q96JF6 807 aaPredicted RBP17.28■□□□□ 0.36
PDE1B-207ENST00000550620 FANCLQ9NW38 375 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 DACH1Q9UI36 760 aa17.28■□□□□ 0.36
PDE1B-207ENST00000550620 ZC3H6P61129 1189 aaKnown RBP17.27■□□□□ 0.36
PDE1B-207ENST00000550620 TMEM139Q8IV31 216 aa17.27■□□□□ 0.36
PDE1B-207ENST00000550620 GNG11P61952 73 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 TXLNBQ8N3L3 684 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 MAP3K14Q99558 947 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.26■□□□□ 0.35
PDE1B-207ENST00000550620 MAP3K15Q6ZN16 1313 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 TMEM232C9JQI7 657 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 GPAA1O43292 621 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 PPP2R3AQ06190 1150 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 GPS2Q13227 327 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 CCDC57Q2TAC2 916 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 METTL16Q86W50 562 aaKnown RBP17.26■□□□□ 0.35
PDE1B-207ENST00000550620 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 KCNH3Q9ULD8 1083 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 MST1RQ04912 1400 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 LAMB4A4D0S4 1761 aa17.26■□□□□ 0.35
PDE1B-207ENST00000550620 NWD2Q9ULI1 1742 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 FANCGO15287 622 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 TBX2Q13207 712 aaPredicted RBP17.25■□□□□ 0.35
PDE1B-207ENST00000550620 JAKMIP3Q5VZ66 844 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 PUS7LQ9H0K6 701 aaKnown RBP17.25■□□□□ 0.35
PDE1B-207ENST00000550620 PCDHA5Q9Y5H7 936 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 MRFAP1Q9Y605 127 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 CYP27B1O15528 508 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 CDK11BP21127 795 aaKnown RBP17.25■□□□□ 0.35
PDE1B-207ENST00000550620 LONRF3Q496Y0 759 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 SPECC1LQ69YQ0 1117 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
PDE1B-207ENST00000550620 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
PDE1B-207ENST00000550620 PUS3Q9BZE2 481 aaKnown RBP17.25■□□□□ 0.35
PDE1B-207ENST00000550620 UBXN6Q9BZV1 441 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 ARFGAP3Q9NP61 516 aa17.25■□□□□ 0.35
PDE1B-207ENST00000550620 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
PDE1B-207ENST00000550620 NBPF26B4DH59 902 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 SH2B2O14492 632 aaPredicted RBP17.24■□□□□ 0.35
PDE1B-207ENST00000550620 NBPF14Q5TI25 921 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 NBPF10Q6P3W6 841 aaKnown RBP17.24■□□□□ 0.35
PDE1B-207ENST00000550620 TTLL7Q6ZT98 887 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 NBPF15Q8N660 670 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 PDILTQ8N807 584 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 TSPYL1Q9H0U9 437 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
PDE1B-207ENST00000550620 POLR3GO15318 223 aaPredicted RBP17.23■□□□□ 0.35
PDE1B-207ENST00000550620 SEC31AO94979 1220 aaKnown RBP17.23■□□□□ 0.35
PDE1B-207ENST00000550620 TBC1D8O95759 1140 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 IARSP41252 1262 aaKnown RBP17.23■□□□□ 0.35
PDE1B-207ENST00000550620 ZAP70P43403 619 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 KRI1Q8N9T8 703 aaKnown RBP17.23■□□□□ 0.35
PDE1B-207ENST00000550620 MLKLQ8NB16 471 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 GOLGA1Q92805 767 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 TMEM87BQ96K49 555 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 INTS13Q9NVM9 706 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 DDX60Q8IY21 1712 aaKnown RBP17.23■□□□□ 0.35
PDE1B-207ENST00000550620 ADORA1P30542 326 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 IRX5P78411 483 aaPredicted RBP17.23■□□□□ 0.35
PDE1B-207ENST00000550620 GOLGA8FQ08AF8 430 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 GOLGA8DPQ0D2H9 430 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 RSRC2Q7L4I2 434 aaKnown RBP17.23■□□□□ 0.35
PDE1B-207ENST00000550620 AIFM3Q96NN9 605 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 CLIC6Q96NY7 704 aa17.23■□□□□ 0.35
PDE1B-207ENST00000550620 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDE1B-207ENST00000550620 ZBTB43O43298 467 aa17.22■□□□□ 0.35
PDE1B-207ENST00000550620 OAS2P29728 719 aaKnown RBP17.22■□□□□ 0.35
PDE1B-207ENST00000550620 HNRNPH2P55795 449 aaKnown RBP17.22■□□□□ 0.35
PDE1B-207ENST00000550620 SMC1AQ14683 1233 aaKnown RBP17.22■□□□□ 0.35
PDE1B-207ENST00000550620 APOA5Q6Q788 366 aa17.22■□□□□ 0.35
PDE1B-207ENST00000550620 TRIML1Q8N9V2 468 aa17.22■□□□□ 0.35
PDE1B-207ENST00000550620 ENOX1Q8TC92 643 aaKnown RBP17.22■□□□□ 0.35
PDE1B-207ENST00000550620 TMEM51Q9NW97 253 aa17.22■□□□□ 0.35
PDE1B-207ENST00000550620 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
PDE1B-207ENST00000550620 TULP2O00295 520 aa17.22■□□□□ 0.35
PDE1B-207ENST00000550620 TC2NQ8N9U0 490 aa17.22■□□□□ 0.35
PDE1B-207ENST00000550620 WASF1Q92558 559 aa17.22■□□□□ 0.35
PDE1B-207ENST00000550620 TJP1Q07157 1748 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 GLI3P10071 1580 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 PDE4BQ07343 736 aa17.21■□□□□ 0.35
PDE1B-207ENST00000550620 POSTNQ15063 836 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms