RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 BCL7CQ8WUZ0 217 aaPredicted RBP5.47□□□□□ -1.53
CCNT1-203ENST00000550457 WDR89Q96FK6 387 aaPredicted RBP5.47□□□□□ -1.53
CCNT1-203ENST00000550457 EHD4Q9H223 541 aa5.47□□□□□ -1.53
CCNT1-203ENST00000550457 TUT1Q9H6E5 874 aaKnown RBP5.47□□□□□ -1.53
CCNT1-203ENST00000550457 ABCB6Q9NP58 842 aa5.47□□□□□ -1.53
CCNT1-203ENST00000550457 NPHS2Q9NP85 383 aa5.47□□□□□ -1.53
CCNT1-203ENST00000550457 PAPLNO95428 1278 aa5.46□□□□□ -1.54
CCNT1-203ENST00000550457 IGHA2P01877 340 aa5.46□□□□□ -1.54
CCNT1-203ENST00000550457 FAAP100Q0VG06 881 aa5.46□□□□□ -1.54
CCNT1-203ENST00000550457 PDE3AQ14432 1141 aa5.46□□□□□ -1.54
CCNT1-203ENST00000550457 FAM129BQ96TA1 746 aa5.46□□□□□ -1.54
CCNT1-203ENST00000550457 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
CCNT1-203ENST00000550457 CCDC86Q9H6F5 360 aaKnown RBP5.46□□□□□ -1.54
CCNT1-203ENST00000550457 ZFYVE1Q9HBF4 777 aa5.46□□□□□ -1.54
CCNT1-203ENST00000550457 U3KQE9 123 aa5.46□□□□□ -1.54
CCNT1-203ENST00000550457 TMPRSS2O15393 492 aa5.45□□□□□ -1.54
CCNT1-203ENST00000550457 JUNBP17275 347 aaPredicted RBP5.45□□□□□ -1.54
CCNT1-203ENST00000550457 LIG1P18858 919 aa5.45□□□□□ -1.54
CCNT1-203ENST00000550457 JAG1P78504 1218 aa5.45□□□□□ -1.54
CCNT1-203ENST00000550457 PRPF40BQ6NWY9 871 aaKnown RBP5.45□□□□□ -1.54
CCNT1-203ENST00000550457 GLYCTKQ8IVS8 523 aa5.45□□□□□ -1.54
CCNT1-203ENST00000550457 POU5F2Q8N7G0 328 aa5.45□□□□□ -1.54
CCNT1-203ENST00000550457 AGBL5Q8NDL9 886 aa5.45□□□□□ -1.54
CCNT1-203ENST00000550457 DDX54Q8TDD1 881 aaKnown RBP5.45□□□□□ -1.54
CCNT1-203ENST00000550457 ASIC4Q96FT7 647 aa5.45□□□□□ -1.54
CCNT1-203ENST00000550457 SYNGAP1Q96PV0 1343 aa5.45□□□□□ -1.54
CCNT1-203ENST00000550457 TMEM238LA0A1B0GVL6 79 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 GPR182O15218 404 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 ZNF862O60290 1169 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 CPNE3O75131 537 aaKnown RBP5.44□□□□□ -1.54
CCNT1-203ENST00000550457 C8AP07357 584 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 ZNF157P51786 506 aaPredicted RBP5.44□□□□□ -1.54
CCNT1-203ENST00000550457 PTPN12Q05209 780 aaKnown RBP5.44□□□□□ -1.54
CCNT1-203ENST00000550457 BNIP3Q12983 259 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 CDK5R2Q13319 367 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 AP3B2Q13367 1082 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 FAM181AQ8N9Y4 354 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 GLIS3Q8NEA6 775 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 CCDC74AQ96AQ1 378 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 ZC3H12CQ9C0D7 883 aaKnown RBP5.44□□□□□ -1.54
CCNT1-203ENST00000550457 CRIM1Q9NZV1 1036 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 SLC5A6Q9Y289 635 aa5.44□□□□□ -1.54
CCNT1-203ENST00000550457 EIF1AYO14602 144 aaKnown RBP5.43□□□□□ -1.54
CCNT1-203ENST00000550457 NDUFB5O43674 189 aa5.43□□□□□ -1.54
CCNT1-203ENST00000550457 NEFLP07196 543 aa5.43□□□□□ -1.54
CCNT1-203ENST00000550457 RPS26P11Q5JNZ5 115 aaPredicted RBP5.43□□□□□ -1.54
CCNT1-203ENST00000550457 PLD6Q8N2A8 252 aaKnown RBP5.43□□□□□ -1.54
CCNT1-203ENST00000550457 FANCD2OSQ96PS1 177 aa5.43□□□□□ -1.54
CCNT1-203ENST00000550457 DISC1Q9NRI5 854 aa5.43□□□□□ -1.54
CCNT1-203ENST00000550457 PCDHGC5Q9Y5F6 944 aa5.43□□□□□ -1.54
CCNT1-203ENST00000550457 CARMIL2Q6F5E8 1435 aa5.42□□□□□ -1.54
CCNT1-203ENST00000550457 FAM87AP0C7U9 286 aa5.42□□□□□ -1.54
CCNT1-203ENST00000550457 PDE3BQ13370 1112 aa5.42□□□□□ -1.54
CCNT1-203ENST00000550457 GRM2Q14416 872 aa5.42□□□□□ -1.54
CCNT1-203ENST00000550457 PLCL1Q15111 1095 aa5.42□□□□□ -1.54
CCNT1-203ENST00000550457 ZNF792Q3KQV3 632 aa5.42□□□□□ -1.54
CCNT1-203ENST00000550457 EPS8L3Q8TE67 593 aaKnown RBP5.42□□□□□ -1.54
CCNT1-203ENST00000550457 USTQ9Y2C2 406 aa5.42□□□□□ -1.54
CCNT1-203ENST00000550457 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
CCNT1-203ENST00000550457 LEFTY1O75610 366 aa5.41□□□□□ -1.54
CCNT1-203ENST00000550457 CD96P40200 585 aa5.41□□□□□ -1.54
CCNT1-203ENST00000550457 ID3Q02535 119 aa5.41□□□□□ -1.54
CCNT1-203ENST00000550457 STK11IPQ8N1F8 1099 aa5.41□□□□□ -1.54
CCNT1-203ENST00000550457 NIF3L1Q9GZT8 377 aa5.41□□□□□ -1.54
CCNT1-203ENST00000550457 ADAMTS6Q9UKP5 1117 aa5.41□□□□□ -1.54
CCNT1-203ENST00000550457 GADD45BO75293 160 aaPredicted RBP5.4□□□□□ -1.54
CCNT1-203ENST00000550457 GSTP1P09211 210 aaKnown RBP5.4□□□□□ -1.54
CCNT1-203ENST00000550457 CD8BP10966 210 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 KIF4BQ2VIQ3 1234 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 CYP27C1Q4G0S4 372 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 PDZD3Q86UT5 571 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 STK35Q8TDR2 534 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 CITED4Q96RK1 184 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 DNAJC25Q9H1X3 360 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 ATXN3LQ9H3M9 355 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 PIDD1Q9HB75 910 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 MBNL3Q9NUK0 354 aaKnown RBP5.4□□□□□ -1.54
CCNT1-203ENST00000550457 GTF3C3Q9Y5Q9 886 aa5.4□□□□□ -1.54
CCNT1-203ENST00000550457 NEFMP07197 916 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 HCLS1P14317 486 aaPredicted RBP5.39□□□□□ -1.55
CCNT1-203ENST00000550457 FUT4P22083 530 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 TTLL4Q14679 1199 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 ZNF648Q5T619 568 aaPredicted RBP5.39□□□□□ -1.55
CCNT1-203ENST00000550457 PI16Q6UXB8 463 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 TXNDC2Q86VQ3 553 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 SMYD4Q8IYR2 804 aaPredicted RBP5.39□□□□□ -1.55
CCNT1-203ENST00000550457 NETO1Q8TDF5 533 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 MISP3Q96FF7 219 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 KRT82Q9NSB4 513 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 TRAK1Q9UPV9 953 aa5.39□□□□□ -1.55
CCNT1-203ENST00000550457 RNASE1P07998 156 aaKnown RBP5.38□□□□□ -1.55
CCNT1-203ENST00000550457 SLFN14P0C7P3 912 aa5.38□□□□□ -1.55
CCNT1-203ENST00000550457 B4GALNT3Q6L9W6 998 aa5.38□□□□□ -1.55
CCNT1-203ENST00000550457 CSRNP1Q96S65 589 aa5.38□□□□□ -1.55
CCNT1-203ENST00000550457 DUSP23Q9BVJ7 150 aa5.38□□□□□ -1.55
CCNT1-203ENST00000550457 PLAGL2Q9UPG8 496 aa5.38□□□□□ -1.55
CCNT1-203ENST00000550457 RNGTTO60942 597 aaKnown RBP5.37□□□□□ -1.55
CCNT1-203ENST00000550457 OXCT1P55809 520 aa5.37□□□□□ -1.55
CCNT1-203ENST00000550457 FCGRTP55899 365 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms