RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 LAMA4Q16363 1823 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 IQCA1LA6NCM1 817 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 PATL2C9JE40 543 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 F8W031 263 aaPredicted RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 NPM3O75607 178 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 APPP05067 770 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 SLC3A2P08195 630 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 PCP11498 1178 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 BTDP43251 543 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 ZNF280AP59817 542 aaPredicted RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 TNFAIP1Q13829 316 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 KRT32Q14532 448 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 DLGAP5Q15398 846 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 ALX1Q15699 326 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 IMMTQ16891 758 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 FKBP1CQ5VVH2 108 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 MAP4K1Q92918 833 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 STRBPQ96SI9 672 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 RIOK1Q9BRS2 568 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 PUS7LQ9H0K6 701 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 ZNF287Q9HBT7 754 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 AATFQ9NY61 560 aaKnown RBP eCLIP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 DAGLAQ9Y4D2 1042 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 GJA3Q9Y6H8 435 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 SLC4A4Q9Y6R1 1079 aa8.53□□□□□ -1.04
CALCOCO1-215ENST00000549688 NAV1Q8NEY1 1877 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 SPDYE2BA6NHP3 402 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 M0R2C6 588 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 SPDYE6P0CI01 402 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 HSPD1P10809 573 aaKnown RBP8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 USP5P45974 858 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 TDO2P48775 406 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 RBM25P49756 843 aaKnown RBP8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 GMPSP49915 693 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 CFAP100Q494V2 611 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 ZNF589Q86UQ0 364 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 TEX11Q8IYF3 940 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 MIGA1Q8NAN2 632 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 L3MBTL3Q96JM7 780 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 USP26Q9BXU7 913 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 C22orf23Q9BZE7 217 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 LSG1Q9H089 658 aaKnown RBP8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 NAPBQ9H115 298 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 MYOZ2Q9NPC6 264 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 KCNQ5Q9NR82 932 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 ZNF541Q9H0D2 1346 aa8.52□□□□□ -1.05
CALCOCO1-215ENST00000549688 COL2A1P02458 1487 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 CDK5RAP2Q96SN8 1893 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 LAMB1P07942 1786 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 GLTPD2A6NH11 291 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 ZNF213O14771 459 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 HMGB1P09429 215 aaKnown RBP8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 HSPA4P34932 840 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 TNNI2P48788 182 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 SCNN1DP51172 638 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 ADGRA1Q86SQ6 560 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 MICALL2Q8IY33 904 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 LCORLQ8N3X6 602 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 ZNF384Q8TF68 577 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 HOOK2Q96ED9 719 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 SEC62Q99442 399 aaKnown RBP8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 IDI2Q9BXS1 227 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 DHX36Q9H2U1 1008 aaKnown RBP8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 RNF41Q9H4P4 317 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 CNNM2Q9H8M5 875 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 ARMT1Q9H993 441 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 USP40Q9NVE5 1235 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 GPRC5DQ9NZD1 345 aa8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 CNOT7Q9UIV1 285 aaKnown RBP8.51□□□□□ -1.05
CALCOCO1-215ENST00000549688 ENTPD3O75355 529 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 PSMA5P28066 241 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 PRELPP51888 382 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 TRDNQ13061 729 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 TSGA10IPQ3SY00 556 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 SBK1Q52WX2 424 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 APOBEC3HQ6NTF7 200 aaKnown RBP8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 CCDC129Q6ZRS4 1044 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 TTC6Q86TZ1 520 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 PNMA8AQ86V59 439 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 APOBEC3FQ8IUX4 373 aaKnown RBP8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 IFNL3Q8IZI9 196 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 SH3RF3Q8TEJ3 882 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 WDR90Q96KV7 1748 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 TBC1D32Q96NH3 1257 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 MXD3Q9BW11 206 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 ADARB2Q9NS39 739 aaKnown RBP8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 ZBTB12Q9Y330 459 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 RBM8AQ9Y5S9 174 aaKnown RBP8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 MYH1P12882 1939 aa8.5□□□□□ -1.05
CALCOCO1-215ENST00000549688 GSG1L2A8MUP6 293 aa8.49□□□□□ -1.05
CALCOCO1-215ENST00000549688 FGAP02671 866 aa8.49□□□□□ -1.05
CALCOCO1-215ENST00000549688 HLA-DOAP06340 250 aa8.49□□□□□ -1.05
CALCOCO1-215ENST00000549688 RHBDL3P58872 404 aa8.49□□□□□ -1.05
CALCOCO1-215ENST00000549688 PDE4BQ07343 736 aa8.49□□□□□ -1.05
CALCOCO1-215ENST00000549688 NECTIN1Q15223 517 aa8.49□□□□□ -1.05
CALCOCO1-215ENST00000549688 GRIK5Q16478 980 aa8.49□□□□□ -1.05
CALCOCO1-215ENST00000549688 KIF4BQ2VIQ3 1234 aa8.49□□□□□ -1.05
CALCOCO1-215ENST00000549688 SPDYE2Q495Y8 402 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms