RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
UBE2N-203ENST00000549490 FAM84BQ96KN1 310 aaPredicted RBP11.38□□□□□ -0.59
UBE2N-203ENST00000549490 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
UBE2N-203ENST00000549490 CRISPLD2Q9H0B8 497 aa11.38□□□□□ -0.59
UBE2N-203ENST00000549490 ZMYND8Q9ULU4 1186 aaPredicted RBP11.38□□□□□ -0.59
UBE2N-203ENST00000549490 CYP2C8P10632 490 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
UBE2N-203ENST00000549490 DCAF15Q66K64 600 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 GPAT2Q6NUI2 795 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 LDHAL6AQ6ZMR3 332 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 MIGA2Q7L4E1 593 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 C7orf61Q8IZ16 206 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 DIS3LQ8TF46 1054 aaKnown RBP11.37□□□□□ -0.59
UBE2N-203ENST00000549490 ZNF341Q9BYN7 854 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 MYH16Q9H6N6 1097 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 PAK6Q9NQU5 681 aaPredicted RBP11.37□□□□□ -0.59
UBE2N-203ENST00000549490 CHMP3Q9Y3E7 222 aa11.37□□□□□ -0.59
UBE2N-203ENST00000549490 APAF1O14727 1248 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 SLC4A2P04920 1241 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 UBE4AQ14139 1066 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 FKBP1CQ5VVH2 108 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 APOBEC3HQ6NTF7 200 aaKnown RBP11.36□□□□□ -0.59
UBE2N-203ENST00000549490 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBE2N-203ENST00000549490 LINS1Q8NG48 757 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 PXYLP1Q8TE99 480 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 TEKT1Q969V4 418 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 ZDHHC15Q96MV8 337 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 PARK7Q99497 189 aaKnown RBP11.36□□□□□ -0.59
UBE2N-203ENST00000549490 CNNM1Q9NRU3 951 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 ZNF112Q9UJU3 913 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 MYH3P11055 1940 aa11.36□□□□□ -0.59
UBE2N-203ENST00000549490 SYN1P17600 705 aa11.35□□□□□ -0.59
UBE2N-203ENST00000549490 MAGEA10P43363 369 aaPredicted RBP11.35□□□□□ -0.59
UBE2N-203ENST00000549490 IRF5Q13568 498 aa11.35□□□□□ -0.59
UBE2N-203ENST00000549490 EPHA10Q5JZY3 1008 aa11.35□□□□□ -0.59
UBE2N-203ENST00000549490 LMBR1LQ6UX01 489 aa11.35□□□□□ -0.59
UBE2N-203ENST00000549490 TDHQ8IZJ6 230 aa11.35□□□□□ -0.59
UBE2N-203ENST00000549490 DNAAF4Q8WXU2 420 aa11.35□□□□□ -0.59
UBE2N-203ENST00000549490 MRIQ9BWK5 157 aa11.35□□□□□ -0.59
UBE2N-203ENST00000549490 TMOD2Q9NZR1 351 aa11.35□□□□□ -0.59
UBE2N-203ENST00000549490 SPTBN5Q9NRC6 3674 aaKnown RBP11.35□□□□□ -0.59
UBE2N-203ENST00000549490 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
UBE2N-203ENST00000549490 VCANP13611 3396 aa11.34□□□□□ -0.59
UBE2N-203ENST00000549490 CXCL11O14625 94 aa11.34□□□□□ -0.59
UBE2N-203ENST00000549490 FLIIQ13045 1269 aa11.34□□□□□ -0.59
UBE2N-203ENST00000549490 CHAF1AQ13111 956 aaPredicted RBP11.34□□□□□ -0.59
UBE2N-203ENST00000549490 CCDC57Q2TAC2 916 aa11.34□□□□□ -0.59
UBE2N-203ENST00000549490 TAF7LQ5H9L4 462 aa11.34□□□□□ -0.59
UBE2N-203ENST00000549490 FBXO33Q7Z6M2 555 aa11.34□□□□□ -0.59
UBE2N-203ENST00000549490 TSR2Q969E8 191 aaKnown RBP11.34□□□□□ -0.59
UBE2N-203ENST00000549490 IQSEC3Q9UPP2 1182 aaPredicted RBP11.34□□□□□ -0.59
UBE2N-203ENST00000549490 ARAP2Q8WZ64 1704 aa11.34□□□□□ -0.59
UBE2N-203ENST00000549490 RPAP1Q9BWH6 1393 aaPredicted RBP11.33□□□□□ -0.6
UBE2N-203ENST00000549490 TNPO2O14787 897 aaKnown RBP11.33□□□□□ -0.6
UBE2N-203ENST00000549490 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
UBE2N-203ENST00000549490 NOL9Q5SY16 702 aaKnown RBP11.33□□□□□ -0.6
UBE2N-203ENST00000549490 TBC1D22AQ8WUA7 517 aa11.33□□□□□ -0.6
UBE2N-203ENST00000549490 FAM151AQ8WW52 585 aa11.33□□□□□ -0.6
UBE2N-203ENST00000549490 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.33□□□□□ -0.66e-9■■■■□ 22.2
UBE2N-203ENST00000549490 TWISTNBQ3B726 338 aaPredicted RBP11.32□□□□□ -0.6
UBE2N-203ENST00000549490 ANKLE1Q8NAG6 615 aa11.32□□□□□ -0.6
UBE2N-203ENST00000549490 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
UBE2N-203ENST00000549490 UBE2OQ9C0C9 1292 aaKnown RBP11.32□□□□□ -0.6
UBE2N-203ENST00000549490 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
UBE2N-203ENST00000549490 TAOK2Q9UL54 1235 aa11.32□□□□□ -0.6
UBE2N-203ENST00000549490 RPTORQ8N122 1335 aa11.32□□□□□ -0.6
UBE2N-203ENST00000549490 A0A0G2JLL6 359 aaPredicted RBP11.31□□□□□ -0.6
UBE2N-203ENST00000549490 FRAT2O75474 233 aaPredicted RBP11.31□□□□□ -0.6
UBE2N-203ENST00000549490 TCP10Q12799 353 aa11.31□□□□□ -0.6
UBE2N-203ENST00000549490 FASTKD5Q7L8L6 764 aaKnown RBP11.31□□□□□ -0.6
UBE2N-203ENST00000549490 PRRT2Q7Z6L0 340 aaPredicted RBP11.31□□□□□ -0.6
UBE2N-203ENST00000549490 VPS37DQ86XT2 251 aa11.31□□□□□ -0.6
UBE2N-203ENST00000549490 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
UBE2N-203ENST00000549490 TTC28Q96AY4 2481 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 BEND3Q5T5X7 828 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 HHIPL2Q6UWX4 724 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 GADL1Q6ZQY3 521 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 COA7Q96BR5 231 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 C11orf49Q9H6J7 331 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 PRDM6Q9NQX0 595 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 ZHX2Q9Y6X8 837 aa11.3□□□□□ -0.6
UBE2N-203ENST00000549490 F6X3S4 739 aa11.29□□□□□ -0.6
UBE2N-203ENST00000549490 NFIAQ12857 509 aa11.29□□□□□ -0.6
UBE2N-203ENST00000549490 TRIM32Q13049 653 aa11.29□□□□□ -0.6
UBE2N-203ENST00000549490 FAM109BQ6ICB4 259 aaPredicted RBP11.29□□□□□ -0.6
UBE2N-203ENST00000549490 SLC45A1Q9Y2W3 748 aa11.29□□□□□ -0.6
UBE2N-203ENST00000549490 SUGT1Q9Y2Z0 365 aa11.29□□□□□ -0.6
UBE2N-203ENST00000549490 AFG3L2Q9Y4W6 797 aa11.29□□□□□ -0.6
UBE2N-203ENST00000549490 MAST3O60307 1309 aa11.29□□□□□ -0.6
UBE2N-203ENST00000549490 A0A1B0GUL6 1792 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 PHF20L1A8MW92 1017 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 GRM8O00222 908 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 HMGCRP04035 888 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 PTPRAP18433 802 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 CDC42EP5Q6NZY7 148 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 ANKRD13CQ8N6S4 541 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms