RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
DDX54-206ENST00000549271 MTMR10Q9NXD2 777 aa15.47■□□□□ 0.07
DDX54-206ENST00000549271 LAMA2P24043 3122 aaKnown RBP15.47■□□□□ 0.07
DDX54-206ENST00000549271 FANCIQ9NVI1 1328 aa15.46■□□□□ 0.07
DDX54-206ENST00000549271 ANKRD18BA2A2Z9 1011 aa15.46■□□□□ 0.07
DDX54-206ENST00000549271 PDHXO00330 501 aa15.46■□□□□ 0.07
DDX54-206ENST00000549271 VAMP4O75379 141 aa15.46■□□□□ 0.07
DDX54-206ENST00000549271 PPATQ06203 517 aa15.46■□□□□ 0.07
DDX54-206ENST00000549271 FKBP5Q13451 457 aaPredicted RBP15.46■□□□□ 0.07
DDX54-206ENST00000549271 LRIT3Q3SXY7 679 aa15.46■□□□□ 0.07
DDX54-206ENST00000549271 SPTBN5Q9NRC6 3674 aaKnown RBP15.46■□□□□ 0.06
DDX54-206ENST00000549271 BCRP11274 1271 aa15.45■□□□□ 0.06
DDX54-206ENST00000549271 CRKP46108 304 aa15.45■□□□□ 0.06
DDX54-206ENST00000549271 MOGSQ13724 837 aa15.45■□□□□ 0.06
DDX54-206ENST00000549271 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
DDX54-206ENST00000549271 TDRD7Q8NHU6 1098 aaKnown RBP15.45■□□□□ 0.06
DDX54-206ENST00000549271 GABRQQ9UN88 632 aa15.45■□□□□ 0.06
DDX54-206ENST00000549271 EYSQ5T1H1 3165 aa15.44■□□□□ 0.06
DDX54-206ENST00000549271 CRISPLD2Q9H0B8 497 aa15.44■□□□□ 0.06
DDX54-206ENST00000549271 PAK6Q9NQU5 681 aaPredicted RBP15.44■□□□□ 0.06
DDX54-206ENST00000549271 KCNH4Q9UQ05 1017 aa15.44■□□□□ 0.06
DDX54-206ENST00000549271 DOCK3Q8IZD9 2030 aa15.43■□□□□ 0.06
DDX54-206ENST00000549271 ADCY3O60266 1144 aa15.43■□□□□ 0.06
DDX54-206ENST00000549271 TFRCP02786 760 aaKnown RBP15.43■□□□□ 0.06
DDX54-206ENST00000549271 BCAMP50895 628 aa15.43■□□□□ 0.06
DDX54-206ENST00000549271 FCGRTP55899 365 aa15.43■□□□□ 0.06
DDX54-206ENST00000549271 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.43■□□□□ 0.06
DDX54-206ENST00000549271 PAWRQ96IZ0 340 aaKnown RBP15.43■□□□□ 0.06
DDX54-206ENST00000549271 DEFB118Q96PH6 123 aa15.43■□□□□ 0.06
DDX54-206ENST00000549271 INHAP05111 366 aa15.42■□□□□ 0.06
DDX54-206ENST00000549271 CACNB3P54284 484 aa15.42■□□□□ 0.06
DDX54-206ENST00000549271 EXOSC9Q06265 439 aaKnown RBP15.42■□□□□ 0.06
DDX54-206ENST00000549271 FAM83AQ86UY5 434 aa15.42■□□□□ 0.06
DDX54-206ENST00000549271 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
DDX54-206ENST00000549271 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
DDX54-206ENST00000549271 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
DDX54-206ENST00000549271 RPAP1Q9BWH6 1393 aaPredicted RBP15.41■□□□□ 0.06
DDX54-206ENST00000549271 ELNP15502 786 aa15.41■□□□□ 0.06
DDX54-206ENST00000549271 FOXO4P98177 505 aa15.41■□□□□ 0.06
DDX54-206ENST00000549271 HDLBPQ00341 1268 aaKnown RBP15.41■□□□□ 0.06
DDX54-206ENST00000549271 IFIT5Q13325 482 aaKnown RBP15.41■□□□□ 0.06
DDX54-206ENST00000549271 GRIK5Q16478 980 aa15.41■□□□□ 0.06
DDX54-206ENST00000549271 BEND3Q5T5X7 828 aa15.41■□□□□ 0.06
DDX54-206ENST00000549271 FKBP1CQ5VVH2 108 aa15.41■□□□□ 0.06
DDX54-206ENST00000549271 PRUNE2Q8WUY3 3088 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 INPP5BP32019 993 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 FLT3LGP49771 235 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 IRF5Q13568 498 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 DCAF15Q66K64 600 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 GPAT2Q6NUI2 795 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 NECAB2Q7Z6G3 386 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 C7orf61Q8IZ16 206 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 TDHQ8IZJ6 230 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 DIS3LQ8TF46 1054 aaKnown RBP15.4■□□□□ 0.06
DDX54-206ENST00000549271 PARK7Q99497 189 aaKnown RBP15.4■□□□□ 0.06
DDX54-206ENST00000549271 ZNF341Q9BYN7 854 aa15.4■□□□□ 0.06
DDX54-206ENST00000549271 ZMYND8Q9ULU4 1186 aaPredicted RBP15.4■□□□□ 0.06
DDX54-206ENST00000549271 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
DDX54-206ENST00000549271 CYP2C8P10632 490 aa15.39■□□□□ 0.05
DDX54-206ENST00000549271 HIBADHP31937 336 aaKnown RBP15.39■□□□□ 0.05
DDX54-206ENST00000549271 GYG1P46976 350 aa15.39■□□□□ 0.05
DDX54-206ENST00000549271 FAM84BQ96KN1 310 aaPredicted RBP15.39■□□□□ 0.05
DDX54-206ENST00000549271 ZNF112Q9UJU3 913 aa15.39■□□□□ 0.05
DDX54-206ENST00000549271 DDX60LQ5H9U9 1706 aaKnown RBP15.38■□□□□ 0.05
DDX54-206ENST00000549271 PLIN1O60240 522 aa15.38■□□□□ 0.05
DDX54-206ENST00000549271 MAGEA10P43363 369 aaPredicted RBP15.38■□□□□ 0.05
DDX54-206ENST00000549271 UBE4AQ14139 1066 aa15.38■□□□□ 0.05
DDX54-206ENST00000549271 MIGA2Q7L4E1 593 aa15.38■□□□□ 0.05
DDX54-206ENST00000549271 ANKLE1Q8NAG6 615 aa15.38■□□□□ 0.05
DDX54-206ENST00000549271 ZDHHC15Q96MV8 337 aa15.38■□□□□ 0.05
DDX54-206ENST00000549271 PTPRFP10586 1907 aa15.38■□□□□ 0.05
DDX54-206ENST00000549271 AK9Q5TCS8 1911 aa15.37■□□□□ 0.05
DDX54-206ENST00000549271 F6X3S4 739 aa15.37■□□□□ 0.05
DDX54-206ENST00000549271 GRM8O00222 908 aa15.37■□□□□ 0.05
DDX54-206ENST00000549271 NOL9Q5SY16 702 aaKnown RBP15.37■□□□□ 0.05
DDX54-206ENST00000549271 APOBEC3HQ6NTF7 200 aaKnown RBP15.37■□□□□ 0.05
DDX54-206ENST00000549271 LMBR1LQ6UX01 489 aa15.37■□□□□ 0.05
DDX54-206ENST00000549271 LDHAL6AQ6ZMR3 332 aa15.37■□□□□ 0.05
DDX54-206ENST00000549271 TEKT1Q969V4 418 aa15.37■□□□□ 0.05
DDX54-206ENST00000549271 ZNF594Q96JF6 807 aaPredicted RBP15.37■□□□□ 0.05
DDX54-206ENST00000549271 MRIQ9BWK5 157 aa15.37■□□□□ 0.05
DDX54-206ENST00000549271 TMOD2Q9NZR1 351 aa15.37■□□□□ 0.05
DDX54-206ENST00000549271 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
DDX54-206ENST00000549271 SYN1P17600 705 aa15.36■□□□□ 0.05
DDX54-206ENST00000549271 CCDC57Q2TAC2 916 aa15.36■□□□□ 0.05
DDX54-206ENST00000549271 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
DDX54-206ENST00000549271 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.05
DDX54-206ENST00000549271 RPTORQ8N122 1335 aa15.36■□□□□ 0.05
DDX54-206ENST00000549271 COL2A1P02458 1487 aaPredicted RBP15.35■□□□□ 0.05
DDX54-206ENST00000549271 CXCL11O14625 94 aa15.35■□□□□ 0.05
DDX54-206ENST00000549271 TNPO2O14787 897 aaKnown RBP15.35■□□□□ 0.05
DDX54-206ENST00000549271 TBC1D22AQ8WUA7 517 aa15.35■□□□□ 0.05
DDX54-206ENST00000549271 GUCD1Q96NT3 240 aa15.35■□□□□ 0.05
DDX54-206ENST00000549271 PRDM6Q9NQX0 595 aa15.35■□□□□ 0.05
DDX54-206ENST00000549271 CNNM1Q9NRU3 951 aa15.35■□□□□ 0.05
DDX54-206ENST00000549271 CHMP3Q9Y3E7 222 aa15.35■□□□□ 0.05
DDX54-206ENST00000549271 DNAH12Q6ZR08 3092 aa15.35■□□□□ 0.05
DDX54-206ENST00000549271 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
DDX54-206ENST00000549271 FAM109BQ6ICB4 259 aaPredicted RBP15.34■□□□□ 0.05
DDX54-206ENST00000549271 FBXO33Q7Z6M2 555 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms