RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 SF3B2Q13435 895 aaKnown RBP7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 LRRC69Q6ZNQ3 347 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 LARGE2Q8N3Y3 721 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 OGFOD1Q8N543 542 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 RAPGEF4Q8WZA2 1011 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 MARK1Q9P0L2 795 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 STARD13Q9Y3M8 1113 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 GPC6Q9Y625 555 aaPredicted RBP7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 NUP188Q5SRE5 1749 aa7.89□□□□□ -1.15
EFCAB2-215ENST00000549220 OVOS2A0A0G2JMS6 1433 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 GNB5O14775 395 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 U2SURPO15042 1029 aaKnown RBP7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 TRIM37O94972 964 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 C1orf53Q5VUE5 145 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 CD163Q86VB7 1156 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 TRIM50Q86XT4 487 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 ACSBG1Q96GR2 724 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 RRAGCQ9HB90 399 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 RREB1Q92766 1687 aa7.88□□□□□ -1.15
EFCAB2-215ENST00000549220 TAF1LQ8IZX4 1826 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 SERTM1A2A2V5 107 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 C1QTNF9BB2RNN3 333 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 HMOX1P09601 288 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 PPP2R1AP30153 589 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 CHRNA4P43681 627 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 BAG6P46379 1132 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 DEFB132Q7Z7B7 95 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 MARCH10Q8NA82 808 aaPredicted RBP7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 TSEN2Q8NCE0 465 aaKnown RBP7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 ZNF280CQ8ND82 737 aa7.87□□□□□ -1.15
EFCAB2-215ENST00000549220 NPC1L1Q9UHC9 1359 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 SFI1A8K8P3 1242 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 ADARB2-AS1A8MUL3 147 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 RAD21O60216 631 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 DIAPH1O60610 1272 aaKnown RBP7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 KCNQ4P56696 695 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 PSMA6P60900 246 aaKnown RBP7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 FAM196AQ6ZSG2 479 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 AEBP1Q8IUX7 1158 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 SYTL4Q96C24 671 aaPredicted RBP7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 CFAP53Q96M91 514 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 MAFBQ9Y5Q3 323 aaPredicted RBP7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 TUBGCP6Q96RT7 1819 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 RGPD3A6NKT7 1758 aaPredicted RBP7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 RGPD4Q7Z3J3 1758 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 COL3A1P02461 1466 aaPredicted RBP7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 LY75O60449 1722 aa7.86□□□□□ -1.15
EFCAB2-215ENST00000549220 PALM3A6NDB9 673 aaPredicted RBP7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 SIN3BO75182 1162 aa7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 SULT6B1Q6IMI4 303 aa7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 BICDL1Q6ZP65 573 aa7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 SYT9Q86SS6 491 aa7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 STAG2Q8N3U4 1231 aa7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 ZCRB1Q8TBF4 217 aaKnown RBP7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 TNFRSF25Q93038 417 aa7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 HSH2DQ96JZ2 352 aa7.85□□□□□ -1.15
EFCAB2-215ENST00000549220 PARD3Q8TEW0 1356 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 C5P01031 1676 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 ELOA3CA0A087WX78 387 aaPredicted RBP7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 ELOA3DA6NLF2 546 aaPredicted RBP7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 APBA3O96018 575 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 GRNP28799 593 aaKnown RBP7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 IL13P35225 146 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 ATP1A2P50993 1020 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 TYRO3Q06418 890 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 ELOA3BQ3SY89 546 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 PTF1AQ7RTS3 328 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 ELOA3Q8NG57 546 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 GLMNQ92990 594 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 PHACTR1Q9C0D0 580 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 TFIP11Q9UBB9 837 aaKnown RBP7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 HCN4Q9Y3Q4 1203 aa7.84□□□□□ -1.15
EFCAB2-215ENST00000549220 IGSF1Q8N6C5 1336 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 PCDH11XQ9BZA7 1347 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 PCDH11YQ9BZA8 1340 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 KCNQ2O43526 872 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 AMPD1P23109 780 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 C20orf204Q6ZNR8 217 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 WWC1Q8IX03 1113 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 DMGDHQ9UI17 866 aaKnown RBP7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 BCS1LQ9Y276 419 aa7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 SIPA1L3O60292 1781 aaPredicted RBP7.83□□□□□ -1.16
EFCAB2-215ENST00000549220 U2AF1L5P0DN76 240 aaPredicted RBP7.82□□□□□ -1.16
EFCAB2-215ENST00000549220 U2AF1Q01081 240 aaKnown RBP eCLIP7.82□□□□□ -1.16
EFCAB2-215ENST00000549220 PTK7Q13308 1070 aa7.82□□□□□ -1.16
EFCAB2-215ENST00000549220 NCAPD2Q15021 1401 aa7.82□□□□□ -1.16
EFCAB2-215ENST00000549220 EZH2Q15910 746 aaKnown RBP7.82□□□□□ -1.16
EFCAB2-215ENST00000549220 CRTC2Q53ET0 693 aaPredicted RBP7.82□□□□□ -1.16
EFCAB2-215ENST00000549220 ZNF530Q6P9A1 599 aaPredicted RBP7.82□□□□□ -1.16
EFCAB2-215ENST00000549220 SUSD3Q96L08 255 aa7.82□□□□□ -1.16
EFCAB2-215ENST00000549220 MYBBP1AQ9BQG0 1328 aaKnown RBP7.81□□□□□ -1.16
EFCAB2-215ENST00000549220 CYP27B1O15528 508 aa7.81□□□□□ -1.16
EFCAB2-215ENST00000549220 RALBP1Q15311 655 aa7.81□□□□□ -1.16
EFCAB2-215ENST00000549220 PLEKHO1Q53GL0 409 aaPredicted RBP7.81□□□□□ -1.16
EFCAB2-215ENST00000549220 C1orf141Q5JVX7 400 aa7.81□□□□□ -1.16
EFCAB2-215ENST00000549220 RHPN1Q8TCX5 695 aa7.81□□□□□ -1.16
EFCAB2-215ENST00000549220 ZNF594Q96JF6 807 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms