RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 MAP3K6O95382 1288 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 RECKO95980 971 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 PCSK2P16519 638 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 TARSP26639 723 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 CD68P34810 354 aaPredicted RBP3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 ENOX2Q16206 610 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 MLANAQ16655 118 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 SGO2Q562F6 1265 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 USPL1Q5W0Q7 1092 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 TXNDC11Q6PKC3 985 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 CMTR1Q8N1G2 835 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 BCL7CQ8WUZ0 217 aaPredicted RBP3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 DUSP9Q99956 384 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 SRA1Q9HD15 236 aaKnown RBP3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 FAM13BQ9NYF5 915 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 TMEM63CQ9P1W3 806 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 HMGXB3Q12766 1538 aa3.53□□□□□ -1.84
DEPDC4-206ENST00000549100 UBAP1LF5GYI3 381 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 LINC01387J3KSC0 135 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 OVOL3O00110 214 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 EIF1AYO14602 144 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 SUV39H1O43463 412 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 XYLBO75191 536 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 PRPF40AO75400 957 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 TNFRSF21O75509 655 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 RNASE1P07998 156 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 EIF2AK2P19525 551 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 VAMP1P23763 118 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 GPLD1P80108 840 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 MRPL58Q14197 206 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 PCSK7Q16549 785 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 XKR5Q6UX68 686 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 ZNF438Q7Z4V0 828 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 MAP4K3Q8IVH8 894 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 UBASH3BQ8TF42 649 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 PLD4Q96BZ4 506 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 MBNL3Q9NUK0 354 aaKnown RBP3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 PARP2Q9UGN5 583 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 TRIM33Q9UPN9 1127 aa3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.52□□□□□ -1.85
DEPDC4-206ENST00000549100 DHX57Q6P158 1386 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 ADAM11O75078 769 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 EGFRP00533 1210 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 RPLP1P05386 114 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 EPB42P16452 691 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 MAP4P27816 1152 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 LDLRAD1Q5T700 205 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 DIEXFQ68CQ4 756 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 PDE12Q6L8Q7 609 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 PI16Q6UXB8 463 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 SYDE1Q6ZW31 735 aaPredicted RBP3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 SNX29Q8TEQ0 813 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 CHRDQ9H2X0 955 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 ELP3Q9H9T3 547 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 RC3H2Q9HBD1 1191 aaKnown RBP3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 CNTN3Q9P232 1028 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 FGD5Q6ZNL6 1462 aa3.51□□□□□ -1.85
DEPDC4-206ENST00000549100 LRRIQ1Q96JM4 1722 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 CUX2O14529 1486 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 A0A0G2JLL6 359 aaPredicted RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 CPNE3O75131 537 aaKnown RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 SASH3O75995 380 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 POLR3DP05423 398 aaPredicted RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 HOXD8P13378 290 aaPredicted RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 DAB2P98082 770 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 ATP2B2Q01814 1243 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 XPCQ01831 940 aaPredicted RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 BNIP3Q12983 259 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 DUOXA2Q1HG44 320 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 TSNAXIP1Q2TAA8 658 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 ALG1LQ6GMV1 187 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 ADAMTSL4Q6UY14 1074 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 TMC4Q7Z404 712 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 C1orf127Q8N9H9 656 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 TTC16Q8NEE8 873 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 GIMAP7Q8NHV1 300 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 EPS8L3Q8TE67 593 aaKnown RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 CARD10Q9BWT7 1032 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 BACH2Q9BYV9 841 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 DNAJC25Q9H1X3 360 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 ZFYVE28Q9HCC9 887 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 ABI2Q9NYB9 513 aaPredicted RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 FNDC3AQ9Y2H6 1198 aaKnown RBP3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 PRDM2Q13029 1718 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 CADPSQ9ULU8 1353 aa3.5□□□□□ -1.85
DEPDC4-206ENST00000549100 ERICH3Q5RHP9 1530 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 FAM170BA6NMN3 283 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 EREGO14944 169 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 SART1O43290 800 aaKnown RBP3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 PHACTR2O75167 634 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 CYP2E1P05181 493 aaPredicted RBP3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 TCF3P15923 654 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 GNA15P30679 374 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 ITGAEP38570 1179 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 PSMD2Q13200 908 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 NLRP13Q86W25 1043 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 LRRN4CLQ8ND94 238 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 FBF1Q8TES7 1133 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms