RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.67□□□□□ -0.7
SP1-203ENST00000548560 SALL1Q9NSC2 1324 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 DOCK2Q92608 1830 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 TMEM88BA6NKF7 163 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 LDHBP07195 334 aaKnown RBP10.66□□□□□ -0.7
SP1-203ENST00000548560 IFIT2P09913 472 aaKnown RBP10.66□□□□□ -0.7
SP1-203ENST00000548560 ARID4AP29374 1257 aaPredicted RBP10.66□□□□□ -0.7
SP1-203ENST00000548560 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
SP1-203ENST00000548560 NBPF9Q3BBW0 867 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 SPTY2D1Q68D10 685 aaPredicted RBP10.66□□□□□ -0.7
SP1-203ENST00000548560 USP48Q86UV5 1035 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 DZIP1Q86YF9 867 aaKnown RBP10.66□□□□□ -0.7
SP1-203ENST00000548560 MTMR14Q8NCE2 650 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 DBNDD2Q9BQY9 259 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 CCDC8Q9H0W5 538 aaPredicted RBP10.66□□□□□ -0.7
SP1-203ENST00000548560 ZNF408Q9H9D4 720 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 IL1RAPL2Q9NP60 686 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 ABCF2Q9UG63 623 aa10.66□□□□□ -0.7
SP1-203ENST00000548560 ASTN2O75129 1339 aaPredicted RBP10.65□□□□□ -0.7
SP1-203ENST00000548560 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
SP1-203ENST00000548560 ADM5C9JUS6 153 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 TRAF5O00463 557 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 CELF2O95319 508 aaKnown RBP10.65□□□□□ -0.7
SP1-203ENST00000548560 CRKP46108 304 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 HDLBPQ00341 1268 aaKnown RBP10.65□□□□□ -0.7
SP1-203ENST00000548560 SPATA5Q8NB90 893 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 EAF2Q96CJ1 260 aaPredicted RBP10.65□□□□□ -0.7
SP1-203ENST00000548560 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
SP1-203ENST00000548560 PHF12Q96QT6 1004 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 TMEM106CQ9BVX2 250 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 LRRCC1Q9C099 1032 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 VEZTQ9HBM0 779 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 TMOD2Q9NZR1 351 aa10.65□□□□□ -0.7
SP1-203ENST00000548560 DBNLQ9UJU6 430 aaKnown RBP10.65□□□□□ -0.7
SP1-203ENST00000548560 ABT1Q9ULW3 272 aaKnown RBP10.65□□□□□ -0.7
SP1-203ENST00000548560 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.71
SP1-203ENST00000548560 CLRN2A0PK11 232 aa10.64□□□□□ -0.71
SP1-203ENST00000548560 PRDX5P30044 214 aa10.64□□□□□ -0.71
SP1-203ENST00000548560 NF2P35240 595 aa10.64□□□□□ -0.71
SP1-203ENST00000548560 MCAMP43121 646 aa10.64□□□□□ -0.71
SP1-203ENST00000548560 TNFAIP1Q13829 316 aa10.64□□□□□ -0.71
SP1-203ENST00000548560 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
SP1-203ENST00000548560 TLR7Q9NYK1 1049 aaKnown RBP10.64□□□□□ -0.71
SP1-203ENST00000548560 HMG20BQ9P0W2 317 aa10.64□□□□□ -0.71
SP1-203ENST00000548560 THSD7BQ9C0I4 1608 aa10.63□□□□□ -0.71
SP1-203ENST00000548560 GRIK5Q16478 980 aa10.63□□□□□ -0.71
SP1-203ENST00000548560 HHIPL2Q6UWX4 724 aa10.63□□□□□ -0.71
SP1-203ENST00000548560 CDCA5Q96FF9 252 aa10.63□□□□□ -0.71
SP1-203ENST00000548560 ZBED3Q96IU2 234 aaPredicted RBP10.63□□□□□ -0.71
SP1-203ENST00000548560 ZNF512BQ96KM6 892 aaPredicted RBP10.63□□□□□ -0.71
SP1-203ENST00000548560 PRMT6Q96LA8 375 aaPredicted RBP10.63□□□□□ -0.71
SP1-203ENST00000548560 ZDHHC15Q96MV8 337 aa10.63□□□□□ -0.71
SP1-203ENST00000548560 RAI14Q9P0K7 980 aa10.63□□□□□ -0.71
SP1-203ENST00000548560 PCDHB15Q9Y5E8 787 aa10.63□□□□□ -0.71
SP1-203ENST00000548560 CDK5RAP2Q96SN8 1893 aa10.63□□□□□ -0.71
SP1-203ENST00000548560 TNNI2P48788 182 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 GSTO1P78417 241 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 FMR1Q06787 632 aaKnown RBP eCLIP10.62□□□□□ -0.71
SP1-203ENST00000548560 PI16Q6UXB8 463 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 EXOC6Q8TAG9 804 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 MRIQ9BWK5 157 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 DCTPP1Q9H773 170 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 TDRD3Q9H7E2 651 aaKnown RBP10.62□□□□□ -0.71
SP1-203ENST00000548560 SNRKQ9NRH2 765 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 LRP2BPQ9P2M1 347 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 SCAF8Q9UPN6 1271 aaKnown RBP10.62□□□□□ -0.71
SP1-203ENST00000548560 PCDHAC2Q9Y5I4 1007 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 PPP2R3BQ9Y5P8 575 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 FOCADQ5VW36 1801 aa10.62□□□□□ -0.71
SP1-203ENST00000548560 LDHCP07864 332 aa10.61□□□□□ -0.71
SP1-203ENST00000548560 DIXDC1Q155Q3 683 aa10.61□□□□□ -0.71
SP1-203ENST00000548560 C2orf69Q8N8R5 385 aa10.61□□□□□ -0.71
SP1-203ENST00000548560 NOL10Q9BSC4 688 aaKnown RBP10.61□□□□□ -0.71
SP1-203ENST00000548560 GBA2Q9HCG7 927 aaPredicted RBP10.61□□□□□ -0.71
SP1-203ENST00000548560 ZNF70Q9UC06 446 aaPredicted RBP10.61□□□□□ -0.71
SP1-203ENST00000548560 DAGLAQ9Y4D2 1042 aa10.61□□□□□ -0.71
SP1-203ENST00000548560 OTOFQ9HC10 1997 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 TCP10L2B9ZVM9 353 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 SMARCA5O60264 1052 aaPredicted RBP10.6□□□□□ -0.71
SP1-203ENST00000548560 IGSF3O75054 1194 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 ZAP70P43403 619 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 IRX6P78412 446 aaPredicted RBP10.6□□□□□ -0.71
SP1-203ENST00000548560 MECOMQ03112 1051 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 HDAC1Q13547 482 aaPredicted RBP10.6□□□□□ -0.71
SP1-203ENST00000548560 TTLL12Q14166 644 aaPredicted RBP10.6□□□□□ -0.71
SP1-203ENST00000548560 MFSD10Q14728 455 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 CST9Q5W186 159 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 TBC1D9Q6ZT07 1266 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 GCC1Q96CN9 775 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 DEFB129Q9H1M3 183 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 RWDD1Q9H446 243 aaPredicted RBP10.6□□□□□ -0.71
SP1-203ENST00000548560 MKRN1Q9UHC7 482 aaKnown RBP10.6□□□□□ -0.71
SP1-203ENST00000548560 TLL2Q9Y6L7 1015 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 CNTNAP1P78357 1384 aa10.6□□□□□ -0.71
SP1-203ENST00000548560 MROH7-TTC4A0A0A0MT08 1334 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 MYH1P12882 1939 aa10.59□□□□□ -0.71
SP1-203ENST00000548560 IDH1O75874 414 aaKnown RBP10.59□□□□□ -0.71
SP1-203ENST00000548560 CYP2E1P05181 493 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms