RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 LAMA4Q16363 1823 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 IQCA1LA6NCM1 817 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 PATL2C9JE40 543 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 F8W031 263 aaPredicted RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 NPM3O75607 178 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 APPP05067 770 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 SLC3A2P08195 630 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 PCP11498 1178 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 BTDP43251 543 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 ZNF280AP59817 542 aaPredicted RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 TNFAIP1Q13829 316 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 KRT32Q14532 448 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 DLGAP5Q15398 846 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 ALX1Q15699 326 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 IMMTQ16891 758 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 FKBP1CQ5VVH2 108 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 MAP4K1Q92918 833 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 STRBPQ96SI9 672 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 RIOK1Q9BRS2 568 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 PUS7LQ9H0K6 701 aaKnown RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 ZNF287Q9HBT7 754 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 AATFQ9NY61 560 aaKnown RBP eCLIP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 DAGLAQ9Y4D2 1042 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 GJA3Q9Y6H8 435 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 SLC4A4Q9Y6R1 1079 aa8.53□□□□□ -1.04
CALCOCO1-211ENST00000548431 NAV1Q8NEY1 1877 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 SPDYE2BA6NHP3 402 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 M0R2C6 588 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 SPDYE6P0CI01 402 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 HSPD1P10809 573 aaKnown RBP8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 USP5P45974 858 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 TDO2P48775 406 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 RBM25P49756 843 aaKnown RBP8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 GMPSP49915 693 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 CFAP100Q494V2 611 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 ZNF589Q86UQ0 364 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 TEX11Q8IYF3 940 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 MIGA1Q8NAN2 632 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 L3MBTL3Q96JM7 780 aaPredicted RBP8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 USP26Q9BXU7 913 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 C22orf23Q9BZE7 217 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 LSG1Q9H089 658 aaKnown RBP8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 NAPBQ9H115 298 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 MYOZ2Q9NPC6 264 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 KCNQ5Q9NR82 932 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 ZNF541Q9H0D2 1346 aa8.52□□□□□ -1.05
CALCOCO1-211ENST00000548431 COL2A1P02458 1487 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 CDK5RAP2Q96SN8 1893 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 LAMB1P07942 1786 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 GLTPD2A6NH11 291 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 ZNF213O14771 459 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 HMGB1P09429 215 aaKnown RBP8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 HSPA4P34932 840 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 TNNI2P48788 182 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 SCNN1DP51172 638 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 ADGRA1Q86SQ6 560 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 MICALL2Q8IY33 904 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 LCORLQ8N3X6 602 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 ZNF384Q8TF68 577 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 HOOK2Q96ED9 719 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 SEC62Q99442 399 aaKnown RBP8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 IDI2Q9BXS1 227 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 DHX36Q9H2U1 1008 aaKnown RBP8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 RNF41Q9H4P4 317 aaPredicted RBP8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 CNNM2Q9H8M5 875 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 ARMT1Q9H993 441 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 USP40Q9NVE5 1235 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 GPRC5DQ9NZD1 345 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 CNOT7Q9UIV1 285 aaKnown RBP8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 WDR90Q96KV7 1748 aa8.51□□□□□ -1.05
CALCOCO1-211ENST00000548431 ENTPD3O75355 529 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 PSMA5P28066 241 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 PRELPP51888 382 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 TRDNQ13061 729 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 TSGA10IPQ3SY00 556 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 SBK1Q52WX2 424 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 APOBEC3HQ6NTF7 200 aaKnown RBP8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 CCDC129Q6ZRS4 1044 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 TTC6Q86TZ1 520 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 PNMA8AQ86V59 439 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 APOBEC3FQ8IUX4 373 aaKnown RBP8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 IFNL3Q8IZI9 196 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 SH3RF3Q8TEJ3 882 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 TBC1D32Q96NH3 1257 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 MXD3Q9BW11 206 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 ADARB2Q9NS39 739 aaKnown RBP8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 ZBTB12Q9Y330 459 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 RBM8AQ9Y5S9 174 aaKnown RBP8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 MYH1P12882 1939 aa8.5□□□□□ -1.05
CALCOCO1-211ENST00000548431 GSG1L2A8MUP6 293 aa8.49□□□□□ -1.05
CALCOCO1-211ENST00000548431 FGAP02671 866 aa8.49□□□□□ -1.05
CALCOCO1-211ENST00000548431 HLA-DOAP06340 250 aa8.49□□□□□ -1.05
CALCOCO1-211ENST00000548431 RHBDL3P58872 404 aa8.49□□□□□ -1.05
CALCOCO1-211ENST00000548431 PDE4BQ07343 736 aa8.49□□□□□ -1.05
CALCOCO1-211ENST00000548431 NECTIN1Q15223 517 aa8.49□□□□□ -1.05
CALCOCO1-211ENST00000548431 GRIK5Q16478 980 aa8.49□□□□□ -1.05
CALCOCO1-211ENST00000548431 KIF4BQ2VIQ3 1234 aa8.49□□□□□ -1.05
CALCOCO1-211ENST00000548431 SPDYE2Q495Y8 402 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms