RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ZC3H7BQ9UGR2 993 aaKnown RBP7.28□□□□□ -1.24
SCAF11-210ENST00000547654 SOWAHDA6NJG2 315 aa7.27□□□□□ -1.25
SCAF11-210ENST00000547654 H3BRB1 525 aa7.27□□□□□ -1.25
SCAF11-210ENST00000547654 ASPAP45381 313 aa7.27□□□□□ -1.25
SCAF11-210ENST00000547654 ZNF423Q2M1K9 1284 aa7.27□□□□□ -1.25
SCAF11-210ENST00000547654 TUT1Q9H6E5 874 aaKnown RBP7.27□□□□□ -1.25
SCAF11-210ENST00000547654 ACSS3Q9H6R3 686 aa7.27□□□□□ -1.25
SCAF11-210ENST00000547654 SLC5A6Q9Y289 635 aa7.27□□□□□ -1.25
SCAF11-210ENST00000547654 DAGLAQ9Y4D2 1042 aa7.27□□□□□ -1.25
SCAF11-210ENST00000547654 A0A1W2PP55 124 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 GPR182O15218 404 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 BRD1O95696 1058 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 C8AP07357 584 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 CTSBP07858 339 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 GRIA4P48058 902 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 PDE3AQ14432 1141 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 PLCL1Q15111 1095 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 SPRED3Q2MJR0 410 aa7.26□□□□□ -1.25
SCAF11-210ENST00000547654 COL19A1Q14993 1142 aa7.25□□□□□ -1.25
SCAF11-210ENST00000547654 USPL1Q5W0Q7 1092 aa7.25□□□□□ -1.25
SCAF11-210ENST00000547654 STK11IPQ8N1F8 1099 aa7.25□□□□□ -1.25
SCAF11-210ENST00000547654 B3GALT4O96024 378 aa7.24□□□□□ -1.25
SCAF11-210ENST00000547654 GALNT12Q8IXK2 581 aa7.24□□□□□ -1.25
SCAF11-210ENST00000547654 TCF12Q99081 682 aa7.24□□□□□ -1.25
SCAF11-210ENST00000547654 TRIM56Q9BRZ2 755 aaKnown RBP7.24□□□□□ -1.25
SCAF11-210ENST00000547654 RBCK1Q9BYM8 510 aa7.24□□□□□ -1.25
SCAF11-210ENST00000547654 BIN1O00499 593 aa7.23□□□□□ -1.25
SCAF11-210ENST00000547654 ECEL1O95672 775 aa7.23□□□□□ -1.25
SCAF11-210ENST00000547654 BCL7CQ8WUZ0 217 aaPredicted RBP7.23□□□□□ -1.25
SCAF11-210ENST00000547654 ALKBH8Q96BT7 664 aaKnown RBP7.23□□□□□ -1.25
SCAF11-210ENST00000547654 CITED4Q96RK1 184 aa7.23□□□□□ -1.25
SCAF11-210ENST00000547654 LGR6Q9HBX8 967 aa7.23□□□□□ -1.25
SCAF11-210ENST00000547654 AOC2O75106 756 aa7.22□□□□□ -1.25
SCAF11-210ENST00000547654 PAPLNO95428 1278 aa7.22□□□□□ -1.25
SCAF11-210ENST00000547654 DSC3Q14574 896 aa7.22□□□□□ -1.25
SCAF11-210ENST00000547654 CYP27C1Q4G0S4 372 aa7.22□□□□□ -1.25
SCAF11-210ENST00000547654 ZNF574Q6ZN55 896 aaPredicted RBP7.22□□□□□ -1.25
SCAF11-210ENST00000547654 GLYCTKQ8IVS8 523 aa7.22□□□□□ -1.25
SCAF11-210ENST00000547654 EHD4Q9H223 541 aa7.22□□□□□ -1.25
SCAF11-210ENST00000547654 ZNF576Q9H609 170 aa7.22□□□□□ -1.25
SCAF11-210ENST00000547654 C1GALT1Q9NS00 363 aa7.22□□□□□ -1.25
SCAF11-210ENST00000547654 DYNC1LI2O43237 492 aaPredicted RBP7.21□□□□□ -1.26
SCAF11-210ENST00000547654 NEFLP07196 543 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 PDE4CQ08493 712 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 AP3B2Q13367 1082 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 ORC1Q13415 861 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 ZNF792Q3KQV3 632 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 OGFOD3Q6PK18 319 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 MISP3Q96FF7 219 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 WDR18Q9BV38 432 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 TRAIPQ9BWF2 469 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 GSX1Q9H4S2 264 aaPredicted RBP7.21□□□□□ -1.26
SCAF11-210ENST00000547654 PIDD1Q9HB75 910 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 BRPF3Q9ULD4 1205 aa7.21□□□□□ -1.26
SCAF11-210ENST00000547654 HNRNPUQ00839 825 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCAF11-210ENST00000547654 KIAA0319Q5VV43 1072 aa7.2□□□□□ -1.26
SCAF11-210ENST00000547654 SEZ6L2Q6UXD5 910 aa7.2□□□□□ -1.26
SCAF11-210ENST00000547654 GLIS3Q8NEA6 775 aa7.2□□□□□ -1.26
SCAF11-210ENST00000547654 CDK5R2Q13319 367 aa7.19□□□□□ -1.26
SCAF11-210ENST00000547654 CCER1Q8TC90 406 aaPredicted RBP7.19□□□□□ -1.26
SCAF11-210ENST00000547654 FAM87AP0C7U9 286 aa7.18□□□□□ -1.26
SCAF11-210ENST00000547654 ITPKAP23677 461 aa7.18□□□□□ -1.26
SCAF11-210ENST00000547654 ZNF648Q5T619 568 aaPredicted RBP7.18□□□□□ -1.26
SCAF11-210ENST00000547654 TMC7Q7Z402 723 aa7.18□□□□□ -1.26
SCAF11-210ENST00000547654 SPRED2Q7Z698 418 aa7.18□□□□□ -1.26
SCAF11-210ENST00000547654 ATXN3LQ9H3M9 355 aa7.18□□□□□ -1.26
SCAF11-210ENST00000547654 NPHS2Q9NP85 383 aa7.18□□□□□ -1.26
SCAF11-210ENST00000547654 PPP1R9AQ9ULJ8 1098 aa7.18□□□□□ -1.26
SCAF11-210ENST00000547654 ARHGAP27Q6ZUM4 889 aa7.17□□□□□ -1.26
SCAF11-210ENST00000547654 PLD6Q8N2A8 252 aaKnown RBP7.17□□□□□ -1.26
SCAF11-210ENST00000547654 FAM181AQ8N9Y4 354 aa7.17□□□□□ -1.26
SCAF11-210ENST00000547654 NETO1Q8TDF5 533 aa7.17□□□□□ -1.26
SCAF11-210ENST00000547654 RC3H2Q9HBD1 1191 aaKnown RBP7.17□□□□□ -1.26
SCAF11-210ENST00000547654 SYNGAP1Q96PV0 1343 aa7.17□□□□□ -1.26
SCAF11-210ENST00000547654 EIF1AYO14602 144 aaKnown RBP7.16□□□□□ -1.26
SCAF11-210ENST00000547654 TMPRSS2O15393 492 aa7.16□□□□□ -1.26
SCAF11-210ENST00000547654 NDUFB5O43674 189 aa7.16□□□□□ -1.26
SCAF11-210ENST00000547654 CPNE3O75131 537 aaKnown RBP7.16□□□□□ -1.26
SCAF11-210ENST00000547654 BNIP3Q12983 259 aa7.16□□□□□ -1.26
SCAF11-210ENST00000547654 PKN1Q16512 942 aa7.16□□□□□ -1.26
SCAF11-210ENST00000547654 WFDC3Q8IUB2 231 aa7.16□□□□□ -1.26
SCAF11-210ENST00000547654 TREHO43280 583 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 SLFN14P0C7P3 912 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 LIG1P18858 919 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 FUT4P22083 530 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 ID3Q02535 119 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 PTPN12Q05209 780 aaKnown RBP7.15□□□□□ -1.26
SCAF11-210ENST00000547654 PDE3BQ13370 1112 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 ATG4DQ86TL0 474 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-210ENST00000547654 FAM168AQ92567 244 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 ZC3H12CQ9C0D7 883 aaKnown RBP7.15□□□□□ -1.26
SCAF11-210ENST00000547654 NIF3L1Q9GZT8 377 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 DNAJC25Q9H1X3 360 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 ABCB6Q9NP58 842 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 CRIM1Q9NZV1 1036 aa7.15□□□□□ -1.26
SCAF11-210ENST00000547654 GADD45BO75293 160 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-210ENST00000547654 KCNA1Q09470 495 aa7.14□□□□□ -1.27
SCAF11-210ENST00000547654 ZNF124Q15973 351 aa7.14□□□□□ -1.27
SCAF11-210ENST00000547654 RPS26P11Q5JNZ5 115 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-210ENST00000547654 PRPF40BQ6NWY9 871 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms