RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 ZSWIM5Q9P217 1185 aa21.82■■□□□ 1.08
VDR-204ENST00000547065 HIBADHP31937 336 aaKnown RBP21.81■■□□□ 1.08
VDR-204ENST00000547065 METAP2P50579 478 aaKnown RBP eCLIP21.81■■□□□ 1.08
VDR-204ENST00000547065 CPLX2Q6PUV4 134 aaKnown RBP21.81■■□□□ 1.08
VDR-204ENST00000547065 CCDC24Q8N4L8 307 aa21.81■■□□□ 1.08
VDR-204ENST00000547065 RNF214Q8ND24 703 aa21.81■■□□□ 1.08
VDR-204ENST00000547065 PDLIM2Q96JY6 352 aa21.81■■□□□ 1.08
VDR-204ENST00000547065 LY9Q9HBG7 655 aa21.81■■□□□ 1.08
VDR-204ENST00000547065 LIG1P18858 919 aa21.8■■□□□ 1.08
VDR-204ENST00000547065 APOA5Q6Q788 366 aa21.8■■□□□ 1.08
VDR-204ENST00000547065 NFXL1Q6ZNB6 911 aa21.8■■□□□ 1.08
VDR-204ENST00000547065 PGBD1Q96JS3 809 aa21.8■■□□□ 1.08
VDR-204ENST00000547065 INCENPQ9NQS7 918 aa21.8■■□□□ 1.08
VDR-204ENST00000547065 C4BP0C0L5 1744 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 IFIT3O14879 490 aaKnown RBP21.79■■□□□ 1.08
VDR-204ENST00000547065 ZBTB43O43298 467 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 KDM4AO75164 1064 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 GUCY1B3Q02153 619 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 NFIXQ14938 502 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 GIMAP6Q6P9H5 292 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 TMED8Q6PL24 325 aaPredicted RBP21.79■■□□□ 1.08
VDR-204ENST00000547065 ADGRA1Q86SQ6 560 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 FBXO18Q8NFZ0 1043 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 QTRT2Q9H974 415 aaKnown RBP21.79■■□□□ 1.08
VDR-204ENST00000547065 LRRC4BQ9NT99 713 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 DDX19AQ9NUU7 478 aaKnown RBP21.79■■□□□ 1.08
VDR-204ENST00000547065 COL1A1P02452 1464 aaPredicted RBP21.79■■□□□ 1.08
VDR-204ENST00000547065 PPFIA3O75145 1194 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 RAB11FIP4Q86YS3 637 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 RIOK1Q9BRS2 568 aaKnown RBP21.79■■□□□ 1.08
VDR-204ENST00000547065 FUCA2Q9BTY2 467 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 NUP62CLQ9H1M0 184 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 ANAPC4Q9UJX5 808 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 TACC3Q9Y6A5 838 aa21.79■■□□□ 1.08
VDR-204ENST00000547065 TAF1LQ8IZX4 1826 aa21.78■■□□□ 1.08
VDR-204ENST00000547065 A0A1B0GUL6 1792 aa21.78■■□□□ 1.08
VDR-204ENST00000547065 RRAGDQ9NQL2 400 aaPredicted RBP21.78■■□□□ 1.08
VDR-204ENST00000547065 TAF1P21675 1872 aa21.78■■□□□ 1.08
VDR-204ENST00000547065 SBF2Q86WG5 1849 aa21.77■■□□□ 1.08
VDR-204ENST00000547065 PPARAQ07869 468 aa21.77■■□□□ 1.08
VDR-204ENST00000547065 SART3Q15020 963 aaKnown RBP21.77■■□□□ 1.08
VDR-204ENST00000547065 HS1BP3Q53T59 392 aa21.77■■□□□ 1.08
VDR-204ENST00000547065 SLC27A3Q5K4L6 730 aa21.77■■□□□ 1.08
VDR-204ENST00000547065 SYNE3Q6ZMZ3 975 aa21.77■■□□□ 1.08
VDR-204ENST00000547065 TMTC2Q8N394 836 aa21.77■■□□□ 1.08
VDR-204ENST00000547065 CNBD1Q8NA66 436 aa21.77■■□□□ 1.08
VDR-204ENST00000547065 CCDC69A6NI79 296 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 KLRK1P26718 216 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 GRAPQ13588 217 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 MAP3K11Q16584 847 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 ILDR1Q86SU0 546 aaPredicted RBP21.76■■□□□ 1.07
VDR-204ENST00000547065 GRAPLQ8TC17 118 aaPredicted RBP21.76■■□□□ 1.07
VDR-204ENST00000547065 BICD2Q8TD16 824 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 BRIP1Q9BX63 1249 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 SENP2Q9HC62 589 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 DACT1Q9NYF0 836 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 TFCP2L1Q9NZI6 479 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 SLC12A7Q9Y666 1083 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 TIAM2Q8IVF5 1701 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 CASZ1Q86V15 1759 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 ESPNB1AK53 854 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 CCDC192P0DO97 292 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 BRAPQ7Z569 592 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 USP28Q96RU2 1077 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 LEMD3Q9Y2U8 911 aa21.76■■□□□ 1.07
VDR-204ENST00000547065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.75■■□□□ 1.07
VDR-204ENST00000547065 GOLGA8AA7E2F4 631 aa21.75■■□□□ 1.07
VDR-204ENST00000547065 IGSF3O75054 1194 aa21.75■■□□□ 1.07
VDR-204ENST00000547065 CEBPZQ03701 1054 aaKnown RBP21.75■■□□□ 1.07
VDR-204ENST00000547065 RRP12Q5JTH9 1297 aaKnown RBP21.75■■□□□ 1.07
VDR-204ENST00000547065 NSUN4Q96CB9 384 aaKnown RBP21.75■■□□□ 1.07
VDR-204ENST00000547065 CLSTN2Q9H4D0 955 aa21.75■■□□□ 1.07
VDR-204ENST00000547065 TOMM22Q9NS69 142 aa21.75■■□□□ 1.07
VDR-204ENST00000547065 RTEL1Q9NZ71 1219 aa21.75■■□□□ 1.07
VDR-204ENST00000547065 ERICH2A1L162 156 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 CDC27P30260 824 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 OTUD7BQ6GQQ9 843 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 MICU3Q86XE3 530 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 SDR42E1Q8WUS8 393 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 TNMDQ9H2S6 317 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 MINDY4BA8MYZ0 360 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 HMGB2P26583 209 aaKnown RBP21.74■■□□□ 1.07
VDR-204ENST00000547065 DYNLL1P63167 89 aaKnown RBP21.74■■□□□ 1.07
VDR-204ENST00000547065 WTAPQ15007 396 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 SPTY2D1Q68D10 685 aaPredicted RBP21.74■■□□□ 1.07
VDR-204ENST00000547065 ZNF384Q8TF68 577 aa21.74■■□□□ 1.07
VDR-204ENST00000547065 FAM217BQ9NTX9 383 aaPredicted RBP21.74■■□□□ 1.07
VDR-204ENST00000547065 IRS2Q9Y4H2 1338 aa21.73■■□□□ 1.07
VDR-204ENST00000547065 IARSP41252 1262 aaKnown RBP21.73■■□□□ 1.07
VDR-204ENST00000547065 MECOMQ03112 1051 aa21.73■■□□□ 1.07
VDR-204ENST00000547065 NTRK3Q16288 839 aa21.73■■□□□ 1.07
VDR-204ENST00000547065 ALG1Q9BT22 464 aa21.73■■□□□ 1.07
VDR-204ENST00000547065 NID2Q14112 1375 aa21.73■■□□□ 1.07
VDR-204ENST00000547065 NR1I2O75469 434 aa21.72■■□□□ 1.07
VDR-204ENST00000547065 PCP11498 1178 aaKnown RBP21.72■■□□□ 1.07
VDR-204ENST00000547065 RCAN1P53805 252 aa21.72■■□□□ 1.07
VDR-204ENST00000547065 RBM43Q6ZSC3 357 aaKnown RBP21.72■■□□□ 1.07
VDR-204ENST00000547065 ESR2Q92731 530 aa21.72■■□□□ 1.07
VDR-204ENST00000547065 ANKIB1Q9P2G1 1089 aa21.72■■□□□ 1.07
VDR-204ENST00000547065 C4AP0C0L4 1744 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms