RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 NEFLP07196 543 aa8.56□□□□□ -1.04
CCDC38-204ENST00000546816 JAG1P78504 1218 aa8.56□□□□□ -1.04
CCDC38-204ENST00000546816 LCE1DQ5T752 114 aa8.56□□□□□ -1.04
CCDC38-204ENST00000546816 EHD4Q9H223 541 aa8.56□□□□□ -1.04
CCDC38-204ENST00000546816 DAGLAQ9Y4D2 1042 aa8.56□□□□□ -1.04
CCDC38-204ENST00000546816 AP3B2Q13367 1082 aa8.55□□□□□ -1.04
CCDC38-204ENST00000546816 FAM129BQ96TA1 746 aa8.55□□□□□ -1.04
CCDC38-204ENST00000546816 ABCB6Q9NP58 842 aa8.55□□□□□ -1.04
CCDC38-204ENST00000546816 NPHS2Q9NP85 383 aa8.55□□□□□ -1.04
CCDC38-204ENST00000546816 TMPRSS2O15393 492 aa8.54□□□□□ -1.04
CCDC38-204ENST00000546816 CPNE3O75131 537 aaKnown RBP8.54□□□□□ -1.04
CCDC38-204ENST00000546816 PAPLNO95428 1278 aa8.54□□□□□ -1.04
CCDC38-204ENST00000546816 C8AP07357 584 aa8.54□□□□□ -1.04
CCDC38-204ENST00000546816 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
CCDC38-204ENST00000546816 ORC1Q13415 861 aa8.54□□□□□ -1.04
CCDC38-204ENST00000546816 PDE3AQ14432 1141 aa8.54□□□□□ -1.04
CCDC38-204ENST00000546816 ZNF574Q6ZN55 896 aaPredicted RBP8.54□□□□□ -1.04
CCDC38-204ENST00000546816 SPRED2Q7Z698 418 aa8.54□□□□□ -1.04
CCDC38-204ENST00000546816 SLC5A6Q9Y289 635 aa8.54□□□□□ -1.04
CCDC38-204ENST00000546816 H3BRB1 525 aa8.53□□□□□ -1.04
CCDC38-204ENST00000546816 RPS26P11Q5JNZ5 115 aaPredicted RBP8.53□□□□□ -1.04
CCDC38-204ENST00000546816 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
CCDC38-204ENST00000546816 TUT1Q9H6E5 874 aaKnown RBP8.53□□□□□ -1.04
CCDC38-204ENST00000546816 LGR6Q9HBX8 967 aa8.53□□□□□ -1.04
CCDC38-204ENST00000546816 CRIM1Q9NZV1 1036 aa8.53□□□□□ -1.04
CCDC38-204ENST00000546816 IGHA2P01877 340 aa8.52□□□□□ -1.05
CCDC38-204ENST00000546816 SERPINB4P48594 390 aa8.52□□□□□ -1.05
CCDC38-204ENST00000546816 STK11IPQ8N1F8 1099 aa8.52□□□□□ -1.05
CCDC38-204ENST00000546816 WDR89Q96FK6 387 aaPredicted RBP8.52□□□□□ -1.05
CCDC38-204ENST00000546816 CCDC86Q9H6F5 360 aaKnown RBP8.52□□□□□ -1.05
CCDC38-204ENST00000546816 NDUFB5O43674 189 aa8.51□□□□□ -1.05
CCDC38-204ENST00000546816 LIG1P18858 919 aa8.51□□□□□ -1.05
CCDC38-204ENST00000546816 FAAP100Q0VG06 881 aa8.51□□□□□ -1.05
CCDC38-204ENST00000546816 PDE3BQ13370 1112 aa8.51□□□□□ -1.05
CCDC38-204ENST00000546816 CYP27C1Q4G0S4 372 aa8.51□□□□□ -1.05
CCDC38-204ENST00000546816 GLYCTKQ8IVS8 523 aa8.51□□□□□ -1.05
CCDC38-204ENST00000546816 TMEM238LA0A1B0GVL6 79 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 ZNF862O60290 1169 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 ZNF792Q3KQV3 632 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 GLIS3Q8NEA6 775 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 CCDC74AQ96AQ1 378 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 MISP3Q96FF7 219 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 KRTAP4-7Q9BYR0 210 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 USTQ9Y2C2 406 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 PCDHGC5Q9Y5F6 944 aa8.5□□□□□ -1.05
CCDC38-204ENST00000546816 BNIP3Q12983 259 aa8.49□□□□□ -1.05
CCDC38-204ENST00000546816 CDK5R2Q13319 367 aa8.49□□□□□ -1.05
CCDC38-204ENST00000546816 PLCL1Q15111 1095 aa8.49□□□□□ -1.05
CCDC38-204ENST00000546816 FANCD2OSQ96PS1 177 aa8.49□□□□□ -1.05
CCDC38-204ENST00000546816 CITED4Q96RK1 184 aa8.49□□□□□ -1.05
CCDC38-204ENST00000546816 DNAJC25Q9H1X3 360 aa8.49□□□□□ -1.05
CCDC38-204ENST00000546816 CARMIL2Q6F5E8 1435 aa8.48□□□□□ -1.05
CCDC38-204ENST00000546816 EIF1AYO14602 144 aaKnown RBP8.48□□□□□ -1.05
CCDC38-204ENST00000546816 FAM87AP0C7U9 286 aa8.48□□□□□ -1.05
CCDC38-204ENST00000546816 ID3Q02535 119 aa8.48□□□□□ -1.05
CCDC38-204ENST00000546816 KIF4BQ2VIQ3 1234 aa8.48□□□□□ -1.05
CCDC38-204ENST00000546816 B4GALNT3Q6L9W6 998 aa8.48□□□□□ -1.05
CCDC38-204ENST00000546816 PLD6Q8N2A8 252 aaKnown RBP8.48□□□□□ -1.05
CCDC38-204ENST00000546816 ATXN3LQ9H3M9 355 aa8.48□□□□□ -1.05
CCDC38-204ENST00000546816 DISC1Q9NRI5 854 aa8.48□□□□□ -1.05
CCDC38-204ENST00000546816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
CCDC38-204ENST00000546816 U3KQE9 123 aa8.48□□□□□ -1.05
CCDC38-204ENST00000546816 GPR182O15218 404 aa8.47□□□□□ -1.05
CCDC38-204ENST00000546816 SLFN14P0C7P3 912 aa8.47□□□□□ -1.05
CCDC38-204ENST00000546816 ZNF157P51786 506 aaPredicted RBP8.47□□□□□ -1.05
CCDC38-204ENST00000546816 NETO1Q8TDF5 533 aa8.47□□□□□ -1.05
CCDC38-204ENST00000546816 ZC3H12CQ9C0D7 883 aaKnown RBP8.47□□□□□ -1.05
CCDC38-204ENST00000546816 KRT82Q9NSB4 513 aa8.47□□□□□ -1.05
CCDC38-204ENST00000546816 GSTP1P09211 210 aaKnown RBP8.46□□□□□ -1.06
CCDC38-204ENST00000546816 FUT4P22083 530 aa8.46□□□□□ -1.06
CCDC38-204ENST00000546816 GRM2Q14416 872 aa8.46□□□□□ -1.06
CCDC38-204ENST00000546816 SMYD4Q8IYR2 804 aaPredicted RBP8.46□□□□□ -1.06
CCDC38-204ENST00000546816 FAM181AQ8N9Y4 354 aa8.46□□□□□ -1.06
CCDC38-204ENST00000546816 PIDD1Q9HB75 910 aa8.46□□□□□ -1.06
CCDC38-204ENST00000546816 TRAK1Q9UPV9 953 aa8.46□□□□□ -1.06
CCDC38-204ENST00000546816 BIN1O00499 593 aa8.45□□□□□ -1.06
CCDC38-204ENST00000546816 GADD45BO75293 160 aaPredicted RBP8.45□□□□□ -1.06
CCDC38-204ENST00000546816 CD8BP10966 210 aa8.45□□□□□ -1.06
CCDC38-204ENST00000546816 PDZD3Q86UT5 571 aa8.45□□□□□ -1.06
CCDC38-204ENST00000546816 NIF3L1Q9GZT8 377 aa8.45□□□□□ -1.06
CCDC38-204ENST00000546816 VAV3Q9UKW4 847 aa8.45□□□□□ -1.06
CCDC38-204ENST00000546816 SUPT5HO00267 1087 aaKnown RBP8.44□□□□□ -1.06
CCDC38-204ENST00000546816 PRKCQQ04759 706 aa8.44□□□□□ -1.06
CCDC38-204ENST00000546816 TTLL4Q14679 1199 aa8.44□□□□□ -1.06
CCDC38-204ENST00000546816 ATG4DQ86TL0 474 aaPredicted RBP8.44□□□□□ -1.06
CCDC38-204ENST00000546816 EPS8L3Q8TE67 593 aaKnown RBP8.44□□□□□ -1.06
CCDC38-204ENST00000546816 MKNK2Q9HBH9 465 aa8.44□□□□□ -1.06
CCDC38-204ENST00000546816 MBNL3Q9NUK0 354 aaKnown RBP8.44□□□□□ -1.06
CCDC38-204ENST00000546816 LEFTY1O75610 366 aa8.43□□□□□ -1.06
CCDC38-204ENST00000546816 RNASE1P07998 156 aaKnown RBP8.43□□□□□ -1.06
CCDC38-204ENST00000546816 ALKBH8Q96BT7 664 aaKnown RBP8.43□□□□□ -1.06
CCDC38-204ENST00000546816 CSRNP1Q96S65 589 aa8.43□□□□□ -1.06
CCDC38-204ENST00000546816 ADAMTS6Q9UKP5 1117 aa8.43□□□□□ -1.06
CCDC38-204ENST00000546816 OXCT1P55809 520 aa8.42□□□□□ -1.06
CCDC38-204ENST00000546816 ZNF648Q5T619 568 aaPredicted RBP8.42□□□□□ -1.06
CCDC38-204ENST00000546816 TXNDC2Q86VQ3 553 aa8.42□□□□□ -1.06
CCDC38-204ENST00000546816 ARID3AQ99856 593 aa8.42□□□□□ -1.06
CCDC38-204ENST00000546816 DUSP23Q9BVJ7 150 aa8.42□□□□□ -1.06
CCDC38-204ENST00000546816 PCOLCE2Q9UKZ9 415 aa8.42□□□□□ -1.06
CCDC38-204ENST00000546816 NEFMP07197 916 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms