RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 DIXDC1Q155Q3 683 aa23.25■■□□□ 1.31
CHPT1-202ENST00000546490 CCL15Q16663 113 aa23.25■■□□□ 1.31
CHPT1-202ENST00000546490 CNKSR2Q8WXI2 1034 aa23.25■■□□□ 1.31
CHPT1-202ENST00000546490 MS4A4AQ96JQ5 239 aa23.25■■□□□ 1.31
CHPT1-202ENST00000546490 PTPN18Q99952 460 aa23.25■■□□□ 1.31
CHPT1-202ENST00000546490 TRIM17Q9Y577 477 aa23.25■■□□□ 1.31
CHPT1-202ENST00000546490 ZBTB22O15209 634 aa23.24■■□□□ 1.31
CHPT1-202ENST00000546490 TRIM27P14373 513 aa23.24■■□□□ 1.31
CHPT1-202ENST00000546490 MTX1Q13505 466 aa23.24■■□□□ 1.31
CHPT1-202ENST00000546490 ZGPATQ8N5A5 531 aaKnown RBP23.24■■□□□ 1.31
CHPT1-202ENST00000546490 SNCAIPQ9Y6H5 919 aa23.24■■□□□ 1.31
CHPT1-202ENST00000546490 ADORA1P30542 326 aa23.23■■□□□ 1.31
CHPT1-202ENST00000546490 CCDC102BQ68D86 513 aa23.23■■□□□ 1.31
CHPT1-202ENST00000546490 ATF7IPQ6VMQ6 1270 aa23.23■■□□□ 1.31
CHPT1-202ENST00000546490 ERO1BQ86YB8 467 aa23.23■■□□□ 1.31
CHPT1-202ENST00000546490 FAM151AQ8WW52 585 aa23.23■■□□□ 1.31
CHPT1-202ENST00000546490 BRI3BPQ8WY22 251 aa23.23■■□□□ 1.31
CHPT1-202ENST00000546490 ZNF341Q9BYN7 854 aa23.23■■□□□ 1.31
CHPT1-202ENST00000546490 CENPFP49454 3210 aa23.22■■□□□ 1.31
CHPT1-202ENST00000546490 CDC42EP5Q6NZY7 148 aa23.22■■□□□ 1.31
CHPT1-202ENST00000546490 OTOP1Q7RTM1 612 aa23.22■■□□□ 1.31
CHPT1-202ENST00000546490 FRAT1Q92837 279 aaPredicted RBP23.22■■□□□ 1.31
CHPT1-202ENST00000546490 AKAP2Q9Y2D5 859 aa23.22■■□□□ 1.31
CHPT1-202ENST00000546490 PDS5AQ29RF7 1337 aaKnown RBP23.22■■□□□ 1.31
CHPT1-202ENST00000546490 TAF1CQ15572 869 aaPredicted RBP23.21■■□□□ 1.31
CHPT1-202ENST00000546490 CD99L2Q8TCZ2 262 aa23.21■■□□□ 1.31
CHPT1-202ENST00000546490 ZKSCAN4Q969J2 545 aaPredicted RBP23.21■■□□□ 1.31
CHPT1-202ENST00000546490 MAST2Q6P0Q8 1798 aa23.2■■□□□ 1.3
CHPT1-202ENST00000546490 A0A1B0GUL7 405 aa23.2■■□□□ 1.3
CHPT1-202ENST00000546490 WDHD1O75717 1129 aaPredicted RBP23.2■■□□□ 1.3
CHPT1-202ENST00000546490 SP3Q02447 781 aa23.2■■□□□ 1.3
CHPT1-202ENST00000546490 TCP10Q12799 353 aa23.2■■□□□ 1.3
CHPT1-202ENST00000546490 RASGRF1Q13972 1273 aa23.2■■□□□ 1.3
CHPT1-202ENST00000546490 MVPQ14764 893 aaKnown RBP23.2■■□□□ 1.3
CHPT1-202ENST00000546490 DZIP1Q86YF9 867 aaKnown RBP23.2■■□□□ 1.3
CHPT1-202ENST00000546490 ZFYVE28Q9HCC9 887 aa23.2■■□□□ 1.3
CHPT1-202ENST00000546490 BCAR3O75815 825 aa23.19■■□□□ 1.3
CHPT1-202ENST00000546490 GNAI2P04899 355 aa23.19■■□□□ 1.3
CHPT1-202ENST00000546490 CETPP11597 493 aa23.19■■□□□ 1.3
CHPT1-202ENST00000546490 NFIAQ12857 509 aa23.19■■□□□ 1.3
CHPT1-202ENST00000546490 PPIL2Q13356 520 aa23.19■■□□□ 1.3
CHPT1-202ENST00000546490 DOCK1Q14185 1865 aa23.19■■□□□ 1.3
CHPT1-202ENST00000546490 TIMM10P62072 90 aa23.18■■□□□ 1.3
CHPT1-202ENST00000546490 TFCP2Q12800 502 aa23.18■■□□□ 1.3
CHPT1-202ENST00000546490 SNAPC2Q13487 334 aa23.18■■□□□ 1.3
CHPT1-202ENST00000546490 MIGA2Q7L4E1 593 aa23.18■■□□□ 1.3
CHPT1-202ENST00000546490 SLF2Q8IX21 1173 aa23.18■■□□□ 1.3
CHPT1-202ENST00000546490 FAM43AQ8N2R8 423 aa23.18■■□□□ 1.3
CHPT1-202ENST00000546490 EFCC1Q9HA90 598 aa23.18■■□□□ 1.3
CHPT1-202ENST00000546490 ZCCHC17Q9NP64 241 aaKnown RBP23.18■■□□□ 1.3
CHPT1-202ENST00000546490 USP40Q9NVE5 1235 aa23.18■■□□□ 1.3
CHPT1-202ENST00000546490 ZSWIM8A7E2V4 1837 aa23.17■■□□□ 1.3
CHPT1-202ENST00000546490 GAKO14976 1311 aa23.17■■□□□ 1.3
CHPT1-202ENST00000546490 PPATQ06203 517 aa23.17■■□□□ 1.3
CHPT1-202ENST00000546490 SPTY2D1Q68D10 685 aaPredicted RBP23.17■■□□□ 1.3
CHPT1-202ENST00000546490 CLUAP1Q96AJ1 413 aa23.17■■□□□ 1.3
CHPT1-202ENST00000546490 XAGE2Q96GT9 111 aa23.17■■□□□ 1.3
CHPT1-202ENST00000546490 FAM198AQ9UFP1 575 aa23.17■■□□□ 1.3
CHPT1-202ENST00000546490 ABCF2Q9UG63 623 aa23.17■■□□□ 1.3
CHPT1-202ENST00000546490 TNNQ9UQP3 1299 aa23.17■■□□□ 1.3
CHPT1-202ENST00000546490 RFX7Q2KHR2 1363 aa23.16■■□□□ 1.3
CHPT1-202ENST00000546490 IRF6O14896 467 aa23.16■■□□□ 1.3
CHPT1-202ENST00000546490 INPP5BP32019 993 aa23.16■■□□□ 1.3
CHPT1-202ENST00000546490 PTPN22Q9Y2R2 807 aa23.16■■□□□ 1.3
CHPT1-202ENST00000546490 PTPRFP10586 1907 aa23.16■■□□□ 1.3
CHPT1-202ENST00000546490 ARHGEF6Q15052 776 aa23.15■■□□□ 1.3
CHPT1-202ENST00000546490 ZKSCAN2Q63HK3 967 aa23.15■■□□□ 1.3
CHPT1-202ENST00000546490 HNRNPUQ00839 825 aaKnown RBP eCLIP23.14■■□□□ 1.29
CHPT1-202ENST00000546490 NEUROD6Q96NK8 337 aa23.14■■□□□ 1.29
CHPT1-202ENST00000546490 IDI2Q9BXS1 227 aa23.14■■□□□ 1.29
CHPT1-202ENST00000546490 ZNF112Q9UJU3 913 aa23.14■■□□□ 1.29
CHPT1-202ENST00000546490 MROH7-TTC4A0A0A0MT08 1334 aa23.13■■□□□ 1.29
CHPT1-202ENST00000546490 ATAD5Q96QE3 1844 aa23.13■■□□□ 1.29
CHPT1-202ENST00000546490 BTBD19C9JJ37 291 aa23.13■■□□□ 1.29
CHPT1-202ENST00000546490 ENTPD3O75355 529 aa23.13■■□□□ 1.29
CHPT1-202ENST00000546490 RGS3P49796 1198 aa23.13■■□□□ 1.29
CHPT1-202ENST00000546490 NOL9Q5SY16 702 aaKnown RBP23.13■■□□□ 1.29
CHPT1-202ENST00000546490 GORABQ5T7V8 394 aa23.13■■□□□ 1.29
CHPT1-202ENST00000546490 ATRNL1Q5VV63 1379 aa23.13■■□□□ 1.29
CHPT1-202ENST00000546490 PHIPQ8WWQ0 1821 aa23.12■■□□□ 1.29
CHPT1-202ENST00000546490 PNMA6EA0A0J9YXQ4 647 aa23.12■■□□□ 1.29
CHPT1-202ENST00000546490 G3BP1Q13283 466 aaKnown RBP eCLIP23.12■■□□□ 1.29
CHPT1-202ENST00000546490 ERICH6Q7L0X2 663 aa23.12■■□□□ 1.29
CHPT1-202ENST00000546490 TMEM57Q8N5G2 664 aa23.12■■□□□ 1.29
CHPT1-202ENST00000546490 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.12■■□□□ 1.29
CHPT1-202ENST00000546490 BRCA2P51587 3418 aa23.12■■□□□ 1.29
CHPT1-202ENST00000546490 TLR2O60603 784 aa23.11■■□□□ 1.29
CHPT1-202ENST00000546490 BTDP43251 543 aa23.11■■□□□ 1.29
CHPT1-202ENST00000546490 FAM163AQ96GL9 167 aaPredicted RBP23.11■■□□□ 1.29
CHPT1-202ENST00000546490 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.11■■□□□ 1.29
CHPT1-202ENST00000546490 ZSCAN29Q8IWY8 852 aaPredicted RBP23.1■■□□□ 1.29
CHPT1-202ENST00000546490 ZFPM1Q8IX07 1006 aa23.1■■□□□ 1.29
CHPT1-202ENST00000546490 FTSJ3Q8IY81 847 aaKnown RBP23.1■■□□□ 1.29
CHPT1-202ENST00000546490 HMG20BQ9P0W2 317 aa23.1■■□□□ 1.29
CHPT1-202ENST00000546490 KCNH4Q9UQ05 1017 aa23.1■■□□□ 1.29
CHPT1-202ENST00000546490 CDK5RAP2Q96SN8 1893 aa23.1■■□□□ 1.29
CHPT1-202ENST00000546490 FOCADQ5VW36 1801 aa23.1■■□□□ 1.29
CHPT1-202ENST00000546490 MGAMO43451 1857 aa23.09■■□□□ 1.29
CHPT1-202ENST00000546490 ARID4AP29374 1257 aaPredicted RBP23.09■■□□□ 1.29
CHPT1-202ENST00000546490 CAP1Q01518 475 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms