RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 C4BP0C0L5 1744 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 CENPFP49454 3210 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 POLR3DP05423 398 aaPredicted RBP14.1□□□□□ -0.15
CCDC38-202ENST00000546386 TRDNQ13061 729 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 UBE4AQ14139 1066 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 DOK7Q18PE1 504 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
CCDC38-202ENST00000546386 ZSCAN25Q6NSZ9 544 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 MPNDQ8N594 471 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 NCOA7Q8NI08 942 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 SBF2Q86WG5 1849 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 MAGEB6P1A0A0J9YX57 407 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 POLRMTO00411 1230 aaKnown RBP14.1□□□□□ -0.15
CCDC38-202ENST00000546386 GNL3LQ9NVN8 582 aaKnown RBP14.1□□□□□ -0.15
CCDC38-202ENST00000546386 POLLQ9UGP5 575 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 CTNNA3Q9UI47 895 aa14.1□□□□□ -0.15
CCDC38-202ENST00000546386 PATL2C9JE40 543 aaKnown RBP14.09□□□□□ -0.15
CCDC38-202ENST00000546386 CHRNA5P30532 468 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 MCM5P33992 734 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 GRAPQ13588 217 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 ANKRD1Q15327 319 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 CAMK4Q16566 473 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 ZSCAN23Q3MJ62 389 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 MB21D2Q8IYB1 491 aaPredicted RBP14.09□□□□□ -0.15
CCDC38-202ENST00000546386 GRAPLQ8TC17 118 aaPredicted RBP14.09□□□□□ -0.15
CCDC38-202ENST00000546386 NUP133Q8WUM0 1156 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 ST5P78524 1137 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 FAM47AQ5JRC9 791 aa14.09□□□□□ -0.15
CCDC38-202ENST00000546386 NSUN7Q8NE18 718 aaKnown RBP14.09□□□□□ -0.15
CCDC38-202ENST00000546386 SAP30BPQ9UHR5 308 aaKnown RBP14.09□□□□□ -0.15
CCDC38-202ENST00000546386 USP17L12C9JPN9 530 aa14.08□□□□□ -0.16
CCDC38-202ENST00000546386 USP17L21D6R901 530 aa14.08□□□□□ -0.16
CCDC38-202ENST00000546386 RANBP6O60518 1105 aaKnown RBP14.08□□□□□ -0.16
CCDC38-202ENST00000546386 TNRC6CQ9HCJ0 1690 aaKnown RBP14.08□□□□□ -0.16
CCDC38-202ENST00000546386 CDC27P30260 824 aa14.08□□□□□ -0.16
CCDC38-202ENST00000546386 FBXO33Q7Z6M2 555 aa14.08□□□□□ -0.16
CCDC38-202ENST00000546386 ZNF512BQ96KM6 892 aaPredicted RBP14.08□□□□□ -0.16
CCDC38-202ENST00000546386 HPS5Q9UPZ3 1129 aa14.08□□□□□ -0.16
CCDC38-202ENST00000546386 IFIT3O14879 490 aaKnown RBP14.07□□□□□ -0.16
CCDC38-202ENST00000546386 FDPSP14324 419 aaKnown RBP14.07□□□□□ -0.16
CCDC38-202ENST00000546386 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
CCDC38-202ENST00000546386 TMEM67Q5HYA8 995 aa14.07□□□□□ -0.16
CCDC38-202ENST00000546386 DZIP1Q86YF9 867 aaKnown RBP14.07□□□□□ -0.16
CCDC38-202ENST00000546386 NSUN4Q96CB9 384 aaKnown RBP14.07□□□□□ -0.16
CCDC38-202ENST00000546386 NHSQ6T4R5 1651 aa14.07□□□□□ -0.16
CCDC38-202ENST00000546386 CPLX1O14810 134 aa14.07□□□□□ -0.16
CCDC38-202ENST00000546386 USP17L8P0C7I0 530 aa14.07□□□□□ -0.16
CCDC38-202ENST00000546386 ZNF772Q68DY9 489 aaPredicted RBP14.07□□□□□ -0.16
CCDC38-202ENST00000546386 MFSD6Q6ZSS7 791 aa14.07□□□□□ -0.16
CCDC38-202ENST00000546386 DYNLL2Q96FJ2 89 aa14.07□□□□□ -0.16
CCDC38-202ENST00000546386 A0A087WWV3 80 aa14.06□□□□□ -0.16
CCDC38-202ENST00000546386 TAF1LQ8IZX4 1826 aa14.06□□□□□ -0.16
CCDC38-202ENST00000546386 SLC27A3Q5K4L6 730 aa14.06□□□□□ -0.16
CCDC38-202ENST00000546386 SLC44A5Q8NCS7 719 aa14.06□□□□□ -0.16
CCDC38-202ENST00000546386 ERCC4Q92889 916 aaPredicted RBP14.06□□□□□ -0.16
CCDC38-202ENST00000546386 RIOK1Q9BRS2 568 aaKnown RBP14.06□□□□□ -0.16
CCDC38-202ENST00000546386 LAMA4Q16363 1823 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 RFX7Q2KHR2 1363 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 PFKFB2O60825 505 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 HMGB1P09429 215 aaKnown RBP14.05□□□□□ -0.16
CCDC38-202ENST00000546386 TTC6Q86TZ1 520 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 SCNN1DP51172 638 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 GTF2IP78347 998 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 PPARAQ07869 468 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 RASGRP2Q7LDG7 609 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 PPP1R1BQ9UD71 204 aaPredicted RBP14.05□□□□□ -0.16
CCDC38-202ENST00000546386 PCDHAC2Q9Y5I4 1007 aa14.05□□□□□ -0.16
CCDC38-202ENST00000546386 GUCY1A2P33402 732 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 GIMAP6Q6P9H5 292 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 CLEC17AQ6ZS10 378 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 MAPKAPK5Q8IW41 473 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 SH3RF3Q8TEJ3 882 aaPredicted RBP14.04□□□□□ -0.16
CCDC38-202ENST00000546386 DBNDD1Q9H9R9 158 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 GRPEL1Q9HAV7 217 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 MCM9Q9NXL9 1143 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 RTL9Q8NET4 1388 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 BAZ2AQ9UIF9 1905 aaKnown RBP14.04□□□□□ -0.16
CCDC38-202ENST00000546386 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 BCORQ6W2J9 1755 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 AKNAD1Q5T1N1 836 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
CCDC38-202ENST00000546386 TGFBRAP1Q8WUH2 860 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 ANKRD2Q9GZV1 360 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 ORC3Q9UBD5 711 aaPredicted RBP14.04□□□□□ -0.16
CCDC38-202ENST00000546386 MYH13Q9UKX3 1938 aa14.04□□□□□ -0.16
CCDC38-202ENST00000546386 IGDCC4Q8TDY8 1250 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 NACAP1Q9BZK3 213 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 ANGEL1Q9UNK9 670 aaKnown RBP14.03□□□□□ -0.16
CCDC38-202ENST00000546386 RREB1Q92766 1687 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 LAMB2P55268 1798 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 ATP2B1P20020 1258 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 METAP2P50579 478 aaKnown RBP eCLIP14.03□□□□□ -0.16
CCDC38-202ENST00000546386 CTR9Q6PD62 1173 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 TBC1D16Q8TBP0 767 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 RBSNQ9H1K0 784 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 GGA1Q9UJY5 639 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 PNPLA7Q6ZV29 1317 aa14.03□□□□□ -0.16
CCDC38-202ENST00000546386 LDHBP07195 334 aaKnown RBP14.02□□□□□ -0.16
CCDC38-202ENST00000546386 LIG1P18858 919 aa14.02□□□□□ -0.16
CCDC38-202ENST00000546386 PICALMQ13492 652 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms