RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RESP18Q5W5W9 173 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 ATG9AQ7Z3C6 839 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 METTL16Q86W50 562 aaKnown RBP16.3■□□□□ 0.2
SRP54-202ENST00000546080 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
SRP54-202ENST00000546080 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 SLC52A2Q9HAB3 445 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 SLIT3O75094 1523 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 CCDC151A5D8V7 595 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 CASP7P55210 303 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 HSP90AA4PQ58FG1 418 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 CCDC102BQ68D86 513 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 VPS37DQ86XT2 251 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 CCDC12Q8WUD4 166 aaPredicted RBP16.3■□□□□ 0.2
SRP54-202ENST00000546080 ALG1Q9BT22 464 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 PSD3Q9NYI0 1048 aa16.3■□□□□ 0.2
SRP54-202ENST00000546080 FAM237AA0A1B0GTK4 181 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
SRP54-202ENST00000546080 LMAN1P49257 510 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 BRD3Q15059 726 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 WASHC4Q2M389 1173 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 SPECC1LQ69YQ0 1117 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 ARHGEF25Q86VW2 580 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 TC2NQ8N9U0 490 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 RGS22Q8NE09 1264 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 GOLGA5Q8TBA6 731 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 ADAM21Q9UKJ8 722 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 PCDHA5Q9Y5H7 936 aa16.29■□□□□ 0.2
SRP54-202ENST00000546080 GCP02774 474 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 GYS2P54840 703 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 ADKP55263 362 aaKnown RBP16.28■□□□□ 0.2
SRP54-202ENST00000546080 ANTXR2P58335 489 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 KARSQ15046 597 aaKnown RBP16.28■□□□□ 0.2
SRP54-202ENST00000546080 PTPAQ15257 358 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 LONRF3Q496Y0 759 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 NFATC2IPQ8NCF5 419 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
SRP54-202ENST00000546080 CLIC6Q96NY7 704 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 TAOK2Q9UL54 1235 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 SPEF2Q9C093 1822 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 NWD2Q9ULI1 1742 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 CUTAO60888 179 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 FOXO4P98177 505 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 PDE4BQ07343 736 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
SRP54-202ENST00000546080 FGAP02671 866 aa16.27■□□□□ 0.2
SRP54-202ENST00000546080 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
SRP54-202ENST00000546080 FKBP4Q02790 459 aaKnown RBP eCLIP16.27■□□□□ 0.2
SRP54-202ENST00000546080 AIFM3Q96NN9 605 aa16.27■□□□□ 0.2
SRP54-202ENST00000546080 DESI2Q9BSY9 194 aa16.27■□□□□ 0.2
SRP54-202ENST00000546080 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.2
SRP54-202ENST00000546080 KCNH3Q9ULD8 1083 aa16.27■□□□□ 0.2
SRP54-202ENST00000546080 ZMYM6O95789 1325 aa16.27■□□□□ 0.19
SRP54-202ENST00000546080 A0A1B0GUL7 405 aa16.27■□□□□ 0.19
SRP54-202ENST00000546080 H3BQF6 201 aa16.27■□□□□ 0.19
SRP54-202ENST00000546080 CDKL5O76039 1030 aa16.27■□□□□ 0.19
SRP54-202ENST00000546080 CDC27P30260 824 aa16.27■□□□□ 0.19
SRP54-202ENST00000546080 CHMP4BP1P59074 171 aa16.27■□□□□ 0.19
SRP54-202ENST00000546080 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.19
SRP54-202ENST00000546080 KRT40Q6A162 431 aa16.27■□□□□ 0.19
SRP54-202ENST00000546080 FOXP4Q8IVH2 680 aaPredicted RBP16.27■□□□□ 0.19
SRP54-202ENST00000546080 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.19
SRP54-202ENST00000546080 CPDO75976 1380 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 WDR19Q8NEZ3 1342 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 ZNF213O14771 459 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 FOXP2O15409 715 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 TTC5Q8N0Z6 440 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 MAP3K14Q99558 947 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 ZSWIM4Q9H7M6 989 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 DACH1Q9UI36 760 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 NFE2L3Q9Y4A8 694 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 KDM6AO15550 1401 aaPredicted RBP16.26■□□□□ 0.19
SRP54-202ENST00000546080 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 DDX60Q8IY21 1712 aaKnown RBP16.26■□□□□ 0.19
SRP54-202ENST00000546080 MYO1CO00159 1063 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 MAP2K7O14733 419 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 ZFYP08048 801 aaPredicted RBP16.26■□□□□ 0.19
SRP54-202ENST00000546080 CCDC175P0C221 793 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 BMP6P22004 513 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 TNNT3P45378 269 aaPredicted RBP16.26■□□□□ 0.19
SRP54-202ENST00000546080 METAP2P50579 478 aaKnown RBP eCLIP16.26■□□□□ 0.19
SRP54-202ENST00000546080 LRRC24Q50LG9 513 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 SRGAP1Q7Z6B7 1085 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.26■□□□□ 0.19
SRP54-202ENST00000546080 RAI14Q9P0K7 980 aa16.26■□□□□ 0.19
SRP54-202ENST00000546080 POTEB2H3BUK9 544 aa16.25■□□□□ 0.19
SRP54-202ENST00000546080 PDE4CQ08493 712 aa16.25■□□□□ 0.19
SRP54-202ENST00000546080 TRIM29Q14134 588 aa16.25■□□□□ 0.19
SRP54-202ENST00000546080 TTC39AQ5SRH9 613 aa16.25■□□□□ 0.19
SRP54-202ENST00000546080 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
SRP54-202ENST00000546080 C10orf67Q8IYJ2 551 aa16.25■□□□□ 0.19
SRP54-202ENST00000546080 MRPL44Q9H9J2 332 aaKnown RBP16.25■□□□□ 0.19
SRP54-202ENST00000546080 MAN1B1Q9UKM7 699 aa16.25■□□□□ 0.19
SRP54-202ENST00000546080 EYA2O00167 538 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms