RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 RPS8P62241 208 aaKnown RBP9.86□□□□□ -0.83
CLIP1-218ENST00000545889 SSRP1Q08945 709 aaKnown RBP9.86□□□□□ -0.83
CLIP1-218ENST00000545889 TSG101Q99816 390 aa9.86□□□□□ -0.83
CLIP1-218ENST00000545889 MCM9Q9NXL9 1143 aa9.86□□□□□ -0.83
CLIP1-218ENST00000545889 ALDH1B1P30837 517 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 ANAPC15P60006 121 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 ESR2Q92731 530 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 SPATA32Q96LK8 384 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 PAG1Q9NWQ8 432 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 SLC4A4Q9Y6R1 1079 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 SHPRHQ149N8 1683 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 ANKRD62A6NC57 917 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 ERVV-1B6SEH8 477 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 ERLIN2O94905 339 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 SERPINB2P05120 415 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 TLR7Q9NYK1 1049 aaKnown RBP9.85□□□□□ -0.83
CLIP1-218ENST00000545889 PEAK1Q9H792 1746 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 COL15A1P39059 1388 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 SYCE3A1L190 88 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 UBA7P41226 1012 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 IARSP41252 1262 aaKnown RBP9.85□□□□□ -0.83
CLIP1-218ENST00000545889 GNAQP50148 359 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 SLC9C2Q5TAH2 1124 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 TBC1D9BQ66K14 1250 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 FERMT2Q96AC1 680 aa9.85□□□□□ -0.83
CLIP1-218ENST00000545889 ZFYP08048 801 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-218ENST00000545889 TCERG1LQ5VWI1 586 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 CCDC174Q6PII3 467 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 CALML4Q96GE6 196 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 CSADQ9Y600 493 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 H7C1W4 665 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 BACH1O14867 736 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 NMIQ13287 307 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-218ENST00000545889 TEX35Q5T0J7 233 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 FERMT3Q86UX7 667 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 ERMNQ8TAM6 284 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 PRIMPOLQ96LW4 560 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 SP4Q02446 784 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 DLGAP5Q15398 846 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 SEPT7Q16181 437 aaKnown RBP9.84□□□□□ -0.83
CLIP1-218ENST00000545889 TCEANC2Q96MN5 208 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 C6orf50Q9HD87 102 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 ANKRD26Q9UPS8 1709 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 PTPN12Q05209 780 aaKnown RBP9.84□□□□□ -0.83
CLIP1-218ENST00000545889 RAB3GAP1Q15042 981 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 SKIDA1Q1XH10 827 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 DEFB132Q7Z7B7 95 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 CCDC144CPQ8IYA2 1237 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 NLGN1Q8N2Q7 840 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 MYRIPQ8NFW9 859 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 TNMDQ9H2S6 317 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 SPC25Q9HBM1 224 aa9.84□□□□□ -0.83
CLIP1-218ENST00000545889 TTC41PQ6P2S7 1318 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 ESYT1Q9BSJ8 1104 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 COPRSQ9NQ92 184 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 NARFQ9UHQ1 456 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 ROBO1Q9Y6N7 1651 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 SPDYE3A6NKU9 549 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 MMP10P09238 476 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 ADORA1P30542 326 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 OTUD7BQ6GQQ9 843 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 MIGA1Q8NAN2 632 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 BANK1Q8NDB2 785 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 TTLL11Q8NHH1 800 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-218ENST00000545889 SLIT3O75094 1523 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 IBTKQ9P2D0 1353 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-218ENST00000545889 TBCAO75347 108 aaKnown RBP9.83□□□□□ -0.84
CLIP1-218ENST00000545889 GSPT1P15170 499 aaKnown RBP9.83□□□□□ -0.84
CLIP1-218ENST00000545889 SSFA2P28290 1259 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 USP8P40818 1118 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 GUCY1B3Q02153 619 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 PUM3Q15397 648 aaKnown RBP9.83□□□□□ -0.84
CLIP1-218ENST00000545889 HSP90B2PQ58FF3 399 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 CCDC129Q6ZRS4 1044 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 SPC24Q8NBT2 197 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 SLC4A9Q96Q91 983 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 PUF60Q9UHX1 559 aaKnown RBP9.83□□□□□ -0.84
CLIP1-218ENST00000545889 CHMLP26374 656 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 WTAPQ15007 396 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 VPS36Q86VN1 386 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 TEX11Q8IYF3 940 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 C17orf53Q8N3J3 647 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-218ENST00000545889 NCOA7Q8NI08 942 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 ACBD3Q9H3P7 528 aa9.83□□□□□ -0.84
CLIP1-218ENST00000545889 MCM5P33992 734 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 GYG1P46976 350 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 KLHL10Q6JEL2 608 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 USP48Q86UV5 1035 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 TBC1D32Q96NH3 1257 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 ISCA1Q9BUE6 129 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 COMMD10Q9Y6G5 202 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 LTN1O94822 1766 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 MAGEB6P1A0A0J9YX57 407 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 MACROD2A1Z1Q3 448 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 STX6O43752 255 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 LPXNO60711 386 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 SASH1O94885 1247 aa9.82□□□□□ -0.84
CLIP1-218ENST00000545889 ZRSR2Q15696 482 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms