RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 M0R2C6 588 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 MCCP23508 829 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 DIXDC1Q155Q3 683 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 GRIK5Q16478 980 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 ADGRA1Q86SQ6 560 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 MAP4K1Q92918 833 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 L3MBTL3Q96JM7 780 aaPredicted RBP19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 CTNNA3Q9UI47 895 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 ZNF541Q9H0D2 1346 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 DDX60LQ5H9U9 1706 aaKnown RBP19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 UTRNP46939 3433 aa19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 BTDP43251 543 aa19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 NT5C2P49902 561 aa19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 FKBP1CQ5VVH2 108 aa19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 ZNF589Q86UQ0 364 aaPredicted RBP19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 LSG1Q9H089 658 aaKnown RBP19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 COL2A1P02458 1487 aaPredicted RBP19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 ADAMTSL1Q8N6G6 1762 aa19.16■□□□□ 0.66
PRPF40A-212ENST00000545856 MYH1P12882 1939 aa19.15■□□□□ 0.66
PRPF40A-212ENST00000545856 PATL2C9JE40 543 aaKnown RBP19.15■□□□□ 0.66
PRPF40A-212ENST00000545856 H7C1D1 291 aa19.15■□□□□ 0.66
PRPF40A-212ENST00000545856 HSPD1P10809 573 aaKnown RBP19.15■□□□□ 0.66
PRPF40A-212ENST00000545856 GMPSP49915 693 aaPredicted RBP19.15■□□□□ 0.66
PRPF40A-212ENST00000545856 RNF20Q5VTR2 975 aa19.15■□□□□ 0.66
PRPF40A-212ENST00000545856 SEC62Q99442 399 aaKnown RBP19.15■□□□□ 0.66
PRPF40A-212ENST00000545856 AATFQ9NY61 560 aaKnown RBP eCLIP19.15■□□□□ 0.66
PRPF40A-212ENST00000545856 GLTPD2A6NH11 291 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 SPDYE2BA6NHP3 402 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 F8W031 263 aaPredicted RBP19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 MYO1BO43795 1136 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 SPDYE6P0CI01 402 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 LMOD1P29536 600 aaPredicted RBP19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 ANAPC15P60006 121 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 DLGAP5Q15398 846 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 APOBEC3HQ6NTF7 200 aaKnown RBP19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 LCORLQ8N3X6 602 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 ZBED3Q96IU2 234 aaPredicted RBP19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 MXD3Q9BW11 206 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 GPRC5DQ9NZD1 345 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 GJA3Q9Y6H8 435 aa19.14■□□□□ 0.65
PRPF40A-212ENST00000545856 RHBDL3P58872 404 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 CFAP100Q494V2 611 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 MIGA1Q8NAN2 632 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 IDI2Q9BXS1 227 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 USP26Q9BXU7 913 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 IL25Q9H293 177 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 ARMT1Q9H993 441 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 MYOZ2Q9NPC6 264 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 TMOD2Q9NZR1 351 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 ZBTB12Q9Y330 459 aaPredicted RBP19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 SLC4A4Q9Y6R1 1079 aa19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 BAZ2AQ9UIF9 1905 aaKnown RBP19.13■□□□□ 0.65
PRPF40A-212ENST00000545856 IQCA1LA6NCM1 817 aa19.12■□□□□ 0.65
PRPF40A-212ENST00000545856 CHGBP05060 677 aa19.12■□□□□ 0.65
PRPF40A-212ENST00000545856 SCNN1DP51172 638 aa19.12■□□□□ 0.65
PRPF40A-212ENST00000545856 AMOTL1Q8IY63 956 aa19.12■□□□□ 0.65
PRPF40A-212ENST00000545856 IL17RAQ96F46 866 aa19.12■□□□□ 0.65
PRPF40A-212ENST00000545856 ARPP21Q9UBL0 812 aaPredicted RBP19.12■□□□□ 0.65
PRPF40A-212ENST00000545856 CNOT7Q9UIV1 285 aaKnown RBP19.12■□□□□ 0.65
PRPF40A-212ENST00000545856 RBM25P49756 843 aaKnown RBP19.11■□□□□ 0.65
PRPF40A-212ENST00000545856 RBM5P52756 815 aaKnown RBP eCLIP19.11■□□□□ 0.65
PRPF40A-212ENST00000545856 MICALL2Q8IY33 904 aa19.11■□□□□ 0.65
PRPF40A-212ENST00000545856 TEX11Q8IYF3 940 aa19.11■□□□□ 0.65
PRPF40A-212ENST00000545856 GSG1L2A8MUP6 293 aa19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 PCP11498 1178 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 HSPA4P34932 840 aa19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 TNFAIP1Q13829 316 aa19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 CCDC129Q6ZRS4 1044 aa19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 IFNL3Q8IZI9 196 aa19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 KCNB2Q92953 911 aa19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 NAPBQ9H115 298 aa19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 ADARB2Q9NS39 739 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-212ENST00000545856 ENTPD3O75355 529 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 ZKSCAN1P17029 563 aaPredicted RBP19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 USP5P45974 858 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 DYNLL1P63167 89 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 KRT32Q14532 448 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 NECTIN1Q15223 517 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 IMMTQ16891 758 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 TSGA10IPQ3SY00 556 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 SPDYE2Q495Y8 402 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 SLFNL1Q499Z3 407 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 SBK1Q52WX2 424 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 USP40Q9NVE5 1235 aa19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 MKRN1Q9UHC7 482 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 RBM8AQ9Y5S9 174 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-212ENST00000545856 SEC24BO95487 1268 aa19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 APPP05067 770 aa19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 TDO2P48775 406 aa19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 CDC42EP5Q6NZY7 148 aa19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 FAM83AQ86UY5 434 aa19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 SH3RF3Q8TEJ3 882 aaPredicted RBP19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 TBC1D32Q96NH3 1257 aa19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 C22orf23Q9BZE7 217 aa19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 DHX36Q9H2U1 1008 aaKnown RBP19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 DCP1AQ9NPI6 582 aaPredicted RBP19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 ANAPC4Q9UJX5 808 aa19.08■□□□□ 0.65
PRPF40A-212ENST00000545856 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.64
PRPF40A-212ENST00000545856 PITPNM2Q9BZ72 1349 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms