RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PNMA6EA0A0J9YXQ4 647 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 SLC4A8Q2Y0W8 1093 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 ZNF569Q5MCW4 686 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 TMEM2Q9UHN6 1383 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 CCDC65Q8IXS2 484 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 NCKAP5LQ9HCH0 1330 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 TNNC1P63316 161 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 V9GYY5 206 aaPredicted RBP14.12□□□□□ -0.15
COL4A6-209ENST00000545689 HSP90AA4PQ58FG1 418 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 CNNM4Q6P4Q7 775 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 ARFGAP2Q8N6H7 521 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 IBTKQ9P2D0 1353 aaPredicted RBP14.12□□□□□ -0.15
COL4A6-209ENST00000545689 B4DLN1 442 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 MRPL12P52815 198 aaKnown RBP14.12□□□□□ -0.15
COL4A6-209ENST00000545689 NUP58Q9BVL2 599 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 IKBKGQ9Y6K9 419 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 ERVK-7P63135 1459 aa14.12□□□□□ -0.15
COL4A6-209ENST00000545689 HDXQ7Z353 690 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 LPIN2Q92539 896 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 LZTS2Q9BRK4 669 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 NF2P35240 595 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 TNNI2P48788 182 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 IQCDQ96DY2 449 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 ACSBG1Q96GR2 724 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 RBM17Q96I25 401 aaKnown RBP14.11□□□□□ -0.15
COL4A6-209ENST00000545689 GPAA1O43292 621 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 CPA1P15085 419 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 CYP26C1Q6V0L0 522 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 TTC14Q96N46 770 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 FAM227BQ96M60 508 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 PICALMQ13492 652 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 C6orf163Q5TEZ5 329 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 NBPF11Q86T75 865 aa14.11□□□□□ -0.15
COL4A6-209ENST00000545689 B4E1Z4 1266 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 TOM1O60784 492 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 CBX8Q9HC52 389 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 GUCA1BQ9UMX6 200 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 SAMD9LQ8IVG5 1584 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 PRDM15P57071 1507 aaPredicted RBP14.1□□□□□ -0.15
COL4A6-209ENST00000545689 VAV2P52735 878 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 MCM6Q14566 821 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 STX17P56962 302 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 ERBB4Q15303 1308 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 OGFOD1Q8N543 542 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 IMPG2Q9BZV3 1241 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 ATP2A1O14983 1001 aa14.1□□□□□ -0.15
COL4A6-209ENST00000545689 PUF60Q9UHX1 559 aaKnown RBP14.1□□□□□ -0.15
COL4A6-209ENST00000545689 VWA3AA6NCI4 1184 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 FANCCQ00597 558 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 ZC3H12CQ9C0D7 883 aaKnown RBP14.09□□□□□ -0.15
COL4A6-209ENST00000545689 SH2D4AQ9H788 454 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 CTNND2Q9UQB3 1225 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 RGS12O14924 1447 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 MAST3O60307 1309 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 SYNRGQ9UMZ2 1314 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 KARSQ15046 597 aaKnown RBP14.09□□□□□ -0.15
COL4A6-209ENST00000545689 HELBQ8NG08 1087 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-209ENST00000545689 SREK1Q8WXA9 508 aaKnown RBP14.09□□□□□ -0.15
COL4A6-209ENST00000545689 LZTFL1Q9NQ48 299 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 TIMM10P62072 90 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 UBE4AQ14139 1066 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 IGSF22Q8N9C0 903 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 CABLES1Q8TDN4 633 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 ZNF274Q96GC6 653 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-209ENST00000545689 TSNARE1Q96NA8 513 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 NAPGQ99747 312 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-209ENST00000545689 PLEKHF1Q96S99 279 aa14.09□□□□□ -0.15
COL4A6-209ENST00000545689 PPP2R3AQ06190 1150 aa14.08□□□□□ -0.15
COL4A6-209ENST00000545689 GTF3C6Q969F1 213 aa14.08□□□□□ -0.15
COL4A6-209ENST00000545689 DRC1Q96MC2 740 aa14.08□□□□□ -0.15
COL4A6-209ENST00000545689 LGR6Q9HBX8 967 aa14.08□□□□□ -0.15
COL4A6-209ENST00000545689 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 ANKS4BQ8N8V4 417 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 HOMER2Q9NSB8 354 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 KIF4AO95239 1232 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 HIBADHP31937 336 aaKnown RBP14.08□□□□□ -0.16
COL4A6-209ENST00000545689 ZNF174Q15697 407 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 LRRC45Q96CN5 670 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 A0A1W2PRG0 241 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 RXRAP19793 462 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 CCDC122Q5T0U0 273 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 DIS3L2Q8IYB7 885 aaKnown RBP14.08□□□□□ -0.16
COL4A6-209ENST00000545689 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.16
COL4A6-209ENST00000545689 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
COL4A6-209ENST00000545689 PHACTR2O75167 634 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 GSPT1P15170 499 aaKnown RBP14.08□□□□□ -0.16
COL4A6-209ENST00000545689 TTC38Q5R3I4 469 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 HAUS3Q68CZ6 603 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 MRVI1Q9Y6F6 885 aa14.08□□□□□ -0.16
COL4A6-209ENST00000545689 A6NNZ2 444 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 NEURL1BA8MQ27 555 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 TUBB8Q3ZCM7 444 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 MSANTD4Q8NCY6 345 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 MYRIPQ8NFW9 859 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 FAM89AQ96GI7 184 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 NOC4LQ9BVI4 516 aaKnown RBP14.07□□□□□ -0.16
COL4A6-209ENST00000545689 ARMT1Q9H993 441 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms