RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 MAGEB6Q8N7X4 407 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 PRMT6Q96LA8 375 aaPredicted RBP14.2□□□□□ -0.14
SNHG1-221ENST00000544983 FSD1Q9BTV5 496 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 TMOD2Q9NZR1 351 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 RNF113AO15541 343 aaKnown RBP14.19□□□□□ -0.14
SNHG1-221ENST00000544983 NBPF9Q3BBW0 867 aa14.19□□□□□ -0.14
SNHG1-221ENST00000544983 RBM46Q8TBY0 533 aaKnown RBP14.19□□□□□ -0.14
SNHG1-221ENST00000544983 ZNF384Q8TF68 577 aa14.19□□□□□ -0.14
SNHG1-221ENST00000544983 DCPSQ96C86 337 aaKnown RBP14.19□□□□□ -0.14
SNHG1-221ENST00000544983 EDC3Q96F86 508 aaKnown RBP14.19□□□□□ -0.14
SNHG1-221ENST00000544983 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
SNHG1-221ENST00000544983 TCRBV5S4A2TA0A5A2 114 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
SNHG1-221ENST00000544983 EGFRP00533 1210 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 BTDP43251 543 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 TNNI2P48788 182 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 BMP2KLQ5H9B9 411 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 SMC1BQ8NDV3 1235 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 PPP2R3BQ9Y5P8 575 aa14.18□□□□□ -0.14
SNHG1-221ENST00000544983 ZNF532Q9HCE3 1301 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 MYO5AQ9Y4I1 1855 aaKnown RBP14.17□□□□□ -0.14
SNHG1-221ENST00000544983 FSTL1Q12841 308 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 CDC37L1Q7L3B6 337 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 FAM83AQ86UY5 434 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 SULF1Q8IWU6 871 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 APPBP2Q92624 585 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 RILPL2Q969X0 211 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 USP40Q9NVE5 1235 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 GGA3Q9NZ52 723 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 ZNF70Q9UC06 446 aaPredicted RBP14.17□□□□□ -0.14
SNHG1-221ENST00000544983 ECM29Q5VYK3 1845 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 MYH7P12883 1935 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 ADAMTSL1Q8N6G6 1762 aa14.17□□□□□ -0.14
SNHG1-221ENST00000544983 MAGEB6P1A0A0J9YX57 407 aa14.16□□□□□ -0.14
SNHG1-221ENST00000544983 RGS3P49796 1198 aa14.16□□□□□ -0.14
SNHG1-221ENST00000544983 ANGEL2Q5VTE6 544 aaKnown RBP14.16□□□□□ -0.14
SNHG1-221ENST00000544983 CDC42EP5Q6NZY7 148 aa14.16□□□□□ -0.14
SNHG1-221ENST00000544983 IDI2Q9BXS1 227 aa14.16□□□□□ -0.14
SNHG1-221ENST00000544983 TDRD3Q9H7E2 651 aaKnown RBP14.16□□□□□ -0.14
SNHG1-221ENST00000544983 GTF3C3Q9Y5Q9 886 aa14.16□□□□□ -0.14
SNHG1-221ENST00000544983 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
SNHG1-221ENST00000544983 SDSP20132 328 aa14.15□□□□□ -0.14
SNHG1-221ENST00000544983 RHBDL3P58872 404 aa14.15□□□□□ -0.14
SNHG1-221ENST00000544983 ZMYM1Q5SVZ6 1142 aa14.15□□□□□ -0.14
SNHG1-221ENST00000544983 KRT26Q7Z3Y9 468 aa14.15□□□□□ -0.14
SNHG1-221ENST00000544983 TNS4Q8IZW8 715 aa14.15□□□□□ -0.14
SNHG1-221ENST00000544983 HOOK2Q96ED9 719 aa14.15□□□□□ -0.14
SNHG1-221ENST00000544983 HELLSQ9NRZ9 838 aa14.15□□□□□ -0.14
SNHG1-221ENST00000544983 AATFQ9NY61 560 aaKnown RBP eCLIP14.15□□□□□ -0.14
SNHG1-221ENST00000544983 ENTPD3O75355 529 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 GNAT2P19087 354 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 APLP1P51693 650 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 MFAP1P55081 439 aaKnown RBP14.14□□□□□ -0.15
SNHG1-221ENST00000544983 ADGRA1Q86SQ6 560 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 TEX11Q8IYF3 940 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 RUFY2Q8WXA3 655 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 AIDAQ96BJ3 306 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 RIOK1Q9BRS2 568 aaKnown RBP14.14□□□□□ -0.15
SNHG1-221ENST00000544983 CRNKL1Q9BZJ0 848 aaKnown RBP14.14□□□□□ -0.15
SNHG1-221ENST00000544983 VEZTQ9HBM0 779 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 DIAPH3Q9NSV4 1193 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 PCDHAC2Q9Y5I4 1007 aa14.14□□□□□ -0.15
SNHG1-221ENST00000544983 AK9Q5TCS8 1911 aa14.13□□□□□ -0.15
SNHG1-221ENST00000544983 RPAP1Q9BWH6 1393 aaPredicted RBP14.13□□□□□ -0.15
SNHG1-221ENST00000544983 CLRN2A0PK11 232 aa14.13□□□□□ -0.15
SNHG1-221ENST00000544983 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
SNHG1-221ENST00000544983 POTEJP0CG39 1038 aa14.13□□□□□ -0.15
SNHG1-221ENST00000544983 MIGA1Q8NAN2 632 aa14.13□□□□□ -0.15
SNHG1-221ENST00000544983 FAM151AQ8WW52 585 aa14.13□□□□□ -0.15
SNHG1-221ENST00000544983 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
SNHG1-221ENST00000544983 DEFB129Q9H1M3 183 aa14.13□□□□□ -0.15
SNHG1-221ENST00000544983 WDHD1O75717 1129 aaPredicted RBP14.12□□□□□ -0.15
SNHG1-221ENST00000544983 NF2P35240 595 aa14.12□□□□□ -0.15
SNHG1-221ENST00000544983 SUPT20HL1Q3ZLR7 823 aa14.12□□□□□ -0.15
SNHG1-221ENST00000544983 MCMDC2Q4G0Z9 681 aa14.12□□□□□ -0.15
SNHG1-221ENST00000544983 MAP1SQ66K74 1059 aaPredicted RBP14.12□□□□□ -0.15
SNHG1-221ENST00000544983 GIMAP6Q6P9H5 292 aa14.12□□□□□ -0.15
SNHG1-221ENST00000544983 OSBP2Q969R2 916 aa14.12□□□□□ -0.15
SNHG1-221ENST00000544983 DHX36Q9H2U1 1008 aaKnown RBP14.12□□□□□ -0.15
SNHG1-221ENST00000544983 ATP8A2Q9NTI2 1148 aa14.12□□□□□ -0.15
SNHG1-221ENST00000544983 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
SNHG1-221ENST00000544983 POLR2AP24928 1970 aaKnown RBP14.12□□□□□ -0.15
SNHG1-221ENST00000544983 ASTN2O75129 1339 aaPredicted RBP14.12□□□□□ -0.15
SNHG1-221ENST00000544983 COL2A1P02458 1487 aaPredicted RBP14.12□□□□□ -0.15
SNHG1-221ENST00000544983 TCP10L2B9ZVM9 353 aa14.11□□□□□ -0.15
SNHG1-221ENST00000544983 MBD4O95243 580 aa14.11□□□□□ -0.15
SNHG1-221ENST00000544983 ITGBL1O95965 494 aaPredicted RBP14.11□□□□□ -0.15
SNHG1-221ENST00000544983 RASA3Q14644 834 aa14.11□□□□□ -0.15
SNHG1-221ENST00000544983 CASC1Q6TDU7 716 aa14.11□□□□□ -0.15
SNHG1-221ENST00000544983 SH3RF3Q8TEJ3 882 aaPredicted RBP14.11□□□□□ -0.15
SNHG1-221ENST00000544983 STRBPQ96SI9 672 aaKnown RBP14.11□□□□□ -0.15
SNHG1-221ENST00000544983 PUS7LQ9H0K6 701 aaKnown RBP14.11□□□□□ -0.15
SNHG1-221ENST00000544983 RAD50Q92878 1312 aa14.11□□□□□ -0.15
SNHG1-221ENST00000544983 GPAA1O43292 621 aa14.1□□□□□ -0.15
SNHG1-221ENST00000544983 USP5P45974 858 aa14.1□□□□□ -0.15
SNHG1-221ENST00000544983 DYNLL1P63167 89 aaKnown RBP14.1□□□□□ -0.15
SNHG1-221ENST00000544983 USP48Q86UV5 1035 aa14.1□□□□□ -0.15
SNHG1-221ENST00000544983 TGFBRAP1Q8WUH2 860 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms