RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 OTUD7BQ6GQQ9 843 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 TBC1D22AQ8WUA7 517 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 KIF1BPQ96EK5 621 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 CRBNQ96SW2 442 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 GDF15Q99988 308 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 CD209Q9NNX6 404 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 GPR108Q9NPR9 543 aa11.66□□□□□ -0.54
CIT-216ENST00000544872 NOP58Q9Y2X3 529 aaKnown RBP11.66□□□□□ -0.54
CIT-216ENST00000544872 PSMD14O00487 310 aa11.65□□□□□ -0.54
CIT-216ENST00000544872 SEMA3EO15041 775 aa11.65□□□□□ -0.54
CIT-216ENST00000544872 IFIT2P09913 472 aaKnown RBP11.65□□□□□ -0.54
CIT-216ENST00000544872 SPRYD7Q5W111 196 aa11.65□□□□□ -0.54
CIT-216ENST00000544872 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.54
CIT-216ENST00000544872 ZGPATQ8N5A5 531 aaKnown RBP11.65□□□□□ -0.54
CIT-216ENST00000544872 AGBL3Q8NEM8 1001 aa11.65□□□□□ -0.54
CIT-216ENST00000544872 GPATCH3Q96I76 525 aa11.65□□□□□ -0.54
CIT-216ENST00000544872 ARIH1Q9Y4X5 557 aaPredicted RBP11.65□□□□□ -0.54
CIT-216ENST00000544872 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 APBB1O00213 710 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 VIL1P09327 827 aaKnown RBP11.64□□□□□ -0.55
CIT-216ENST00000544872 UQCRFS1P1P0C7P4 283 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 IL1R1P14778 569 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 GYG1P46976 350 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 GTF2IP78347 998 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 PRKG1Q13976 671 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 MTFR1Q15390 333 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 PRAMEF18Q5VWM3 479 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 RSBN1LQ6PCB5 846 aaPredicted RBP11.64□□□□□ -0.55
CIT-216ENST00000544872 WDR66Q8TBY9 1149 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 LRRCC1Q9C099 1032 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 UBE2OQ9C0C9 1292 aaKnown RBP11.64□□□□□ -0.55
CIT-216ENST00000544872 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 DENND2AQ9ULE3 1009 aa11.64□□□□□ -0.55
CIT-216ENST00000544872 ZMYND8Q9ULU4 1186 aaPredicted RBP11.64□□□□□ -0.55
CIT-216ENST00000544872 YDJCA8MPS7 323 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 IGF2BP3O00425 579 aaKnown RBP eCLIP11.63□□□□□ -0.55
CIT-216ENST00000544872 USP17L8P0C7I0 530 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 TIMM10P62072 90 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 CAP1Q01518 475 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 TTC39AQ5SRH9 613 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 ZNF697Q5TEC3 545 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 SPTY2D1Q68D10 685 aaPredicted RBP11.63□□□□□ -0.55
CIT-216ENST00000544872 ARMC9Q7Z3E5 817 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 FBXO33Q7Z6M2 555 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 FAM84BQ96KN1 310 aaPredicted RBP11.63□□□□□ -0.55
CIT-216ENST00000544872 P2RX7Q99572 595 aaKnown RBP11.63□□□□□ -0.55
CIT-216ENST00000544872 C1QTNF1Q9BXJ1 281 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 SCAF8Q9UPN6 1271 aaKnown RBP11.63□□□□□ -0.55
CIT-216ENST00000544872 EXOC6BQ9Y2D4 811 aa11.63□□□□□ -0.55
CIT-216ENST00000544872 MYO1BO43795 1136 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 FGFR2P21802 821 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 GJA8P48165 433 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 FKBP1AP62942 108 aaKnown RBP11.62□□□□□ -0.55
CIT-216ENST00000544872 CHAF1AQ13111 956 aaPredicted RBP11.62□□□□□ -0.55
CIT-216ENST00000544872 SCARF1Q14162 830 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 FAM109BQ6ICB4 259 aaPredicted RBP11.62□□□□□ -0.55
CIT-216ENST00000544872 UBE2Q1Q7Z7E8 422 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 VGLL2Q8N8G2 317 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 RHPN1Q8TCX5 695 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 XAGE2Q96GT9 111 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
CIT-216ENST00000544872 SUGT1Q9Y2Z0 365 aa11.62□□□□□ -0.55
CIT-216ENST00000544872 MAST3O60307 1309 aa11.61□□□□□ -0.55
CIT-216ENST00000544872 SNAP23O00161 211 aa11.61□□□□□ -0.55
CIT-216ENST00000544872 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
CIT-216ENST00000544872 TNNI3KQ59H18 835 aa11.61□□□□□ -0.55
CIT-216ENST00000544872 AACSQ86V21 672 aa11.61□□□□□ -0.55
CIT-216ENST00000544872 TXNRD3Q86VQ6 643 aa11.61□□□□□ -0.55
CIT-216ENST00000544872 C7orf61Q8IZ16 206 aa11.61□□□□□ -0.55
CIT-216ENST00000544872 TDRD7Q8NHU6 1098 aaKnown RBP11.61□□□□□ -0.55
CIT-216ENST00000544872 RNF208Q9H0X6 261 aa11.61□□□□□ -0.55
CIT-216ENST00000544872 BIN2Q9UBW5 565 aaPredicted RBP11.61□□□□□ -0.55
CIT-216ENST00000544872 FPGT-TNNI3KV9GXZ4 949 aa11.61□□□□□ -0.55
CIT-216ENST00000544872 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 GJB1P08034 283 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 KLRK1P26718 216 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 KIF22Q14807 665 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 MFSD14BQ5SR56 506 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 EXOC6Q8TAG9 804 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 SLC10A4Q96EP9 437 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 DCTPP1Q9H773 170 aa11.6□□□□□ -0.55
CIT-216ENST00000544872 DDX60Q8IY21 1712 aaKnown RBP11.6□□□□□ -0.55
CIT-216ENST00000544872 MUC3AQ02505 3323 aa11.59□□□□□ -0.55
CIT-216ENST00000544872 IGSF3O75054 1194 aa11.59□□□□□ -0.55
CIT-216ENST00000544872 LDHBP07195 334 aaKnown RBP11.59□□□□□ -0.55
CIT-216ENST00000544872 SYN1P17600 705 aa11.59□□□□□ -0.55
CIT-216ENST00000544872 MAGEA10P43363 369 aaPredicted RBP11.59□□□□□ -0.55
CIT-216ENST00000544872 HDAC1Q13547 482 aaPredicted RBP11.59□□□□□ -0.55
CIT-216ENST00000544872 DLGAP5Q15398 846 aa11.59□□□□□ -0.55
CIT-216ENST00000544872 DACT2Q5SW24 774 aa11.59□□□□□ -0.55
CIT-216ENST00000544872 NOL10Q9BSC4 688 aaKnown RBP11.59□□□□□ -0.55
CIT-216ENST00000544872 IQSEC3Q9UPP2 1182 aaPredicted RBP11.59□□□□□ -0.55
CIT-216ENST00000544872 FAM205AQ6ZU69 1335 aa11.59□□□□□ -0.55
CIT-216ENST00000544872 MUC6Q6W4X9 2439 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 CCL5P13501 91 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 FOSL2P15408 326 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 GSTO1P78417 241 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms