RNA–Protein interactions for RNA: ENST00000544643.5

CCDC189-209, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-209ENST00000544643 STAG1Q8WVM7 1258 aa23.58■■□□□ 1.37
CCDC189-209ENST00000544643 ZSCAN16Q9H4T2 348 aaPredicted RBP23.58■■□□□ 1.37
CCDC189-209ENST00000544643 ANKIB1Q9P2G1 1089 aa23.58■■□□□ 1.37
CCDC189-209ENST00000544643 GOLGA8BA8MQT2 603 aa23.57■■□□□ 1.36
CCDC189-209ENST00000544643 POLRMTO00411 1230 aaKnown RBP23.57■■□□□ 1.36
CCDC189-209ENST00000544643 FIBPO43427 364 aa23.57■■□□□ 1.36
CCDC189-209ENST00000544643 DDR1Q08345 913 aa23.57■■□□□ 1.36
CCDC189-209ENST00000544643 FERMT3Q86UX7 667 aa23.57■■□□□ 1.36
CCDC189-209ENST00000544643 CHD4Q14839 1912 aa23.57■■□□□ 1.36
CCDC189-209ENST00000544643 MFSD6Q6ZSS7 791 aa23.57■■□□□ 1.36
CCDC189-209ENST00000544643 NSUN4Q96CB9 384 aaKnown RBP23.57■■□□□ 1.36
CCDC189-209ENST00000544643 HOXA10P31260 410 aaPredicted RBP23.56■■□□□ 1.36
CCDC189-209ENST00000544643 CTDSPL2Q05D32 466 aa23.56■■□□□ 1.36
CCDC189-209ENST00000544643 RESTQ13127 1097 aa23.56■■□□□ 1.36
CCDC189-209ENST00000544643 TXNRD3Q86VQ6 643 aa23.56■■□□□ 1.36
CCDC189-209ENST00000544643 IGDCC4Q8TDY8 1250 aa23.56■■□□□ 1.36
CCDC189-209ENST00000544643 ZNF384Q8TF68 577 aa23.56■■□□□ 1.36
CCDC189-209ENST00000544643 MTA3Q9BTC8 594 aa23.56■■□□□ 1.36
CCDC189-209ENST00000544643 RNF41Q9H4P4 317 aaPredicted RBP23.56■■□□□ 1.36
CCDC189-209ENST00000544643 ANAPC4Q9UJX5 808 aa23.56■■□□□ 1.36
CCDC189-209ENST00000544643 ELP1O95163 1332 aa23.56■■□□□ 1.36
CCDC189-209ENST00000544643 KLRG2A4D1S0 409 aaPredicted RBP23.55■■□□□ 1.36
CCDC189-209ENST00000544643 BBOX1O75936 387 aa23.55■■□□□ 1.36
CCDC189-209ENST00000544643 SPTY2D1Q68D10 685 aaPredicted RBP23.55■■□□□ 1.36
CCDC189-209ENST00000544643 GIMAP6Q6P9H5 292 aa23.55■■□□□ 1.36
CCDC189-209ENST00000544643 BRIP1Q9BX63 1249 aa23.55■■□□□ 1.36
CCDC189-209ENST00000544643 MECOMQ03112 1051 aa23.55■■□□□ 1.36
CCDC189-209ENST00000544643 SGMS1Q86VZ5 419 aa23.55■■□□□ 1.36
CCDC189-209ENST00000544643 NKX2-3Q8TAU0 364 aa23.55■■□□□ 1.36
CCDC189-209ENST00000544643 AKT1S1Q96B36 256 aa23.55■■□□□ 1.36
CCDC189-209ENST00000544643 SCAND2PQ9GZW5 306 aaPredicted RBP23.55■■□□□ 1.36
CCDC189-209ENST00000544643 MAST2Q6P0Q8 1798 aa23.54■■□□□ 1.36
CCDC189-209ENST00000544643 LIFRP42702 1097 aa23.54■■□□□ 1.36
CCDC189-209ENST00000544643 PPARAQ07869 468 aa23.54■■□□□ 1.36
CCDC189-209ENST00000544643 CRAMP1Q96RY5 1269 aa23.54■■□□□ 1.36
CCDC189-209ENST00000544643 ZSWIM5Q9P217 1185 aa23.54■■□□□ 1.36
CCDC189-209ENST00000544643 TACC3Q9Y6A5 838 aa23.54■■□□□ 1.36
CCDC189-209ENST00000544643 APBA3O96018 575 aa23.53■■□□□ 1.36
CCDC189-209ENST00000544643 ATP2B4P23634 1241 aa23.53■■□□□ 1.36
CCDC189-209ENST00000544643 CHAF1AQ13111 956 aaPredicted RBP23.53■■□□□ 1.36
CCDC189-209ENST00000544643 RGS22Q8NE09 1264 aa23.53■■□□□ 1.36
CCDC189-209ENST00000544643 TDRD7Q8NHU6 1098 aaKnown RBP23.53■■□□□ 1.36
CCDC189-209ENST00000544643 KDM4AO75164 1064 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 FDPSP14324 419 aaKnown RBP23.52■■□□□ 1.36
CCDC189-209ENST00000544643 ZNF804AQ7Z570 1209 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 NLGN1Q8N2Q7 840 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 WDR66Q8TBY9 1149 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 SDR42E1Q8WUS8 393 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 LY9Q9HBG7 655 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 INCENPQ9NQS7 918 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 DYNLL1P63167 89 aaKnown RBP23.52■■□□□ 1.36
CCDC189-209ENST00000544643 GPSM2P81274 684 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 ZNF827Q17R98 1081 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 TMEM67Q5HYA8 995 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 LRSAM1Q6UWE0 723 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 FLAD1Q8NFF5 587 aa23.52■■□□□ 1.36
CCDC189-209ENST00000544643 CPLX1O14810 134 aa23.51■■□□□ 1.35
CCDC189-209ENST00000544643 APOA5Q6Q788 366 aa23.51■■□□□ 1.35
CCDC189-209ENST00000544643 TMC4Q7Z404 712 aa23.51■■□□□ 1.35
CCDC189-209ENST00000544643 CCDC88AQ3V6T2 1871 aa23.5■■□□□ 1.35
CCDC189-209ENST00000544643 RXRBP28702 533 aa23.5■■□□□ 1.35
CCDC189-209ENST00000544643 FAM173BQ6P4H8 233 aa23.5■■□□□ 1.35
CCDC189-209ENST00000544643 TTC6Q86TZ1 520 aa23.5■■□□□ 1.35
CCDC189-209ENST00000544643 KIAA1551Q9HCM1 1747 aa23.5■■□□□ 1.35
CCDC189-209ENST00000544643 IFIT3O14879 490 aaKnown RBP23.5■■□□□ 1.35
CCDC189-209ENST00000544643 PCP11498 1178 aaKnown RBP23.5■■□□□ 1.35
CCDC189-209ENST00000544643 PRDX5P30044 214 aa23.5■■□□□ 1.35
CCDC189-209ENST00000544643 METAP2P50579 478 aaKnown RBP eCLIP23.5■■□□□ 1.35
CCDC189-209ENST00000544643 SART3Q15020 963 aaKnown RBP23.5■■□□□ 1.35
CCDC189-209ENST00000544643 KLHL34Q8N239 644 aa23.5■■□□□ 1.35
CCDC189-209ENST00000544643 PODXL2Q9NZ53 605 aa23.5■■□□□ 1.35
CCDC189-209ENST00000544643 SYCE3A1L190 88 aa23.49■■□□□ 1.35
CCDC189-209ENST00000544643 CDKL5O76039 1030 aa23.49■■□□□ 1.35
CCDC189-209ENST00000544643 CCDC183Q5T5S1 534 aa23.49■■□□□ 1.35
CCDC189-209ENST00000544643 ATL3Q6DD88 541 aa23.49■■□□□ 1.35
CCDC189-209ENST00000544643 NFXL1Q6ZNB6 911 aa23.49■■□□□ 1.35
CCDC189-209ENST00000544643 COL23A1Q86Y22 540 aaPredicted RBP23.49■■□□□ 1.35
CCDC189-209ENST00000544643 CRNKL1Q9BZJ0 848 aaKnown RBP23.49■■□□□ 1.35
CCDC189-209ENST00000544643 ORC3Q9UBD5 711 aaPredicted RBP23.49■■□□□ 1.35
CCDC189-209ENST00000544643 GGA1Q9UJY5 639 aa23.49■■□□□ 1.35
CCDC189-209ENST00000544643 CFAP45Q9UL16 551 aa23.49■■□□□ 1.35
CCDC189-209ENST00000544643 ZBTB43O43298 467 aa23.48■■□□□ 1.35
CCDC189-209ENST00000544643 LETM1O95202 739 aaPredicted RBP23.48■■□□□ 1.35
CCDC189-209ENST00000544643 CPLX2Q6PUV4 134 aaKnown RBP23.48■■□□□ 1.35
CCDC189-209ENST00000544643 TMTC2Q8N394 836 aa23.48■■□□□ 1.35
CCDC189-209ENST00000544643 NID2Q14112 1375 aa23.48■■□□□ 1.35
CCDC189-209ENST00000544643 NRXN2Q9P2S2 1712 aa23.48■■□□□ 1.35
CCDC189-209ENST00000544643 MINDY4BA8MYZ0 360 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 UFL1O94874 794 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 SLC51AQ86UW1 340 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 DZIP1Q86YF9 867 aaKnown RBP23.47■■□□□ 1.35
CCDC189-209ENST00000544643 LEO1Q8WVC0 666 aaPredicted RBP23.47■■□□□ 1.35
CCDC189-209ENST00000544643 SPATA32Q96LK8 384 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 PANK2Q9BZ23 570 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 SENP2Q9HC62 589 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 ATP8A2Q9NTI2 1148 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 RRP12Q5JTH9 1297 aaKnown RBP23.47■■□□□ 1.35
CCDC189-209ENST00000544643 ESR2Q92731 530 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 TOMM22Q9NS69 142 aa23.47■■□□□ 1.35
CCDC189-209ENST00000544643 TFIP11Q9UBB9 837 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms