RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	SAMM50	Q9Y512	469 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	ECEL1	O95672	775 aa		7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	CTSB	P07858	339 aa		7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	GSTP1	P09211	210 aa	Known RBP	7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	MAOB	P27338	520 aa		7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	RPS26	P62854	115 aa	Known RBP	7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	ZNF252P-AS1	Q0IIN9	211 aa		7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	PHC3	Q8NDX5	983 aa		7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	CORO1B	Q9BR76	489 aa		7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	EMILIN2	Q9BXX0	1053 aa		7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	COPRS	Q9NQ92	184 aa		7.02	□□□□□ -1.29
RAP1B-231	ENST00000544639	PWP1	Q13610	501 aa		7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	LRP8	Q14114	963 aa		7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	DUOXA2	Q1HG44	320 aa		7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	AGMO	Q6ZNB7	445 aa		7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	KIAA1211	Q6ZU35	1233 aa		7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	GRIN3A	Q8TCU5	1115 aa		7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	WFDC12	Q8WWY7	111 aa		7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	MRPL18	Q9H0U6	180 aa	Known RBP	7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639	KBTBD4	Q9NVX7	518 aa		7.01	□□□□□ -1.29
RAP1B-231	ENST00000544639		F6X3S4	739 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	DLGAP3	O95886	979 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	LRRC14	Q15048	493 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	C9orf131	Q5VYM1	1079 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	LLGL2	Q6P1M3	1020 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	ACAD11	Q709F0	780 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	TMEM74	Q96NL1	305 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	CCDC86	Q9H6F5	360 aa	Known RBP	7	□□□□□ -1.29
RAP1B-231	ENST00000544639	CBX8	Q9HC52	389 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	KRT82	Q9NSB4	513 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	CYP8B1	Q9UNU6	501 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	TLR6	Q9Y2C9	796 aa		7	□□□□□ -1.29
RAP1B-231	ENST00000544639	TFE3	P19532	575 aa	Predicted RBP	6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	GBP2	P32456	591 aa	Predicted RBP	6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	NT5DC4	Q86YG4	428 aa		6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	RELL1	Q8IUW5	271 aa		6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	KCNB2	Q92953	911 aa		6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	GAL3ST3	Q96A11	431 aa		6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	RHOV	Q96L33	236 aa		6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	RUSC1	Q9BVN2	902 aa		6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	ZC3H12C	Q9C0D7	883 aa	Known RBP	6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639	CACNA2D2	Q9NY47	1150 aa		6.99	□□□□□ -1.29
RAP1B-231	ENST00000544639		F8W735	103 aa	Predicted RBP	6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	TRIM37	O94972	964 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	NOS3	P29474	1203 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	IREB2	P48200	963 aa	Known RBP	6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	RAD51AP2	Q09MP3	1159 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	PDE3A	Q14432	1141 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	ZNF394	Q53GI3	561 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	MAP1S	Q66K74	1059 aa	Predicted RBP	6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	SCARA3	Q6AZY7	606 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	NBPF11	Q86T75	865 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	USP48	Q86UV5	1035 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	TMEM130	Q8N3G9	435 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	TMPRSS13	Q9BYE2	586 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	PCDHGB7	Q9Y5F8	929 aa		6.98	□□□□□ -1.29
RAP1B-231	ENST00000544639	MEGF11	A6BM72	1044 aa		6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	LMNB2	Q03252	620 aa		6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	EXOSC6	Q5RKV6	272 aa	Known RBP	6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	MPRIP	Q6WCQ1	1025 aa		6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	SLC51A	Q86UW1	340 aa		6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	AGGF1	Q8N302	714 aa	eCLIP	6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	GPBAR1	Q8TDU6	330 aa		6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	RNF208	Q9H0X6	261 aa		6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	DDX41	Q9UJV9	622 aa	Known RBP	6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	PCDHB5	Q9Y5E4	795 aa		6.97	□□□□□ -1.29
RAP1B-231	ENST00000544639	MINDY4B	A8MYZ0	360 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	ZNF862	O60290	1169 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	PF4	P02776	101 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	GART	P22102	1010 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	ERCC5	P28715	1186 aa	Predicted RBP	6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	RACK1	P63244	317 aa	Known RBP	6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	CAMK2G	Q13555	558 aa	Predicted RBP	6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	SEPT6	Q14141	434 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	KIF4B	Q2VIQ3	1234 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639		Q6ZS46	218 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	TRIM42	Q8IWZ5	723 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	DZIP1L	Q8IYY4	767 aa	Known RBP	6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	WDR18	Q9BV38	432 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	TGIF2	Q9GZN2	237 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	MIR1-1HG	Q9H1L0	117 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	AKTIP	Q9H8T0	292 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	SUGCT	Q9HAC7	445 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	KCNQ5	Q9NR82	932 aa		6.96	□□□□□ -1.3
RAP1B-231	ENST00000544639	HYAL3	O43820	417 aa	Predicted RBP	6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	AOC2	O75106	756 aa		6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	ALX3	O95076	343 aa		6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	LIG1	P18858	919 aa		6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	LMNB1	P20700	586 aa		6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	HNRNPU	Q00839	825 aa	Known RBP eCLIP	6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	PTPN11	Q06124	597 aa	Predicted RBP	6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	CCDC84	Q86UT8	332 aa	Predicted RBP	6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	WDR89	Q96FK6	387 aa	Predicted RBP	6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	MEGF10	Q96KG7	1140 aa		6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	KRTAP9-2	Q9BYQ4	174 aa		6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	ADAMTS1	Q9UHI8	967 aa		6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	RNF112	Q9ULX5	631 aa		6.95	□□□□□ -1.3
RAP1B-231	ENST00000544639	PCDHGC5	Q9Y5F6	944 aa		6.95	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms