RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 NAA16Q6N069 864 aaPredicted RBP16.67■□□□□ 0.26
LTBR-213ENST00000544454 SAPCD2Q86UD0 394 aa16.67■□□□□ 0.26
LTBR-213ENST00000544454 GBA2Q9HCG7 927 aaPredicted RBP16.67■□□□□ 0.26
LTBR-213ENST00000544454 NDUFB9Q9Y6M9 179 aa16.67■□□□□ 0.26
LTBR-213ENST00000544454 RASSF10A6NK89 507 aa16.66■□□□□ 0.26
LTBR-213ENST00000544454 GOLIM4O00461 696 aa16.66■□□□□ 0.26
LTBR-213ENST00000544454 BTDP43251 543 aa16.66■□□□□ 0.26
LTBR-213ENST00000544454 DEFB115Q30KQ5 88 aa16.66■□□□□ 0.26
LTBR-213ENST00000544454 HHIPL1Q96JK4 782 aa16.66■□□□□ 0.26
LTBR-213ENST00000544454 DNAJC2Q99543 621 aaKnown RBP16.66■□□□□ 0.26
LTBR-213ENST00000544454 MYH13Q9UKX3 1938 aa16.66■□□□□ 0.26
LTBR-213ENST00000544454 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
LTBR-213ENST00000544454 BAG3O95817 575 aa16.65■□□□□ 0.26
LTBR-213ENST00000544454 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
LTBR-213ENST00000544454 CACNB3P54284 484 aa16.65■□□□□ 0.26
LTBR-213ENST00000544454 PPP4CP60510 307 aa16.65■□□□□ 0.26
LTBR-213ENST00000544454 IDI2Q9BXS1 227 aa16.65■□□□□ 0.26
LTBR-213ENST00000544454 PAG1Q9NWQ8 432 aa16.65■□□□□ 0.26
LTBR-213ENST00000544454 ERC2O15083 957 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 RHBDL3P58872 404 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 NUCB1Q02818 461 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 NBPF12Q5TAG4 269 aaPredicted RBP16.64■□□□□ 0.25
LTBR-213ENST00000544454 FAM151AQ8WW52 585 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 KLRG1Q96E93 195 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 TEPSINQ96N21 525 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 NOL10Q9BSC4 688 aaKnown RBP16.64■□□□□ 0.25
LTBR-213ENST00000544454 TMEM39BQ9GZU3 492 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 AKAP11Q9UKA4 1901 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 POLR2AP24928 1970 aaKnown RBP16.64■□□□□ 0.25
LTBR-213ENST00000544454 CNTNAP1P78357 1384 aa16.64■□□□□ 0.25
LTBR-213ENST00000544454 PPP1R12BO60237 982 aaPredicted RBP16.63■□□□□ 0.25
LTBR-213ENST00000544454 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
LTBR-213ENST00000544454 GLRX3O76003 335 aaKnown RBP16.63■□□□□ 0.25
LTBR-213ENST00000544454 PLCG2P16885 1265 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 MX1P20591 662 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 CYP7A1P22680 504 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 HUNKP57058 714 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 NFIAQ12857 509 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 CERS3Q8IU89 383 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 MAGEB6Q8N7X4 407 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
LTBR-213ENST00000544454 FAM198AQ9UFP1 575 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 STAP2Q9UGK3 403 aa16.63■□□□□ 0.25
LTBR-213ENST00000544454 MKRN1Q9UHC7 482 aaKnown RBP16.63■□□□□ 0.25
LTBR-213ENST00000544454 ENTPD3O75355 529 aa16.62■□□□□ 0.25
LTBR-213ENST00000544454 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
LTBR-213ENST00000544454 SLC9C2Q5TAH2 1124 aa16.62■□□□□ 0.25
LTBR-213ENST00000544454 ARMC9Q7Z3E5 817 aa16.62■□□□□ 0.25
LTBR-213ENST00000544454 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
LTBR-213ENST00000544454 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
LTBR-213ENST00000544454 LNPKQ9C0E8 428 aa16.62■□□□□ 0.25
LTBR-213ENST00000544454 SALL3Q9BXA9 1300 aa16.62■□□□□ 0.25
LTBR-213ENST00000544454 UNCXA6NJT0 531 aa16.61■□□□□ 0.25
LTBR-213ENST00000544454 PDE6AP16499 860 aa16.61■□□□□ 0.25
LTBR-213ENST00000544454 ECE1P42892 770 aa16.61■□□□□ 0.25
LTBR-213ENST00000544454 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
LTBR-213ENST00000544454 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
LTBR-213ENST00000544454 ADGRA1Q86SQ6 560 aa16.61■□□□□ 0.25
LTBR-213ENST00000544454 PI4K2BQ8TCG2 481 aa16.61■□□□□ 0.25
LTBR-213ENST00000544454 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.251e-6■■■□□ 15.4
LTBR-213ENST00000544454 AATFQ9NY61 560 aaKnown RBP eCLIP16.61■□□□□ 0.25
LTBR-213ENST00000544454 UBE2Q2LH0YL09 131 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 VEGFBP49765 207 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 RGS3P49796 1198 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 PDE1AP54750 535 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 TCP10Q12799 353 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 ZSCAN25Q6NSZ9 544 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 RGMBQ6NW40 437 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 MOB2Q70IA6 237 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 TEX11Q8IYF3 940 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 TRPM7Q96QT4 1865 aa16.6■□□□□ 0.25
LTBR-213ENST00000544454 TCRBV5S4A2TA0A5A2 114 aa16.59■□□□□ 0.25
LTBR-213ENST00000544454 USP2O75604 605 aaPredicted RBP16.59■□□□□ 0.25
LTBR-213ENST00000544454 PRKG1Q13976 671 aa16.59■□□□□ 0.25
LTBR-213ENST00000544454 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
LTBR-213ENST00000544454 ZFPM1Q8IX07 1006 aa16.59■□□□□ 0.25
LTBR-213ENST00000544454 KBTBD3Q8NAB2 608 aa16.59■□□□□ 0.25
LTBR-213ENST00000544454 SH3RF3Q8TEJ3 882 aaPredicted RBP16.59■□□□□ 0.25
LTBR-213ENST00000544454 CCDC102AQ96A19 550 aa16.59■□□□□ 0.25
LTBR-213ENST00000544454 ANGEL1Q9UNK9 670 aaKnown RBP16.59■□□□□ 0.25
LTBR-213ENST00000544454 RFX7Q2KHR2 1363 aa16.59■□□□□ 0.25
LTBR-213ENST00000544454 RPAP1Q9BWH6 1393 aaPredicted RBP16.59■□□□□ 0.25
LTBR-213ENST00000544454 ECM29Q5VYK3 1845 aa16.59■□□□□ 0.25
LTBR-213ENST00000544454 ADD2P35612 726 aa16.58■□□□□ 0.24
LTBR-213ENST00000544454 IREB2P48200 963 aaKnown RBP16.58■□□□□ 0.24
LTBR-213ENST00000544454 ZNF157P51786 506 aaPredicted RBP16.58■□□□□ 0.24
LTBR-213ENST00000544454 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
LTBR-213ENST00000544454 CYP4F22Q6NT55 531 aa16.58■□□□□ 0.24
LTBR-213ENST00000544454 PAXIP1Q6ZW49 1069 aaPredicted RBP16.58■□□□□ 0.24
LTBR-213ENST00000544454 JMYQ8N9B5 988 aa16.58■□□□□ 0.24
LTBR-213ENST00000544454 MIGA1Q8NAN2 632 aa16.58■□□□□ 0.24
LTBR-213ENST00000544454 CAPNS2Q96L46 248 aa16.58■□□□□ 0.24
LTBR-213ENST00000544454 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
LTBR-213ENST00000544454 WDR33Q9C0J8 1336 aaKnown RBP16.58■□□□□ 0.24
LTBR-213ENST00000544454 ZNF532Q9HCE3 1301 aa16.58■□□□□ 0.24
LTBR-213ENST00000544454 PCNTO95613 3336 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms