RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SRRTQ9BXP5 876 aaKnown RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 ST7Q9NRC1 585 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 AMOTL2Q9Y2J4 779 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 MAGED1Q9Y5V3 778 aaPredicted RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 MORC2Q9Y6X9 1032 aaPredicted RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 AK9Q5TCS8 1911 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 PECAM1P16284 738 aaPredicted RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 MAGEA9P43362 315 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 CLK1P49759 484 aaKnown RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 CCDC152Q4G0S7 254 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 CCDC174Q6PII3 467 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 FAM47EQ6ZV65 393 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 NT5DC4Q86YG4 428 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 VPS52Q8N1B4 723 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 NLRP7Q8WX94 980 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 CLIP2Q9UDT6 1046 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 ATP8A1Q9Y2Q0 1164 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 TRIM37O94972 964 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 OAS2P29728 719 aaKnown RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 ZBTB17Q13105 803 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 NEDD9Q14511 834 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 SEPT7Q16181 437 aaKnown RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 RABL6Q3YEC7 729 aaPredicted RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 RAVER1Q8IY67 606 aaKnown RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 SYCP3Q8IZU3 236 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 CCDC89Q8N998 374 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 TBC1D5Q92609 795 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 EPSTI1Q96J88 318 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 AGAP3Q96P47 875 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 TANGO6Q9C0B7 1094 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 ZMAT5Q9UDW3 170 aaKnown RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 MAFFQ9ULX9 164 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 NUP155O75694 1391 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 CEP152O94986 1710 aa10.12□□□□□ -0.79
VPS13D-212ENST00000543766 SETD1BQ9UPS6 1966 aaKnown RBP10.12□□□□□ -0.79
VPS13D-212ENST00000543766 KATNA1O75449 491 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 CATIPQ7Z7H3 387 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 CCDC39Q9UFE4 941 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 WTAPQ15007 396 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 C10orf76Q5T2E6 689 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 UNC5DQ6UXZ4 953 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 OTUD6AQ7L8S5 288 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 RASGRP2Q7LDG7 609 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 KIAA1328Q86T90 577 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 PIBF1Q8WXW3 757 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 PPP1R14BQ96C90 147 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 SLX1AQ9BQ83 275 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 HPS4Q9NQG7 708 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 F8W031 263 aaPredicted RBP10.11□□□□□ -0.79
VPS13D-212ENST00000543766 REC8O95072 547 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 ENPP1P22413 925 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 TMEM62Q0P6H9 643 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 CCDC121Q6ZUS5 278 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
VPS13D-212ENST00000543766 NELL1Q92832 810 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 GTF3C6Q969F1 213 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 MMTAG2Q9BU76 263 aaKnown RBP10.11□□□□□ -0.79
VPS13D-212ENST00000543766 SPTLC3Q9NUV7 552 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 ADAMTS8Q9UP79 889 aa10.11□□□□□ -0.79
VPS13D-212ENST00000543766 TET3O43151 1660 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 ARPC4-TTLL3A0A0A6YYG9 625 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 EIF4BP23588 611 aaKnown RBP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 CYP2C19P33261 490 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 SMUG1Q53HV7 270 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 ANKRD13BQ86YJ7 626 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 SAAL1Q96ER3 474 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 SPC25Q9HBM1 224 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 DAAM1Q9Y4D1 1078 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 GPRASP1Q5JY77 1395 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 KDM5AP29375 1690 aaKnown RBP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 HECW2Q9P2P5 1572 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 CTIFO43310 598 aaKnown RBP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 RBM6P78332 1123 aaKnown RBP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 PTPN14Q15678 1187 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 ZSCAN23Q3MJ62 389 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 TCP11Q8WWU5 503 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 CEP63Q96MT8 703 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 KIDINS220Q9ULH0 1771 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 RASA4O43374 803 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 BCAR3O75815 825 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 CYP2E1P05181 493 aaPredicted RBP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 Q4G0T1 1027 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 ANKRD45Q5TZF3 282 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 CAPRIN2Q6IMN6 1127 aaKnown RBP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 CWC27Q6UX04 472 aaKnown RBP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 SNRNP27Q8WVK2 155 aaKnown RBP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.1□□□□□ -0.79
VPS13D-212ENST00000543766 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 JADE2Q9NQC1 790 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 KCTD5Q9NXV2 234 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 TRAK1Q9UPV9 953 aa10.1□□□□□ -0.79
VPS13D-212ENST00000543766 PLA2R1Q13018 1463 aa10.09□□□□□ -0.79
VPS13D-212ENST00000543766 hCG_1984214I3L0E3 225 aa10.09□□□□□ -0.79
VPS13D-212ENST00000543766 HSD17B7P56937 341 aa10.09□□□□□ -0.79
VPS13D-212ENST00000543766 ATP2B2Q01814 1243 aa10.09□□□□□ -0.79
VPS13D-212ENST00000543766 LBRQ14739 615 aaKnown RBP10.09□□□□□ -0.79
VPS13D-212ENST00000543766 PACS1Q6VY07 963 aa10.09□□□□□ -0.79
VPS13D-212ENST00000543766 LIMCH1Q9UPQ0 1083 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms