RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 USP17L3A6NCW0 530 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 USP17L4A6NCW7 530 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 UFL1O94874 794 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 MYCP01106 439 aaPredicted RBP6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 GJA5P36382 358 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 PRSS12P56730 875 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 TSR1Q2NL82 804 aaKnown RBP6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 COPS6Q7L5N1 327 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 USP17L1Q7RTZ2 530 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 UBE2Q1Q7Z7E8 422 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 SH3TC2Q8TF17 1288 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 FAM89AQ96GI7 184 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 WNK4Q96J92 1243 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 MXD3Q9BW11 206 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 GZF1Q9H116 711 aaPredicted RBP6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 GOPCQ9HD26 462 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 MUC3AQ02505 3323 aa6.36□□□□□ -1.39
NPIPB4-219ENST00000543660 PSME4Q14997 1843 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 UNCXA6NJT0 531 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 ZBTB7BO15156 539 aaPredicted RBP6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 EIF2S2P20042 333 aaKnown RBP6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 AIMP1Q12904 312 aaKnown RBP6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 DACT2Q5SW24 774 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 OTUD7BQ6GQQ9 843 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 PODNQ7Z5L7 613 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 XAGE3Q8WTP9 111 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 ZNF516Q92618 1163 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 ZBED3Q96IU2 234 aaPredicted RBP6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 FAM117AQ9C073 453 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 ANKIB1Q9P2G1 1089 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 GGA1Q9UJY5 639 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 LAMB1P07942 1786 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 SSC5DA1L4H1 1573 aa6.35□□□□□ -1.39
NPIPB4-219ENST00000543660 SMAPO00193 183 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 SASH1O94885 1247 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 MTFR1Q15390 333 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 APOBEC3FQ8IUX4 373 aaKnown RBP6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 OGFOD1Q8N543 542 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 TATDN2Q93075 761 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 CLUAP1Q96AJ1 413 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 DEFB129Q9H1M3 183 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 SEC31BQ9NQW1 1179 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 NUDCQ9Y266 331 aa6.34□□□□□ -1.39
NPIPB4-219ENST00000543660 MMP14P50281 582 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 ARHGEF6Q15052 776 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 RTL5Q5HYW3 569 aaPredicted RBP6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 STRIP1Q5VSL9 837 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 FOXD4L5Q5VV16 416 aaPredicted RBP6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 RETREG2Q8NC44 543 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 FOXD4L4Q8WXT5 416 aaPredicted RBP6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 CFAP53Q96M91 514 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 ISCA1Q9BUE6 129 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 HTATIP2Q9BUP3 242 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 ARHGAP39Q9C0H5 1083 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 STXBP5LQ9Y2K9 1186 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 ARIH1Q9Y4X5 557 aaPredicted RBP6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 NR2E3Q9Y5X4 410 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 EYSQ5T1H1 3165 aa6.33□□□□□ -1.4
NPIPB4-219ENST00000543660 XDHP47989 1333 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 MYO3BQ8WXR4 1341 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 SPDYE16A6NNV3 312 aaPredicted RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 ATP5J2-PTCD1G3V325 749 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 IRS4O14654 1257 aaPredicted RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 PPP1R12BO60237 982 aaPredicted RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 USP2O75604 605 aaPredicted RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 ATP2B4P23634 1241 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 GJA8P48165 433 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 TRIM28Q13263 835 aaKnown RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 Q7L0L9 218 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 DEFB123Q8N688 67 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 NKX2-3Q8TAU0 364 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 BRI3BPQ8WY22 251 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 PCMTD1Q96MG8 357 aaPredicted RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 MTMR10Q9NXD2 777 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 STAP2Q9UGK3 403 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 PNMA3Q9UL41 463 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 LAMA2P24043 3122 aaKnown RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 PRUNE2Q8WUY3 3088 aa6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 COL1A1P02452 1464 aaPredicted RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 ZNF646O15015 1829 aaPredicted RBP6.32□□□□□ -1.4
NPIPB4-219ENST00000543660 GJB1P08034 283 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 IREB2P48200 963 aaKnown RBP6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 LACTBP83111 547 aaPredicted RBP6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 TAF1CQ15572 869 aaPredicted RBP6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 SUPT20HL1Q3ZLR7 823 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 NBPF12Q5TAG4 269 aaPredicted RBP6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 TXNRD3Q86VQ6 643 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 KIAA0825Q8IV33 1275 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 ANKRD13AQ8IZ07 590 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 FAM43AQ8N2R8 423 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 OPTNQ96CV9 577 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 PLEKHF1Q96S99 279 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 ZFYVE28Q9HCC9 887 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 FAM198AQ9UFP1 575 aa6.31□□□□□ -1.4
NPIPB4-219ENST00000543660 TSPYL4Q9UJ04 414 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms