RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 BRD3Q15059 726 aa14.39□□□□□ -0.11
SMCR5-201ENST00000543475 IMMTQ16891 758 aaKnown RBP14.39□□□□□ -0.11
SMCR5-201ENST00000543475 SPECC1LQ69YQ0 1117 aa14.39□□□□□ -0.11
SMCR5-201ENST00000543475 ZNF790Q6PG37 636 aa14.39□□□□□ -0.11
SMCR5-201ENST00000543475 KCNH5Q8NCM2 988 aa14.39□□□□□ -0.11
SMCR5-201ENST00000543475 CNNM3Q8NE01 707 aa14.39□□□□□ -0.11
SMCR5-201ENST00000543475 ANKRD24Q8TF21 1146 aa14.39□□□□□ -0.11
SMCR5-201ENST00000543475 DESI2Q9BSY9 194 aa14.39□□□□□ -0.11
SMCR5-201ENST00000543475 LCMT1Q9UIC8 334 aa14.39□□□□□ -0.11
SMCR5-201ENST00000543475 NFAT5O94916 1531 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 ATP5J2-PTCD1G3V325 749 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 TRIM66O15016 1216 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 PTCD1O75127 700 aaKnown RBP14.38□□□□□ -0.11
SMCR5-201ENST00000543475 IFIT1P09914 478 aaKnown RBP14.38□□□□□ -0.11
SMCR5-201ENST00000543475 CCDC102BQ68D86 513 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 LMBR1LQ6UX01 489 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 TC2NQ8N9U0 490 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 PCDHA5Q9Y5H7 936 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 PPP6R2O75170 966 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 CHMP4BP1P59074 171 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 LEKR1Q6ZMV7 388 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 METTL16Q86W50 562 aaKnown RBP14.38□□□□□ -0.11
SMCR5-201ENST00000543475 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
SMCR5-201ENST00000543475 ACTN2P35609 894 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 PIP4K2AP48426 406 aaPredicted RBP14.37□□□□□ -0.11
SMCR5-201ENST00000543475 MCM6Q14566 821 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 LONRF3Q496Y0 759 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 TICAM2Q86XR7 235 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 VPS37DQ86XT2 251 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 VPS18Q9P253 973 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 SIPA1L3O60292 1781 aaPredicted RBP14.37□□□□□ -0.11
SMCR5-201ENST00000543475 MAP2K7O14733 419 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 PDE4BQ07343 736 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 RESP18Q5W5W9 173 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 RALYLQ86SE5 291 aaKnown RBP14.37□□□□□ -0.11
SMCR5-201ENST00000543475 OSBP2Q969R2 916 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 CDC27P30260 824 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 WASHC4Q2M389 1173 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 SRLQ86TD4 932 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 FOXP4Q8IVH2 680 aaPredicted RBP14.37□□□□□ -0.11
SMCR5-201ENST00000543475 AIFM3Q96NN9 605 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 PDE11AQ9HCR9 933 aa14.37□□□□□ -0.11
SMCR5-201ENST00000543475 RRP15Q9Y3B9 282 aaKnown RBP14.37□□□□□ -0.11
SMCR5-201ENST00000543475 CCDC175P0C221 793 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 KCNA6P17658 529 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 SRGAP1Q7Z6B7 1085 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 NCOA7Q8NI08 942 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 IRX2Q9BZI1 471 aaPredicted RBP14.36□□□□□ -0.11
SMCR5-201ENST00000543475 PUF60Q9UHX1 559 aaKnown RBP14.36□□□□□ -0.11
SMCR5-201ENST00000543475 KCNH3Q9ULD8 1083 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 NFE2L3Q9Y4A8 694 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 C5P01031 1676 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 PTPAQ15257 358 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 HDXQ7Z353 690 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 MB21D2Q8IYB1 491 aaPredicted RBP14.36□□□□□ -0.11
SMCR5-201ENST00000543475 LZTFL1Q9NQ48 299 aa14.36□□□□□ -0.11
SMCR5-201ENST00000543475 HOOK1Q9UJC3 728 aaKnown RBP14.36□□□□□ -0.11
SMCR5-201ENST00000543475 BMP6P22004 513 aa14.35□□□□□ -0.11
SMCR5-201ENST00000543475 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMCR5-201ENST00000543475 ATG9AQ7Z3C6 839 aa14.35□□□□□ -0.11
SMCR5-201ENST00000543475 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
SMCR5-201ENST00000543475 MRPL44Q9H9J2 332 aaKnown RBP14.35□□□□□ -0.11
SMCR5-201ENST00000543475 FAM237AA0A1B0GTK4 181 aa14.35□□□□□ -0.11
SMCR5-201ENST00000543475 CUTAO60888 179 aa14.35□□□□□ -0.11
SMCR5-201ENST00000543475 EIF3JO75822 258 aaKnown RBP14.35□□□□□ -0.11
SMCR5-201ENST00000543475 FGAP02671 866 aa14.35□□□□□ -0.11
SMCR5-201ENST00000543475 KRT40Q6A162 431 aa14.35□□□□□ -0.11
SMCR5-201ENST00000543475 HNRNPLLQ8WVV9 542 aaKnown RBP14.35□□□□□ -0.11
SMCR5-201ENST00000543475 EFCC1Q9HA90 598 aa14.35□□□□□ -0.11
SMCR5-201ENST00000543475 POTEB2H3BUK9 544 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 ERLIN1O75477 346 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 IVLP07476 585 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 ANTXR2P58335 489 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 MTF1Q14872 753 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 BEND6Q5SZJ8 279 aaPredicted RBP14.34□□□□□ -0.11
SMCR5-201ENST00000543475 CEP112Q8N8E3 955 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 IQUBQ8NA54 791 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 ZBTB9Q96C00 473 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 FOXN1O15353 648 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 MAP3K14Q99558 947 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 RAI14Q9P0K7 980 aa14.34□□□□□ -0.11
SMCR5-201ENST00000543475 NWD2Q9ULI1 1742 aa14.33□□□□□ -0.11
SMCR5-201ENST00000543475 KIF5CO60282 957 aa14.33□□□□□ -0.11
SMCR5-201ENST00000543475 IL15P40933 162 aaPredicted RBP14.33□□□□□ -0.11
SMCR5-201ENST00000543475 CEBPAP49715 358 aaPredicted RBP14.33□□□□□ -0.11
SMCR5-201ENST00000543475 TRMT44Q8IYL2 757 aaKnown RBP14.33□□□□□ -0.11
SMCR5-201ENST00000543475 ZNF496Q96IT1 587 aaPredicted RBP14.33□□□□□ -0.11
SMCR5-201ENST00000543475 ANKZF1Q9H8Y5 726 aa14.33□□□□□ -0.11
SMCR5-201ENST00000543475 DACH1Q9UI36 760 aa14.33□□□□□ -0.11
SMCR5-201ENST00000543475 SOWAHDA6NJG2 315 aa14.33□□□□□ -0.12
SMCR5-201ENST00000543475 CDKL5O76039 1030 aa14.33□□□□□ -0.12
SMCR5-201ENST00000543475 ZNF18P17022 549 aa14.33□□□□□ -0.12
SMCR5-201ENST00000543475 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMCR5-201ENST00000543475 NUTM2AQ8IVF1 878 aaPredicted RBP14.33□□□□□ -0.12
SMCR5-201ENST00000543475 CDC23Q9UJX2 597 aa14.33□□□□□ -0.12
SMCR5-201ENST00000543475 MAN1B1Q9UKM7 699 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms