RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 SLC27A2O14975 620 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 GPR162Q16538 588 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 DEFB132Q7Z7B7 95 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 MAP4K1Q92918 833 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 ZNRF3Q9ULT6 936 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 CEP131Q9UPN4 1083 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 TOGARAM1Q9Y4F4 1720 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 ZBTB7AO95365 584 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 SSRP1Q08945 709 aaKnown RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 NOL8Q76FK4 1167 aaKnown RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 CCDC24Q8N4L8 307 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 CCDC148Q8NFR7 591 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 TDRD7Q8NHU6 1098 aaKnown RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 FAM84BQ96KN1 310 aaPredicted RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 MARCH6O60337 910 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 IARSP41252 1262 aaKnown RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 RCAN1P53805 252 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 HHIPL2Q6UWX4 724 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 AGBL3Q8NEM8 1001 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 N4BP2Q86UW6 1770 aaPredicted RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 IKQ13123 557 aaPredicted RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 IFIT1BQ5T764 474 aaKnown RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 CCDC47Q96A33 483 aaKnown RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 NAP1L4Q99733 375 aaKnown RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 ARHGEF10LQ9HCE6 1279 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 TJP1Q07157 1748 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 MPHOSPH10O00566 681 aaKnown RBP9.32□□□□□ -0.92
TRIM59-208ENST00000543469 ECE2O60344 883 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 BMP15O95972 392 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 RPS6KB1P23443 525 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 DDR1Q08345 913 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 AKNAD1Q5T1N1 836 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 AS3MTQ9HBK9 375 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 USP40Q9NVE5 1235 aa9.32□□□□□ -0.92
TRIM59-208ENST00000543469 ZBTB43O43298 467 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 PRC1O43663 620 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 MCAMP43121 646 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 BTDP43251 543 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 MPHOSPH6Q99547 160 aaKnown RBP9.31□□□□□ -0.92
TRIM59-208ENST00000543469 MRIQ9BWK5 157 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 ARMT1Q9H993 441 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 CFAP45Q9UL16 551 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 MROH7-TTC4A0A0A0MT08 1334 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 FAM205AQ6ZU69 1335 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 FOXP4Q8IVH2 680 aaPredicted RBP9.31□□□□□ -0.92
TRIM59-208ENST00000543469 IFNL3Q8IZI9 196 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 IL1R1P14778 569 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 METAP2P50579 478 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRIM59-208ENST00000543469 PPARAQ07869 468 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 APOBEC3FQ8IUX4 373 aaKnown RBP9.31□□□□□ -0.92
TRIM59-208ENST00000543469 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
TRIM59-208ENST00000543469 KLRG2A4D1S0 409 aaPredicted RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 MBD3O95983 291 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 TLR7Q9NYK1 1049 aaKnown RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 VIRMAQ69YN4 1812 aaKnown RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 C21orf2O43822 256 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 LETM1O95202 739 aaPredicted RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 HSPD1P10809 573 aaKnown RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 KIAA2012Q0VF49 1180 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 ATL3Q6DD88 541 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 USP48Q86UV5 1035 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 LSG1Q9H089 658 aaKnown RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 DPEP1P16444 411 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 TPM4P67936 248 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 SUPT20HL1Q3ZLR7 823 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 RBM26Q5T8P6 1007 aaKnown RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 MCTP1Q6DN14 999 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 FAM177A1Q8N128 213 aaPredicted RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 MIGA1Q8NAN2 632 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 NUP133Q8WUM0 1156 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 SPEF2Q9C093 1822 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 IQCA1LA6NCM1 817 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 GOLGA6L6A8MZA4 724 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 B4DLN1 442 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 MRPL12P52815 198 aaKnown RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 RTN1Q16799 776 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 BICD2Q8TD16 824 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 PYM1Q9BRP8 204 aaKnown RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 ALDH8A1Q9H2A2 487 aaPredicted RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 ZSCAN16Q9H4T2 348 aaPredicted RBP9.3□□□□□ -0.92
TRIM59-208ENST00000543469 GJA3Q9Y6H8 435 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 ANKRD36CQ5JPF3 1778 aa9.3□□□□□ -0.92
TRIM59-208ENST00000543469 SCN7AQ01118 1682 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 CALML3P27482 149 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 LARP1BQ659C4 914 aaKnown RBP9.29□□□□□ -0.92
TRIM59-208ENST00000543469 CUL5Q93034 780 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 FAM227BQ96M60 508 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 AATFQ9NY61 560 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM59-208ENST00000543469 SERPINA10Q9UK55 444 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 ANGEL1Q9UNK9 670 aaKnown RBP9.29□□□□□ -0.92
TRIM59-208ENST00000543469 VPS37CA5D8V6 355 aaPredicted RBP9.29□□□□□ -0.92
TRIM59-208ENST00000543469 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
TRIM59-208ENST00000543469 DDAH1O94760 285 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 TSGA10IPQ3SY00 556 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 ZNF274Q96GC6 653 aaPredicted RBP9.29□□□□□ -0.92
TRIM59-208ENST00000543469 TBC1D2Q9BYX2 928 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 SNX14Q9Y5W7 946 aa9.29□□□□□ -0.92
TRIM59-208ENST00000543469 PPP4CP60510 307 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms