RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 TEPSINQ96N21 525 aa14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 C1orf115Q9H7X2 142 aa14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 C9orf78Q9NZ63 289 aaPredicted RBP14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 TTF2Q9UNY4 1162 aaKnown RBP14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 OTOFQ9HC10 1997 aa14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 FAM205AQ6ZU69 1335 aa14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 TCP10L2B9ZVM9 353 aa14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 PRMT2P55345 433 aa14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 LACTBP83111 547 aaPredicted RBP14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 ATP8B2P98198 1209 aa14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 CDAN1Q8IWY9 1227 aa14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 DPF3Q92784 378 aa14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 ARHGAP39Q9C0H5 1083 aa14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 TMEM39BQ9GZU3 492 aa14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 ZCCHC17Q9NP64 241 aaKnown RBP14.24□□□□□ -0.13
SRGAP1-205ENST00000542841 CETPP11597 493 aa14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 FOXO4P98177 505 aa14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 MTX1Q13505 466 aa14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 LDHAL6AQ6ZMR3 332 aa14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 SIRT2Q8IXJ6 389 aa14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 DCTPP1Q9H773 170 aa14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 LRRFIP2Q9Y608 721 aaKnown RBP14.23□□□□□ -0.13
SRGAP1-205ENST00000542841 SPDYE5A6NIY4 337 aa14.22□□□□□ -0.13
SRGAP1-205ENST00000542841 NBPF7P0C2Y1 421 aaPredicted RBP14.22□□□□□ -0.13
SRGAP1-205ENST00000542841 SNAPC2Q13487 334 aa14.22□□□□□ -0.13
SRGAP1-205ENST00000542841 ERO1BQ86YB8 467 aa14.22□□□□□ -0.13
SRGAP1-205ENST00000542841 TDRD7Q8NHU6 1098 aaKnown RBP14.22□□□□□ -0.13
SRGAP1-205ENST00000542841 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
SRGAP1-205ENST00000542841 CNNM1Q9NRU3 951 aa14.22□□□□□ -0.13
SRGAP1-205ENST00000542841 RBM27Q9P2N5 1060 aaKnown RBP14.22□□□□□ -0.13
SRGAP1-205ENST00000542841 BTBD19C9JJ37 291 aa14.21□□□□□ -0.13
SRGAP1-205ENST00000542841 HIBADHP31937 336 aaKnown RBP14.21□□□□□ -0.13
SRGAP1-205ENST00000542841 CRKP46108 304 aa14.21□□□□□ -0.13
SRGAP1-205ENST00000542841 SSH3Q8TE77 659 aa14.21□□□□□ -0.13
SRGAP1-205ENST00000542841 IRF6O14896 467 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 GYG1P46976 350 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 NUCB1Q02818 461 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 POLA2Q14181 598 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 LMBR1LQ6UX01 489 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 HOOK2Q96ED9 719 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 ZNF594Q96JF6 807 aaPredicted RBP14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 WRNIP1Q96S55 665 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 HTATIP2Q9BUP3 242 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 TRIOBPQ9H2D6 2365 aa14.2□□□□□ -0.14
SRGAP1-205ENST00000542841 A0A1B0GUL6 1792 aa14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 HOXD10P28358 340 aa14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 UBE4AQ14139 1066 aa14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 MTFR1Q15390 333 aa14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 RAET1EQ8TD07 263 aa14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 SHISA4Q96DD7 197 aa14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 FAM84BQ96KN1 310 aaPredicted RBP14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 SRRDQ9UH36 339 aa14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 RANBP2P49792 3224 aaKnown RBP14.19□□□□□ -0.14
SRGAP1-205ENST00000542841 CEP290O15078 2479 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 PSMC4P43686 418 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 GJA8P48165 433 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 HDLBPQ00341 1268 aaKnown RBP14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 PPIL2Q13356 520 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 HSP90AB4PQ58FF6 505 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 C17orf99Q6UX52 265 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 CHD1LQ86WJ1 897 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 VPS37DQ86XT2 251 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 SLC17A8Q8NDX2 589 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 ZKSCAN4Q969J2 545 aaPredicted RBP14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 TMOD2Q9NZR1 351 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 ARAP2Q8WZ64 1704 aa14.18□□□□□ -0.14
SRGAP1-205ENST00000542841 DLL1O00548 723 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 RAB11FIP3O75154 756 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 GRK4P32298 578 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 CACNB3P54284 484 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 RABL6Q3YEC7 729 aaPredicted RBP14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 DCAF15Q66K64 600 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 TBC1D22AQ8WUA7 517 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 TEKT1Q969V4 418 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 TRIM47Q96LD4 638 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 RIPOR2Q9Y4F9 1068 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 NR2E3Q9Y5X4 410 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 ZSWIM8A7E2V4 1837 aa14.17□□□□□ -0.14
SRGAP1-205ENST00000542841 PNMA6EA0A0J9YXQ4 647 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 FRAT2O75474 233 aaPredicted RBP14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 GJB1P08034 283 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 CCL5P13501 91 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 OSBPP22059 807 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 PPATQ06203 517 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 EPHA10Q5JZY3 1008 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 FAM83AQ86UY5 434 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 SUCLG2Q96I99 432 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 RNF208Q9H0X6 261 aa14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 BIN2Q9UBW5 565 aaPredicted RBP14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 NOP58Q9Y2X3 529 aaKnown RBP14.16□□□□□ -0.14
SRGAP1-205ENST00000542841 PDHXO00330 501 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms