RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 CCDC85AQ96PX6 553 aaPredicted RBP14.9□□□□□ -0.02
DDX11-223ENST00000542838 TMX1Q9H3N1 280 aa14.9□□□□□ -0.02
DDX11-223ENST00000542838 DDX60Q8IY21 1712 aaKnown RBP14.9□□□□□ -0.02
DDX11-223ENST00000542838 WDR19Q8NEZ3 1342 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 PNMA6AP0CW24 399 aaPredicted RBP14.89□□□□□ -0.03
DDX11-223ENST00000542838 PI16Q6UXB8 463 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 REXO1L1PQ8IX06 675 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 DENND2AQ9ULE3 1009 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 ERICH4A6NGS2 130 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 PTPAQ15257 358 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 TMCO3Q6UWJ1 677 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 SRRTQ9BXP5 876 aaKnown RBP14.89□□□□□ -0.03
DDX11-223ENST00000542838 FANCLQ9NW38 375 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 ANGEL1Q9UNK9 670 aaKnown RBP14.89□□□□□ -0.03
DDX11-223ENST00000542838 CDKL5O76039 1030 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 TAF7LQ5H9L4 462 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 RESP18Q5W5W9 173 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 CPLX2Q6PUV4 134 aaKnown RBP14.89□□□□□ -0.03
DDX11-223ENST00000542838 FAM177A1Q8N128 213 aaPredicted RBP14.89□□□□□ -0.03
DDX11-223ENST00000542838 PHKBQ93100 1093 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 CARD6Q9BX69 1037 aa14.89□□□□□ -0.03
DDX11-223ENST00000542838 ALS2Q96Q42 1657 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 ZSCAN12O43309 604 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 METTL16Q86W50 562 aaKnown RBP14.88□□□□□ -0.03
DDX11-223ENST00000542838 CNNM3Q8NE01 707 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 CABLES1Q8TDN4 633 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 MYH7P12883 1935 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 C1orf167Q5SNV9 1468 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 FAM193AP78312 1265 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 CCDC102BQ68D86 513 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 CYB5R4Q7L1T6 521 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 RGS22Q8NE09 1264 aa14.88□□□□□ -0.03
DDX11-223ENST00000542838 FANCGO15287 622 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 CDC27P30260 824 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 PLA2G4AP47712 749 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 LONRF3Q496Y0 759 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 FCHSD1Q86WN1 690 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 PROSER2Q86WR7 435 aaPredicted RBP14.87□□□□□ -0.03
DDX11-223ENST00000542838 MAP3K14Q99558 947 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 NBPF3Q9H094 633 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 PCDHA5Q9Y5H7 936 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 PKD1L3Q7Z443 1732 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 CUTAO60888 179 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 TADA3O75528 432 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 KRBA2Q6ZNG9 492 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 MICU3Q86XE3 530 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 NKX2-3Q8TAU0 364 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 DDX17Q92841 729 aaKnown RBP14.87□□□□□ -0.03
DDX11-223ENST00000542838 PARP3Q9Y6F1 533 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 COL18A1P39060 1754 aa14.87□□□□□ -0.03
DDX11-223ENST00000542838 FAM237AA0A1B0GTK4 181 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 SH2B2O14492 632 aaPredicted RBP14.86□□□□□ -0.03
DDX11-223ENST00000542838 ARHGAP6O43182 974 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 ZRANB2O95218 330 aaKnown RBP eCLIP14.86□□□□□ -0.03
DDX11-223ENST00000542838 APPP05067 770 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 TRIM29Q14134 588 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 HSP90AA4PQ58FG1 418 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 CREBRFQ8IUR6 639 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 TBC1D10CQ8IV04 446 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
DDX11-223ENST00000542838 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■■■■□ 22.1
DDX11-223ENST00000542838 KCNH3Q9ULD8 1083 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 PPP2R2CQ9Y2T4 447 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 VWA3AA6NCI4 1184 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 EFCAB8A8MWE9 144 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 MYO1BO43795 1136 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 APOA5Q6Q788 366 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 PDILTQ8N807 584 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 C19orf44Q9H6X5 657 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 MST1RQ04912 1400 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 IARSP41252 1262 aaKnown RBP14.86□□□□□ -0.03
DDX11-223ENST00000542838 PDE4BQ07343 736 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 TMEM139Q8IV31 216 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 SENP2Q9HC62 589 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 FBXO3Q9UK99 471 aa14.86□□□□□ -0.03
DDX11-223ENST00000542838 TPM1P09493 284 aa14.85□□□□□ -0.03
DDX11-223ENST00000542838 NFXL1Q6ZNB6 911 aa14.85□□□□□ -0.03
DDX11-223ENST00000542838 INTS13Q9NVM9 706 aa14.85□□□□□ -0.03
DDX11-223ENST00000542838 B4E1Z4 1266 aa14.85□□□□□ -0.03
DDX11-223ENST00000542838 FOXN1O15353 648 aa14.85□□□□□ -0.03
DDX11-223ENST00000542838 ZBTB43O43298 467 aa14.85□□□□□ -0.03
DDX11-223ENST00000542838 SEC31AO94979 1220 aaKnown RBP14.85□□□□□ -0.03
DDX11-223ENST00000542838 CASQ1P31415 396 aa14.85□□□□□ -0.03
DDX11-223ENST00000542838 BAG1Q99933 345 aaPredicted RBP14.85□□□□□ -0.03
DDX11-223ENST00000542838 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDX11-223ENST00000542838 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.85□□□□□ -0.03
DDX11-223ENST00000542838 ZNF330Q9Y3S2 320 aaPredicted RBP14.85□□□□□ -0.03
DDX11-223ENST00000542838 ABCC12Q96J65 1359 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 ADD2P35612 726 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 MCAMP43121 646 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 SPECC1Q5M775 1068 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 SLC9C2Q5TAH2 1124 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 MPHOSPH8Q99549 860 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 ISCA1Q9BUE6 129 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 ECM29Q5VYK3 1845 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 GOLGA8AA7E2F4 631 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
DDX11-223ENST00000542838 BMP6P22004 513 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 GNG11P61952 73 aa14.84□□□□□ -0.03
DDX11-223ENST00000542838 IFIT5Q13325 482 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms