RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 APPP05067 770 aa15.8■□□□□ 0.12
CHFR-221ENST00000542714 PPP4CP60510 307 aa15.8■□□□□ 0.12
CHFR-221ENST00000542714 HAND2P61296 217 aa15.8■□□□□ 0.12
CHFR-221ENST00000542714 FKBP1AP62942 108 aaKnown RBP15.8■□□□□ 0.12
CHFR-221ENST00000542714 KRT32Q14532 448 aa15.8■□□□□ 0.12
CHFR-221ENST00000542714 STRIP1Q5VSL9 837 aa15.8■□□□□ 0.12
CHFR-221ENST00000542714 RUFY3Q7L099 469 aa15.8■□□□□ 0.12
CHFR-221ENST00000542714 SDR42E1Q8WUS8 393 aa15.8■□□□□ 0.12
CHFR-221ENST00000542714 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
CHFR-221ENST00000542714 MYH1P12882 1939 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 E7EWF7 191 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 LDHCP07864 332 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 RPS6KB1P23443 525 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 PSMA5P28066 241 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 IMMTQ16891 758 aaKnown RBP15.79■□□□□ 0.12
CHFR-221ENST00000542714 TBC1D10CQ8IV04 446 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 FAM163AQ96GL9 167 aaPredicted RBP15.79■□□□□ 0.12
CHFR-221ENST00000542714 NEK1Q96PY6 1258 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 VPS33BQ9H267 617 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
CHFR-221ENST00000542714 GPR75-ASB3A0A0A6YYF3 556 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 USP17L3A6NCW0 530 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 USP17L4A6NCW7 530 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 IARSP41252 1262 aaKnown RBP15.78■□□□□ 0.12
CHFR-221ENST00000542714 BTDP43251 543 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 BLOC1S2Q6QNY1 142 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 USP17L1Q7RTZ2 530 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 LARGE2Q8N3Y3 721 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 IL27Q8NEV9 243 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 SH3RF3Q8TEJ3 882 aaPredicted RBP15.78■□□□□ 0.12
CHFR-221ENST00000542714 CRNKL1Q9BZJ0 848 aaKnown RBP15.78■□□□□ 0.12
CHFR-221ENST00000542714 NAPBQ9H115 298 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 TAOK3Q9H2K8 898 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 DAGLAQ9Y4D2 1042 aa15.78■□□□□ 0.12
CHFR-221ENST00000542714 DICER1Q9UPY3 1922 aaKnown RBP15.78■□□□□ 0.12
CHFR-221ENST00000542714 LTBP3Q9NS15 1303 aa15.77■□□□□ 0.12
CHFR-221ENST00000542714 F8W031 263 aaPredicted RBP15.77■□□□□ 0.12
CHFR-221ENST00000542714 TDO2P48775 406 aa15.77■□□□□ 0.12
CHFR-221ENST00000542714 PRELPP51888 382 aa15.77■□□□□ 0.12
CHFR-221ENST00000542714 AK2P54819 239 aa15.77■□□□□ 0.12
CHFR-221ENST00000542714 NKX2-3Q8TAU0 364 aa15.77■□□□□ 0.12
CHFR-221ENST00000542714 NACAP1Q9BZK3 213 aa15.77■□□□□ 0.12
CHFR-221ENST00000542714 FHDC1Q9C0D6 1143 aaPredicted RBP15.77■□□□□ 0.12
CHFR-221ENST00000542714 PDRG1Q9NUG6 133 aa15.77■□□□□ 0.12
CHFR-221ENST00000542714 TTF2Q9UNY4 1162 aaKnown RBP15.77■□□□□ 0.12
CHFR-221ENST00000542714 SBF1O95248 1867 aa15.76■□□□□ 0.11
CHFR-221ENST00000542714 SMIM22K7EJ46 135 aa15.76■□□□□ 0.11
CHFR-221ENST00000542714 ZNF213O14771 459 aa15.76■□□□□ 0.11
CHFR-221ENST00000542714 RHBDL3P58872 404 aa15.76■□□□□ 0.11
CHFR-221ENST00000542714 CTDSPL2Q05D32 466 aa15.76■□□□□ 0.11
CHFR-221ENST00000542714 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
CHFR-221ENST00000542714 SLF2Q8IX21 1173 aa15.76■□□□□ 0.11
CHFR-221ENST00000542714 TCEANC2Q96MN5 208 aa15.76■□□□□ 0.11
CHFR-221ENST00000542714 ALDH8A1Q9H2A2 487 aaPredicted RBP15.76■□□□□ 0.11
CHFR-221ENST00000542714 DCP1AQ9NPI6 582 aaPredicted RBP15.76■□□□□ 0.11
CHFR-221ENST00000542714 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
CHFR-221ENST00000542714 NEDD4P46934 1319 aa15.75■□□□□ 0.11
CHFR-221ENST00000542714 MCM2P49736 904 aa15.75■□□□□ 0.11
CHFR-221ENST00000542714 SCNN1DP51172 638 aa15.75■□□□□ 0.11
CHFR-221ENST00000542714 EXOSC10Q01780 885 aaKnown RBP15.75■□□□□ 0.11
CHFR-221ENST00000542714 RASSF7Q02833 373 aa15.75■□□□□ 0.11
CHFR-221ENST00000542714 NOL8Q76FK4 1167 aaKnown RBP15.75■□□□□ 0.11
CHFR-221ENST00000542714 MB21D2Q8IYB1 491 aaPredicted RBP15.75■□□□□ 0.11
CHFR-221ENST00000542714 TMX3Q96JJ7 454 aa15.75■□□□□ 0.11
CHFR-221ENST00000542714 MKRN1Q9UHC7 482 aaKnown RBP15.75■□□□□ 0.11
CHFR-221ENST00000542714 ANAPC4Q9UJX5 808 aa15.75■□□□□ 0.11
CHFR-221ENST00000542714 CYP2D7A0A087X1C5 515 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 PSMD14O00487 310 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 BAG3O95817 575 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 EVX2Q03828 476 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 PPARAQ07869 468 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 TOB2Q14106 344 aaPredicted RBP15.74■□□□□ 0.11
CHFR-221ENST00000542714 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 HHIPL2Q6UWX4 724 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 NIM1KQ8IY84 436 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 SPRYD3Q8NCJ5 442 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 NOL10Q9BSC4 688 aaKnown RBP15.74■□□□□ 0.11
CHFR-221ENST00000542714 ATP8A2Q9NTI2 1148 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 ZNRF3Q9ULT6 936 aa15.74■□□□□ 0.11
CHFR-221ENST00000542714 RAD17O75943 681 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 LARGE1O95461 756 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 VIL1P09327 827 aaKnown RBP15.73■□□□□ 0.11
CHFR-221ENST00000542714 HMGB1P09429 215 aaKnown RBP15.73■□□□□ 0.11
CHFR-221ENST00000542714 CRKP46108 304 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 ANTXR2P58335 489 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 RSBN1LQ6PCB5 846 aaPredicted RBP15.73■□□□□ 0.11
CHFR-221ENST00000542714 DHX32Q7L7V1 743 aaKnown RBP15.73■□□□□ 0.11
CHFR-221ENST00000542714 CERS3Q8IU89 383 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 KIAA0825Q8IV33 1275 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 GMLQ99445 158 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 LARP6Q9BRS8 491 aaKnown RBP15.73■□□□□ 0.11
CHFR-221ENST00000542714 INCENPQ9NQS7 918 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 PCDHAC2Q9Y5I4 1007 aa15.73■□□□□ 0.11
CHFR-221ENST00000542714 USP17L12C9JPN9 530 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 USP17L21D6R901 530 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 CYP2D6P10635 497 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 PLCG2P16885 1265 aa15.72■□□□□ 0.11
CHFR-221ENST00000542714 HDLBPQ00341 1268 aaKnown RBP15.72■□□□□ 0.11
CHFR-221ENST00000542714 CUL4AQ13619 759 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms