RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 MROH7-TTC4A0A0A0MT08 1334 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 A0A1W2PQ27 194 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 A0A1W2PQ64 194 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 A0A1W2PQD8 194 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 SPTLC2O15270 562 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 TOP1P11387 765 aaKnown RBP17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 PFKFB1P16118 471 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 MARCKSP29966 332 aaPredicted RBP17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 ATL3Q6DD88 541 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 PDILTQ8N807 584 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 DESI2Q9BSY9 194 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 VPS18Q9P253 973 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 PCDH11XQ9BZA7 1347 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 PCDH11YQ9BZA8 1340 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 MCM6Q14566 821 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 MCMDC2Q4G0Z9 681 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 PDE11AQ9HCR9 933 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 PARP4Q9UKK3 1724 aaKnown RBP17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 A0A087WZG4 1122 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 ZSCAN12O43309 604 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 N4BP1O75113 896 aaKnown RBP17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 A1BGP04217 495 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 PTPN12Q05209 780 aaKnown RBP17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 EXOC4Q96A65 974 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 SUGCTQ9HAC7 445 aa17.09■□□□□ 0.33
AC005840.4-201ENST00000541242 ANKRD65E5RJM6 399 aa17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 ACTN2P35609 894 aa17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 CASP7P55210 303 aa17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 ADKP55263 362 aaKnown RBP17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 PLBD2Q8NHP8 589 aa17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 KIFC2Q96AC6 838 aa17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 MPHOSPH8Q99549 860 aa17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 INTS13Q9NVM9 706 aa17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 FANCLQ9NW38 375 aa17.08■□□□□ 0.33
AC005840.4-201ENST00000541242 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
AC005840.4-201ENST00000541242 TFCP2Q12800 502 aa17.08■□□□□ 0.32
AC005840.4-201ENST00000541242 PNOCQ13519 176 aa17.08■□□□□ 0.32
AC005840.4-201ENST00000541242 WWC2Q6AWC2 1192 aa17.08■□□□□ 0.32
AC005840.4-201ENST00000541242 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.32
AC005840.4-201ENST00000541242 EFCC1Q9HA90 598 aa17.08■□□□□ 0.32
AC005840.4-201ENST00000541242 LAMB4A4D0S4 1761 aa17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 KIF28PB7ZC32 967 aa17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 IKBKBO14920 756 aa17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 DBNDD2Q9BQY9 259 aa17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 COPRSQ9NQ92 184 aa17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 IL2RBP14784 551 aa17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 RABL6Q3YEC7 729 aaPredicted RBP17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 RABGGTAQ92696 567 aa17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 PUF60Q9UHX1 559 aaKnown RBP17.07■□□□□ 0.32
AC005840.4-201ENST00000541242 A0A0U1RQJ8 604 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 E7EWF7 191 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 ARHGAP6O43182 974 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 TFRCP02786 760 aaKnown RBP17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 ATP5JP18859 108 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 AXDND1Q5T1B0 1012 aaPredicted RBP17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 ATRIPQ8WXE1 791 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 GOLGA1Q92805 767 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 BAG1Q99933 345 aaPredicted RBP17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 MYL5Q02045 173 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 MTF1Q14872 753 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 MYSM1Q5VVJ2 828 aa17.06■□□□□ 0.32
AC005840.4-201ENST00000541242 MAP2K7O14733 419 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 TXLNAP40222 546 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 TNNI3KQ59H18 835 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 C8orf76Q96K31 380 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 FPGT-TNNI3KV9GXZ4 949 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 ABCA3Q99758 1704 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 SHANK3Q9BYB0 1731 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 DHX8Q14562 1220 aaKnown RBP17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 TTLL5Q6EMB2 1281 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 PLEKHA4Q9H4M7 779 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 POLR3EQ9NVU0 708 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 PSD3Q9NYI0 1048 aa17.05■□□□□ 0.32
AC005840.4-201ENST00000541242 UBR2Q8IWV8 1755 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 CBFA2T2O43439 604 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 CDC27P30260 824 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 PDE4BQ07343 736 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 LMBR1LQ6UX01 489 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 LEKR1Q6ZMV7 388 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 PNKPQ96T60 521 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 AGXT2Q9BYV1 514 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 MRPL44Q9H9J2 332 aaKnown RBP17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 FAN1Q9Y2M0 1017 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 PHACTR2O75167 634 aa17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 HMGB1P09429 215 aaKnown RBP17.04■□□□□ 0.32
AC005840.4-201ENST00000541242 FOXO4P98177 505 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms