RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CCDC150Q8NCX0 1101 aa11.97□□□□□ -0.49
CDC42SE1-207ENST00000540998 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
CDC42SE1-207ENST00000540998 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
CDC42SE1-207ENST00000540998 PCDHA5Q9Y5H7 936 aa11.97□□□□□ -0.49
CDC42SE1-207ENST00000540998 IDH1O75874 414 aaKnown RBP11.96□□□□□ -0.49
CDC42SE1-207ENST00000540998 SASH3O75995 380 aa11.96□□□□□ -0.49
CDC42SE1-207ENST00000540998 FMR1Q06787 632 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDC42SE1-207ENST00000540998 HELBQ8NG08 1087 aaPredicted RBP11.96□□□□□ -0.49
CDC42SE1-207ENST00000540998 KAT6BQ8WYB5 2073 aa11.96□□□□□ -0.49
CDC42SE1-207ENST00000540998 ZNF213O14771 459 aa11.96□□□□□ -0.5
CDC42SE1-207ENST00000540998 RANBP6O60518 1105 aaKnown RBP11.96□□□□□ -0.5
CDC42SE1-207ENST00000540998 ST5P78524 1137 aa11.96□□□□□ -0.5
CDC42SE1-207ENST00000540998 TEX35Q5T0J7 233 aa11.96□□□□□ -0.5
CDC42SE1-207ENST00000540998 USP49Q70CQ1 688 aa11.96□□□□□ -0.5
CDC42SE1-207ENST00000540998 REXO1L1PQ8IX06 675 aa11.96□□□□□ -0.5
CDC42SE1-207ENST00000540998 SMIM22K7EJ46 135 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 YEATS4O95619 227 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 UBXN4Q92575 508 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 NOL10Q9BSC4 688 aaKnown RBP11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 FAM53CQ9NYF3 392 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 VWA3AA6NCI4 1184 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 CMA1P23946 247 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 MCAMP43121 646 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 METAP2P50579 478 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 TAF7LQ5H9L4 462 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 MNS1Q8NEH6 495 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 NCOA7Q8NI08 942 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 PARP3Q9Y6F1 533 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 SLC39A14Q15043 492 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 CCDC57Q2TAC2 916 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 CPLX3Q8WVH0 158 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 TACC3Q9Y6A5 838 aa11.95□□□□□ -0.5
CDC42SE1-207ENST00000540998 EVCP57679 992 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 GNG11P61952 73 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 MYL5Q02045 173 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 PTPAQ15257 358 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 SLC9C2Q5TAH2 1124 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 RFX7Q2KHR2 1363 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 OVOS2A0A0G2JMS6 1433 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 FER1L4A9Z1Z3 1794 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 SCN11AQ9UI33 1791 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 BTBD18B2RXH4 712 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 RRP12Q5JTH9 1297 aaKnown RBP11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 TMEM139Q8IV31 216 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 SLC26A6Q9BXS9 759 aa11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 PIH1D3Q9NQM4 214 aaKnown RBP11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 SAMSN1Q9NSI8 373 aaKnown RBP11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 MYO5AQ9Y4I1 1855 aaKnown RBP11.94□□□□□ -0.5
CDC42SE1-207ENST00000540998 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 CNNM3Q8NE01 707 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 MED15Q96RN5 788 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 WWC3Q9ULE0 1092 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 PPP2R2CQ9Y2T4 447 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 BAZ2BQ9UIF8 2168 aaKnown RBP11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 TADA3O75528 432 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 STX17P56962 302 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 NR5A1Q13285 461 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 ATL3Q6DD88 541 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 KLHL10Q6JEL2 608 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 APOA5Q6Q788 366 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 PROSER2Q86WR7 435 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 TOMM22Q9NS69 142 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 TPM4P67936 248 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 BRAPQ7Z569 592 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 VSTM4Q8IW00 320 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 MAP3K14Q99558 947 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 LZTFL1Q9NQ48 299 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 KCNH3Q9ULD8 1083 aa11.93□□□□□ -0.5
CDC42SE1-207ENST00000540998 APPBP2Q92624 585 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 STAMQ92783 540 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 CHMP4CQ96CF2 233 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 BPIFA3Q9BQP9 254 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 MRPL44Q9H9J2 332 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 UBN2Q6ZU65 1347 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 POLR2DO15514 142 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 ABL1P00519 1130 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 BMS1Q14692 1282 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 DHX58Q96C10 678 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 FAM217BQ9NTX9 383 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 ANGEL1Q9UNK9 670 aaKnown RBP11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 HPSEQ9Y251 543 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 NFE2L3Q9Y4A8 694 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 SLIT3O75094 1523 aa11.92□□□□□ -0.5
CDC42SE1-207ENST00000540998 SOWAHDA6NJG2 315 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 TEX33O43247 280 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 HNRNPH2P55795 449 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 METTL24Q5JXM2 366 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 TMCO3Q6UWJ1 677 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 GREM2Q9H772 168 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms