RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PRAMEF22A3QJZ6 481 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 TCERG1O14776 1098 aaKnown RBP6.16□□□□□ -1.42
SNHG1-214ENST00000540865 RAD21O60216 631 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 RAD17O75943 681 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 FXR1P51114 621 aaKnown RBP eCLIP6.16□□□□□ -1.42
SNHG1-214ENST00000540865 KIAA2012Q0VF49 1180 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 AGERQ15109 404 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 NOM1Q5C9Z4 860 aaKnown RBP6.16□□□□□ -1.42
SNHG1-214ENST00000540865 FBXO46Q6PJ61 603 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-214ENST00000540865 DPP8Q6V1X1 898 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-214ENST00000540865 SH3BP5LQ7L8J4 393 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 ARMC2Q8NEN0 867 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 DPF2Q92785 391 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 HDAC9Q9UKV0 1011 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 IBTKQ9P2D0 1353 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-214ENST00000540865 TRPM7Q96QT4 1865 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 CUL9Q8IWT3 2517 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 BBOX1O75936 387 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 FBXO45P0C2W1 286 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 VAC14Q08AM6 782 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 DLK2Q6UY11 383 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 SLC51AQ86UW1 340 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 MPNDQ8N594 471 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 ZNF296Q8WUU4 475 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-214ENST00000540865 DCPSQ96C86 337 aaKnown RBP6.15□□□□□ -1.42
SNHG1-214ENST00000540865 NLRP3Q96P20 1036 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 PRM3Q9NNZ6 103 aa6.15□□□□□ -1.42
SNHG1-214ENST00000540865 HTTP42858 3142 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 SHTN1A0MZ66 631 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 YDJCA8MPS7 323 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 ADM5C9JUS6 153 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 J3QL48 77 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 NTSR2O95665 410 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 RPS12P25398 132 aaKnown RBP6.14□□□□□ -1.43
SNHG1-214ENST00000540865 WNT7BP56706 349 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 FKBP1BP68106 108 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 TBC1D10BQ4KMP7 808 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-214ENST00000540865 SLC10A5Q5PT55 438 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 SUSD4Q5VX71 490 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 INTS3Q68E01 1043 aaKnown RBP6.14□□□□□ -1.43
SNHG1-214ENST00000540865 PDXDC2PQ6P474 469 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 SH3RF1Q7Z6J0 888 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 RASAL3Q86YV0 1011 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 SP8Q8IXZ3 490 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 PNMA1Q8ND90 353 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 ARHGAP9Q9BRR9 750 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 SENP2Q9HC62 589 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 MAP3K15Q6ZN16 1313 aa6.14□□□□□ -1.43
SNHG1-214ENST00000540865 CACNA1SQ13698 1873 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 RANBP2P49792 3224 aaKnown RBP6.13□□□□□ -1.43
SNHG1-214ENST00000540865 BRCA2P51587 3418 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 POM121CA8CG34 1229 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 ZBBXA8MT70 800 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 GPR25O00155 361 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 WNT7AO00755 349 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 GPTP24298 496 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 PTK2Q05397 1052 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 PARP10Q53GL7 1025 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 KIF6Q6ZMV9 814 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 PPP1R42Q7Z4L9 355 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 ZNF34Q8IZ26 560 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 EHBP1Q8NDI1 1231 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 SNIP1Q8TAD8 396 aaKnown RBP6.13□□□□□ -1.43
SNHG1-214ENST00000540865 ADAM32Q8TC27 787 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 GPKOWQ92917 476 aaPredicted RBP eCLIP6.13□□□□□ -1.432e-31■■■□□ 17.2
SNHG1-214ENST00000540865 CDCA5Q96FF9 252 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 MRGPRX2Q96LB1 330 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 CFHR5Q9BXR6 569 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 ZMYND15Q9H091 742 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 ABCC4O15439 1325 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 UBN2Q6ZU65 1347 aa6.13□□□□□ -1.43
SNHG1-214ENST00000540865 PSMD14O00487 310 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 U2SURPO15042 1029 aaKnown RBP6.12□□□□□ -1.43
SNHG1-214ENST00000540865 FKTNO75072 461 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 TBC1D8O95759 1140 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 EGFRP00533 1210 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 TM4SF4P48230 202 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 TMC4Q7Z404 712 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 ZBTB33Q86T24 672 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 BPHLQ86WA6 291 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-214ENST00000540865 NGEFQ8N5V2 710 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
SNHG1-214ENST00000540865 HPS1Q92902 700 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 CENPFP49454 3210 aa6.12□□□□□ -1.43
SNHG1-214ENST00000540865 FAM181BA6NEQ2 426 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 A6NJR5 290 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 HTATSF1O43719 755 aaKnown RBP6.11□□□□□ -1.43
SNHG1-214ENST00000540865 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-214ENST00000540865 GMPRP36959 345 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 EIF4G2P78344 907 aaKnown RBP eCLIP6.11□□□□□ -1.43
SNHG1-214ENST00000540865 NR1H3Q13133 447 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 GRAPQ13588 217 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 WASHC4Q2M389 1173 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 KIF4BQ2VIQ3 1234 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 TTLL7Q6ZT98 887 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 DDX46Q7L014 1031 aaKnown RBP6.11□□□□□ -1.43
SNHG1-214ENST00000540865 GRAPLQ8TC17 118 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-214ENST00000540865 PHACTR3Q96KR7 559 aa6.11□□□□□ -1.43
SNHG1-214ENST00000540865 UTP14AQ9BVJ6 771 aaKnown RBP6.11□□□□□ -1.43
SNHG1-214ENST00000540865 GGA3Q9NZ52 723 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms