RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 DPEP1P16444 411 aa29.07■■■□□ 2.24
TTC3-225ENST00000540756 ANTXR2P58335 489 aa29.07■■■□□ 2.24
TTC3-225ENST00000540756 TNPO1Q92973 898 aaKnown RBP29.07■■■□□ 2.24
TTC3-225ENST00000540756 MXD3Q9BW11 206 aa29.07■■■□□ 2.24
TTC3-225ENST00000540756 NEDD4P46934 1319 aa29.07■■■□□ 2.24
TTC3-225ENST00000540756 C21orf2O43822 256 aa29.06■■■□□ 2.24
TTC3-225ENST00000540756 NCOA7Q8NI08 942 aa29.06■■■□□ 2.24
TTC3-225ENST00000540756 UPF1Q92900 1129 aaKnown RBP eCLIP29.06■■■□□ 2.24
TTC3-225ENST00000540756 FBXW7Q969H0 707 aa29.06■■■□□ 2.24
TTC3-225ENST00000540756 DBNDD1Q9H9R9 158 aa29.06■■■□□ 2.24
TTC3-225ENST00000540756 KCNQ5Q9NR82 932 aa29.06■■■□□ 2.24
TTC3-225ENST00000540756 SH2B1Q9NRF2 756 aaPredicted RBP29.06■■■□□ 2.24
TTC3-225ENST00000540756 DLEC1Q9Y238 1755 aa29.06■■■□□ 2.24
TTC3-225ENST00000540756 FGD1P98174 961 aa29.06■■■□□ 2.24
TTC3-225ENST00000540756 FAM205AQ6ZU69 1335 aa29.05■■■□□ 2.24
TTC3-225ENST00000540756 CYP2D7A0A087X1C5 515 aa29.05■■■□□ 2.24
TTC3-225ENST00000540756 APOBRQ0VD83 1088 aa29.05■■■□□ 2.24
TTC3-225ENST00000540756 ZDHHC9Q9Y397 364 aa29.05■■■□□ 2.24
TTC3-225ENST00000540756 KIAA1551Q9HCM1 1747 aa29.05■■■□□ 2.24
TTC3-225ENST00000540756 EVX2Q03828 476 aa29.04■■■□□ 2.24
TTC3-225ENST00000540756 SNED1Q8TER0 1413 aa29.04■■■□□ 2.24
TTC3-225ENST00000540756 B4E1Z4 1266 aa29.04■■■□□ 2.24
TTC3-225ENST00000540756 PRC1O43663 620 aa29.04■■■□□ 2.24
TTC3-225ENST00000540756 CYB5R4Q7L1T6 521 aa29.04■■■□□ 2.24
TTC3-225ENST00000540756 RALYLQ86SE5 291 aaKnown RBP29.04■■■□□ 2.24
TTC3-225ENST00000540756 AGXT2Q9BYV1 514 aa29.04■■■□□ 2.24
TTC3-225ENST00000540756 UTRNP46939 3433 aa29.04■■■□□ 2.24
TTC3-225ENST00000540756 MINDY4BA8MYZ0 360 aa29.03■■■□□ 2.24
TTC3-225ENST00000540756 CERS5Q8N5B7 392 aa29.03■■■□□ 2.24
TTC3-225ENST00000540756 EYA3Q99504 573 aa29.03■■■□□ 2.24
TTC3-225ENST00000540756 MCM5P33992 734 aa29.02■■■□□ 2.24
TTC3-225ENST00000540756 TTLL6Q8N841 843 aa29.02■■■□□ 2.24
TTC3-225ENST00000540756 KIF13BQ9NQT8 1826 aa29.02■■■□□ 2.24
TTC3-225ENST00000540756 PPARAQ07869 468 aa29.01■■■□□ 2.24
TTC3-225ENST00000540756 SH3RF3Q8TEJ3 882 aaPredicted RBP29.01■■■□□ 2.24
TTC3-225ENST00000540756 RTFDC1Q9BY42 306 aaPredicted RBP29.01■■■□□ 2.24
TTC3-225ENST00000540756 G3V3G9 751 aa29.01■■■□□ 2.23
TTC3-225ENST00000540756 TRDNQ13061 729 aa29.01■■■□□ 2.23
TTC3-225ENST00000540756 DCAF8Q5TAQ9 597 aa29.01■■■□□ 2.23
TTC3-225ENST00000540756 FOXD4L5Q5VV16 416 aaPredicted RBP29.01■■■□□ 2.23
TTC3-225ENST00000540756 FOXD4L4Q8WXT5 416 aaPredicted RBP29.01■■■□□ 2.23
TTC3-225ENST00000540756 MTFR1LQ9H019 292 aa29.01■■■□□ 2.23
TTC3-225ENST00000540756 DCP1AQ9NPI6 582 aaPredicted RBP29.01■■■□□ 2.23
TTC3-225ENST00000540756 TIAM2Q8IVF5 1701 aa29■■■□□ 2.23
TTC3-225ENST00000540756 SCN9AQ15858 1988 aa29■■■□□ 2.23
TTC3-225ENST00000540756 PSDA5PKW4 1024 aaPredicted RBP29■■■□□ 2.23
TTC3-225ENST00000540756 AKNAD1Q5T1N1 836 aa29■■■□□ 2.23
TTC3-225ENST00000540756 TBC1D22AQ8WUA7 517 aa29■■■□□ 2.23
TTC3-225ENST00000540756 CRNKL1Q9BZJ0 848 aaKnown RBP29■■■□□ 2.23
TTC3-225ENST00000540756 ZSCAN21Q9Y5A6 473 aaPredicted RBP29■■■□□ 2.23
TTC3-225ENST00000540756 MROH7-TTC4A0A0A0MT08 1334 aa29■■■□□ 2.23
TTC3-225ENST00000540756 F8W031 263 aaPredicted RBP28.99■■■□□ 2.23
TTC3-225ENST00000540756 GSTO1P78417 241 aa28.99■■■□□ 2.23
TTC3-225ENST00000540756 AOC3Q16853 763 aa28.99■■■□□ 2.23
TTC3-225ENST00000540756 CTR9Q6PD62 1173 aa28.99■■■□□ 2.23
TTC3-225ENST00000540756 NUCB2P80303 420 aa28.99■■■□□ 2.23
TTC3-225ENST00000540756 SMC3Q9UQE7 1217 aa28.99■■■□□ 2.23
TTC3-225ENST00000540756 USP17L12C9JPN9 530 aa28.98■■■□□ 2.23
TTC3-225ENST00000540756 USP17L21D6R901 530 aa28.98■■■□□ 2.23
TTC3-225ENST00000540756 TMED8Q6PL24 325 aaPredicted RBP28.98■■■□□ 2.23
TTC3-225ENST00000540756 MFSD6Q6ZSS7 791 aa28.98■■■□□ 2.23
TTC3-225ENST00000540756 STAG1Q8WVM7 1258 aa28.98■■■□□ 2.23
TTC3-225ENST00000540756 GJB2P29033 226 aa28.98■■■□□ 2.23
TTC3-225ENST00000540756 SCRN1Q12765 414 aa28.98■■■□□ 2.23
TTC3-225ENST00000540756 SLC4A8Q2Y0W8 1093 aa28.98■■■□□ 2.23
TTC3-225ENST00000540756 RRP12Q5JTH9 1297 aaKnown RBP28.98■■■□□ 2.23
TTC3-225ENST00000540756 GTF3C6Q969F1 213 aa28.98■■■□□ 2.23
TTC3-225ENST00000540756 KDM4AO75164 1064 aa28.97■■■□□ 2.23
TTC3-225ENST00000540756 CYP2D6P10635 497 aa28.97■■■□□ 2.23
TTC3-225ENST00000540756 SENP2Q9HC62 589 aa28.97■■■□□ 2.23
TTC3-225ENST00000540756 ZSWIM5Q9P217 1185 aa28.97■■■□□ 2.23
TTC3-225ENST00000540756 BRPF3Q9ULD4 1205 aa28.97■■■□□ 2.23
TTC3-225ENST00000540756 NAP1L2Q9ULW6 460 aaPredicted RBP28.97■■■□□ 2.23
TTC3-225ENST00000540756 BTDP43251 543 aa28.96■■■□□ 2.23
TTC3-225ENST00000540756 FBXL16Q8N461 479 aa28.96■■■□□ 2.23
TTC3-225ENST00000540756 ECE2O60344 883 aa28.96■■■□□ 2.23
TTC3-225ENST00000540756 CHAMP1Q96JM3 812 aa28.96■■■□□ 2.23
TTC3-225ENST00000540756 TOMM22Q9NS69 142 aa28.96■■■□□ 2.23
TTC3-225ENST00000540756 PPP1R1BQ9UD71 204 aaPredicted RBP28.96■■■□□ 2.23
TTC3-225ENST00000540756 LDHCP07864 332 aa28.95■■■□□ 2.23
TTC3-225ENST00000540756 PDIA3P30101 505 aaKnown RBP28.95■■■□□ 2.23
TTC3-225ENST00000540756 PPP4CP60510 307 aa28.95■■■□□ 2.23
TTC3-225ENST00000540756 CCT2P78371 535 aaKnown RBP28.95■■■□□ 2.23
TTC3-225ENST00000540756 ATP8A2Q9NTI2 1148 aa28.95■■■□□ 2.23
TTC3-225ENST00000540756 ANAPC4Q9UJX5 808 aa28.95■■■□□ 2.23
TTC3-225ENST00000540756 SRCAPQ6ZRS2 3230 aa28.95■■■□□ 2.22
TTC3-225ENST00000540756 CDK5RAP2Q96SN8 1893 aa28.95■■■□□ 2.22
TTC3-225ENST00000540756 POLD1P28340 1107 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 GIMAP6Q6P9H5 292 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 PODNQ7Z5L7 613 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 RAB11FIP4Q86YS3 637 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 NCOA5Q9HCD5 579 aaKnown RBP28.94■■■□□ 2.22
TTC3-225ENST00000540756 MKRN1Q9UHC7 482 aaKnown RBP28.94■■■□□ 2.22
TTC3-225ENST00000540756 GPR75-ASB3A0A0A6YYF3 556 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 PFKFB2O60825 505 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 IGSF3O75054 1194 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 BAG3O95817 575 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 USP17L8P0C7I0 530 aa28.94■■■□□ 2.22
TTC3-225ENST00000540756 JAK2O60674 1132 aa28.93■■■□□ 2.22
TTC3-225ENST00000540756 MCM4P33991 863 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms