RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ALX1Q15699 326 aa16.96■□□□□ 0.31
CYB561A3-216ENST00000540755 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
CYB561A3-216ENST00000540755 ADGRA1Q86SQ6 560 aa16.96■□□□□ 0.31
CYB561A3-216ENST00000540755 SUPT20HQ8NEM7 779 aa16.96■□□□□ 0.31
CYB561A3-216ENST00000540755 TTC14Q96N46 770 aa16.96■□□□□ 0.31
CYB561A3-216ENST00000540755 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
CYB561A3-216ENST00000540755 MYH2Q9UKX2 1941 aa16.96■□□□□ 0.31
CYB561A3-216ENST00000540755 MAGEB6P1A0A0J9YX57 407 aa16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 PATL2C9JE40 543 aaKnown RBP16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 FZD9O00144 591 aa16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 LDHBP07195 334 aaKnown RBP16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 RUFY3Q7L099 469 aa16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 DZIP1Q86YF9 867 aaKnown RBP16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 LCORLQ8N3X6 602 aa16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 RIOK1Q9BRS2 568 aaKnown RBP16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 ARMT1Q9H993 441 aa16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 JAG2Q9Y219 1238 aa16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 CYP46A1Q9Y6A2 500 aa16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 ZNF646O15015 1829 aaPredicted RBP16.95■□□□□ 0.3
CYB561A3-216ENST00000540755 IQCA1LA6NCM1 817 aa16.94■□□□□ 0.3
CYB561A3-216ENST00000540755 GSTO1P78417 241 aa16.94■□□□□ 0.3
CYB561A3-216ENST00000540755 IMMTQ16891 758 aaKnown RBP16.94■□□□□ 0.3
CYB561A3-216ENST00000540755 TAF6LQ9Y6J9 622 aa16.94■□□□□ 0.3
CYB561A3-216ENST00000540755 BLOC1S2Q6QNY1 142 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 PODNQ7Z5L7 613 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 MIGA1Q8NAN2 632 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 NEK1Q96PY6 1258 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 SLC4A4Q9Y6R1 1079 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 PSME4Q14997 1843 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 PASKQ96RG2 1323 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 RPS6KB1P23443 525 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 MFSD14BQ5SR56 506 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 LDHDQ86WU2 507 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 IFNL3Q8IZI9 196 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 ALDH8A1Q9H2A2 487 aaPredicted RBP16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 PDRG1Q9NUG6 133 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 SUGT1Q9Y2Z0 365 aa16.93■□□□□ 0.3
CYB561A3-216ENST00000540755 GSG1L2A8MUP6 293 aa16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 G3V3G9 751 aa16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 ZNF213O14771 459 aa16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 APPP05067 770 aa16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 LDHCP07864 332 aa16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 HMGB1P09429 215 aaKnown RBP16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 KIAA2012Q0VF49 1180 aa16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 STOX1Q6ZVD7 989 aa16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 EPB41L4AQ9HCS5 686 aaPredicted RBP16.92■□□□□ 0.3
CYB561A3-216ENST00000540755 SCN9AQ15858 1988 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 E7EWF7 191 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 CPA1P15085 419 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 AK2P54819 239 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 GTF2IP78347 998 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 DOK7Q18PE1 504 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 NAPBQ9H115 298 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 LAMB1P07942 1786 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 CDK5RAP2Q96SN8 1893 aa16.91■□□□□ 0.3
CYB561A3-216ENST00000540755 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 PRKAB2O43741 272 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 FKBP1AP62942 108 aaKnown RBP16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 DYNLL1P63167 89 aaKnown RBP16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 GRIK5Q16478 980 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 GIMAP6Q6P9H5 292 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 CERS3Q8IU89 383 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 SLF2Q8IX21 1173 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 GPC2Q8N158 579 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 TMX3Q96JJ7 454 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 CREBZFQ9NS37 354 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 HACL1Q9UJ83 578 aa16.9■□□□□ 0.3
CYB561A3-216ENST00000540755 MROH7-TTC4A0A0A0MT08 1334 aa16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 ECE2O60344 883 aa16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 ITGBL1O95965 494 aaPredicted RBP16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 EPHX2P34913 555 aa16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 ANKRD1Q15327 319 aa16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 FAM163AQ96GL9 167 aaPredicted RBP16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 DBNDD1Q9H9R9 158 aa16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 AATFQ9NY61 560 aaKnown RBP eCLIP16.89■□□□□ 0.29
CYB561A3-216ENST00000540755 BAG3O95817 575 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 TDO2P48775 406 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 PPP4CP60510 307 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 HAND2P61296 217 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 CUL4AQ13619 759 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 AOC3Q16853 763 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 DHX32Q7L7V1 743 aaKnown RBP16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 JDP2Q8WYK2 163 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 ANP32EQ9BTT0 268 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 CRNKL1Q9BZJ0 848 aaKnown RBP16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 LIMCH1Q9UPQ0 1083 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 FOCADQ5VW36 1801 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 GAKO14976 1311 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 NAV1Q8NEY1 1877 aa16.88■□□□□ 0.29
CYB561A3-216ENST00000540755 EAPPQ56P03 285 aaPredicted RBP16.87■□□□□ 0.29
CYB561A3-216ENST00000540755 COL13A1Q5TAT6 717 aaPredicted RBP16.87■□□□□ 0.29
CYB561A3-216ENST00000540755 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
CYB561A3-216ENST00000540755 LARGE2Q8N3Y3 721 aa16.87■□□□□ 0.29
CYB561A3-216ENST00000540755 SPRYD3Q8NCJ5 442 aa16.87■□□□□ 0.29
CYB561A3-216ENST00000540755 SDR42E1Q8WUS8 393 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms