RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PLA2G12BQ9BX93 195 aa14.21□□□□□ -0.14
NPC1-202ENST00000540608 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.21□□□□□ -0.143e-6■■■□□ 16.8
NPC1-202ENST00000540608 ANGEL1Q9UNK9 670 aaKnown RBP14.21□□□□□ -0.14
NPC1-202ENST00000540608 TOGARAM1Q9Y4F4 1720 aa14.21□□□□□ -0.14
NPC1-202ENST00000540608 MROH7-TTC4A0A0A0MT08 1334 aa14.21□□□□□ -0.14
NPC1-202ENST00000540608 CCP110O43303 1012 aa14.2□□□□□ -0.14
NPC1-202ENST00000540608 CSF1RP07333 972 aa14.2□□□□□ -0.14
NPC1-202ENST00000540608 SYT10Q6XYQ8 523 aa14.2□□□□□ -0.14
NPC1-202ENST00000540608 JMYQ8N9B5 988 aa14.2□□□□□ -0.14
NPC1-202ENST00000540608 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
NPC1-202ENST00000540608 PTPAQ15257 358 aa14.2□□□□□ -0.14
NPC1-202ENST00000540608 TAF7LQ5H9L4 462 aa14.2□□□□□ -0.14
NPC1-202ENST00000540608 VPS37DQ86XT2 251 aa14.2□□□□□ -0.14
NPC1-202ENST00000540608 CBFA2T2O43439 604 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 PCCAP05165 728 aaPredicted RBP14.19□□□□□ -0.14
NPC1-202ENST00000540608 METAP2P50579 478 aaKnown RBP eCLIP14.19□□□□□ -0.14
NPC1-202ENST00000540608 IFIT5Q13325 482 aaKnown RBP14.19□□□□□ -0.14
NPC1-202ENST00000540608 KRT40Q6A162 431 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 ISM2Q6H9L7 571 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 SHC4Q6S5L8 630 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 TMOD3Q9NYL9 352 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 ASAP1Q9ULH1 1129 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 SH2B2O14492 632 aaPredicted RBP14.19□□□□□ -0.14
NPC1-202ENST00000540608 IGSF3O75054 1194 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 ATP1A3P13637 1013 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 ADD2P35612 726 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 UBASH3AP57075 661 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 PI16Q6UXB8 463 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 SYNE4Q8N205 404 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 AIFM3Q96NN9 605 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 MAP3K14Q99558 947 aa14.19□□□□□ -0.14
NPC1-202ENST00000540608 MYO1BO43795 1136 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 SLFN14P0C7P3 912 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 MYL5Q02045 173 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 RESP18Q5W5W9 173 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 CPLX2Q6PUV4 134 aaKnown RBP14.18□□□□□ -0.14
NPC1-202ENST00000540608 CYB5R4Q7L1T6 521 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 ZNF512BQ96KM6 892 aaPredicted RBP14.18□□□□□ -0.14
NPC1-202ENST00000540608 TMX1Q9H3N1 280 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.18□□□□□ -0.14
NPC1-202ENST00000540608 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 MCAMP43121 646 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 EVA1CP58658 441 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 RIPOR2Q9Y4F9 1068 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 MYH7P12883 1935 aa14.18□□□□□ -0.14
NPC1-202ENST00000540608 H2AFXP16104 143 aaPredicted RBP14.17□□□□□ -0.14
NPC1-202ENST00000540608 ETF1P62495 437 aaKnown RBP14.17□□□□□ -0.14
NPC1-202ENST00000540608 ZNF771Q7L3S4 317 aaPredicted RBP14.17□□□□□ -0.14
NPC1-202ENST00000540608 TBC1D10CQ8IV04 446 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
NPC1-202ENST00000540608 DENND2AQ9ULE3 1009 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.17□□□□□ -0.143e-6■□□□□ 9.4
NPC1-202ENST00000540608 ABCA3Q99758 1704 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 PHLPP2Q6ZVD8 1323 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 SERPINC1P01008 464 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 GNL2Q13823 731 aaKnown RBP14.17□□□□□ -0.14
NPC1-202ENST00000540608 TTF1Q15361 905 aaPredicted RBP14.17□□□□□ -0.14
NPC1-202ENST00000540608 ERCC6LQ2NKX8 1250 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 SLC9C2Q5TAH2 1124 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 APOA5Q6Q788 366 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 NKX2-3Q8TAU0 364 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 PIGBQ92521 554 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 DPF2Q92785 391 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
NPC1-202ENST00000540608 CUTAO60888 179 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 CDC27P30260 824 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 PNOCQ13519 176 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 UBE3CQ15386 1083 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 METTL24Q5JXM2 366 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 OLFM4Q6UX06 510 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 KIF6Q6ZMV9 814 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 HOMER1Q86YM7 354 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 TMEM87BQ96K49 555 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 ZNF446Q9NWS9 450 aa14.17□□□□□ -0.14
NPC1-202ENST00000540608 ATRNO75882 1429 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 TERF2Q15554 542 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 NTRK3Q16288 839 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 ELOA2Q8IYF1 753 aaPredicted RBP14.16□□□□□ -0.14
NPC1-202ENST00000540608 IGDCC4Q8TDY8 1250 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.16□□□□□ -0.14
NPC1-202ENST00000540608 RIC1Q4ADV7 1423 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 IARSP41252 1262 aaKnown RBP14.16□□□□□ -0.14
NPC1-202ENST00000540608 TRIM29Q14134 588 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 HLFQ16534 295 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 CFAP100Q494V2 611 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 CCDC102BQ68D86 513 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 PHKBQ93100 1093 aa14.16□□□□□ -0.14
NPC1-202ENST00000540608 NPHP1O15259 732 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 ZBTB43O43298 467 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 APPP05067 770 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 RXRAP19793 462 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 GPTP24298 496 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 TRIM65Q6PJ69 517 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 KRBA2Q6ZNG9 492 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 METTL16Q86W50 562 aaKnown RBP14.15□□□□□ -0.14
NPC1-202ENST00000540608 LRRN4CLQ8ND94 238 aa14.15□□□□□ -0.14
NPC1-202ENST00000540608 CLIC6Q96NY7 704 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms