RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
INO80E-203ENST00000540562 ARMCX5Q6P1M9 558 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 ST7Q9NRC1 585 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 SCN11AQ9UI33 1791 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 ARFGEF2Q9Y6D5 1785 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 TNS3Q68CZ2 1445 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 KLHL10Q6JEL2 608 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 EPC1Q9H2F5 836 aa16.34■□□□□ 0.21
INO80E-203ENST00000540562 STARD3NLO95772 234 aa16.33■□□□□ 0.21
INO80E-203ENST00000540562 SFPQP23246 707 aaKnown RBP eCLIP16.33■□□□□ 0.21
INO80E-203ENST00000540562 GTF2F1P35269 517 aaKnown RBP eCLIP16.33■□□□□ 0.216e-7■■■■□ 20.4
INO80E-203ENST00000540562 CTSWP56202 376 aa16.33■□□□□ 0.21
INO80E-203ENST00000540562 TRIM29Q14134 588 aa16.33■□□□□ 0.21
INO80E-203ENST00000540562 LONRF3Q496Y0 759 aa16.33■□□□□ 0.21
INO80E-203ENST00000540562 SHC4Q6S5L8 630 aa16.33■□□□□ 0.21
INO80E-203ENST00000540562 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.21
INO80E-203ENST00000540562 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.21
INO80E-203ENST00000540562 FAM205CA6NFA0 338 aa16.33■□□□□ 0.2
INO80E-203ENST00000540562 SMTNL1A8MU46 457 aa16.33■□□□□ 0.2
INO80E-203ENST00000540562 ERVV-2B6SEH9 535 aa16.33■□□□□ 0.2
INO80E-203ENST00000540562 ADD2P35612 726 aa16.33■□□□□ 0.2
INO80E-203ENST00000540562 MTERF4Q7Z6M4 381 aaKnown RBP16.33■□□□□ 0.2
INO80E-203ENST00000540562 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
INO80E-203ENST00000540562 RIPOR2Q9Y4F9 1068 aa16.33■□□□□ 0.2
INO80E-203ENST00000540562 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.2
INO80E-203ENST00000540562 LAMA4Q16363 1823 aa16.33■□□□□ 0.2
INO80E-203ENST00000540562 PDIA4P13667 645 aaKnown RBP16.32■□□□□ 0.2
INO80E-203ENST00000540562 USP49Q70CQ1 688 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
INO80E-203ENST00000540562 MPHOSPH8Q99549 860 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 SLC12A7Q9Y666 1083 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 EVX2Q03828 476 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 AXDND1Q5T1B0 1012 aaPredicted RBP16.32■□□□□ 0.2
INO80E-203ENST00000540562 CCAR2Q8N163 923 aaKnown RBP16.32■□□□□ 0.2
INO80E-203ENST00000540562 MRFAP1L1Q96HT8 127 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 CIAO1O76071 339 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.32■□□□□ 0.2
INO80E-203ENST00000540562 CNNM3Q8NE01 707 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 EPB41L4AQ9HCS5 686 aaPredicted RBP16.32■□□□□ 0.2
INO80E-203ENST00000540562 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 FANCLQ9NW38 375 aa16.32■□□□□ 0.2
INO80E-203ENST00000540562 CAMTA1Q9Y6Y1 1673 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
INO80E-203ENST00000540562 STX17P56962 302 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 FANCCQ00597 558 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 ERCC6LQ2NKX8 1250 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 LCORLQ8N3X6 602 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 CPLX3Q8WVH0 158 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 UTP14AQ9BVJ6 771 aaKnown RBP16.31■□□□□ 0.2
INO80E-203ENST00000540562 LRP2BPQ9P2M1 347 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 DNAI1Q9UI46 699 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 MRC1P22897 1456 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 ZNF335Q9H4Z2 1342 aaPredicted RBP16.31■□□□□ 0.2
INO80E-203ENST00000540562 UBASH3AP57075 661 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 LRRFIP1Q32MZ4 808 aaKnown RBP16.31■□□□□ 0.2
INO80E-203ENST00000540562 E4F1Q66K89 784 aaPredicted RBP16.31■□□□□ 0.2
INO80E-203ENST00000540562 OXER1Q8TDS5 423 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 SLAIN2Q9P270 581 aa16.31■□□□□ 0.2
INO80E-203ENST00000540562 PDE8BO95263 885 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 PDE4BQ07343 736 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 GIGYF2Q6Y7W6 1299 aaKnown RBP16.3■□□□□ 0.2
INO80E-203ENST00000540562 SLC4A4Q9Y6R1 1079 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 ADAMTS2O95450 1211 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 AFMP43652 599 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 ZSWIM4Q9H7M6 989 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 PCDHA5Q9Y5H7 936 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
INO80E-203ENST00000540562 ZFYP08048 801 aaPredicted RBP16.3■□□□□ 0.2
INO80E-203ENST00000540562 PRR29P0C7W0 189 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 FOXP4Q8IVH2 680 aaPredicted RBP16.3■□□□□ 0.2
INO80E-203ENST00000540562 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
INO80E-203ENST00000540562 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
INO80E-203ENST00000540562 UBN2Q6ZU65 1347 aa16.29■□□□□ 0.2
INO80E-203ENST00000540562 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
INO80E-203ENST00000540562 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
INO80E-203ENST00000540562 ZSCAN20P17040 1043 aaPredicted RBP16.29■□□□□ 0.2
INO80E-203ENST00000540562 CDK11BP21127 795 aaKnown RBP16.29■□□□□ 0.2
INO80E-203ENST00000540562 ADKP55263 362 aaKnown RBP16.29■□□□□ 0.2
INO80E-203ENST00000540562 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
INO80E-203ENST00000540562 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
INO80E-203ENST00000540562 CPLX2Q6PUV4 134 aaKnown RBP16.29■□□□□ 0.2
INO80E-203ENST00000540562 SPATA5Q8NB90 893 aa16.29■□□□□ 0.2
INO80E-203ENST00000540562 DIS3L2Q8IYB7 885 aaKnown RBP16.28■□□□□ 0.2
INO80E-203ENST00000540562 DESI2Q9BSY9 194 aa16.28■□□□□ 0.2
INO80E-203ENST00000540562 NCAPHQ15003 741 aa16.28■□□□□ 0.2
INO80E-203ENST00000540562 NOM1Q5C9Z4 860 aaKnown RBP16.28■□□□□ 0.2
INO80E-203ENST00000540562 SARM1Q6SZW1 724 aa16.28■□□□□ 0.2
INO80E-203ENST00000540562 KIF18AQ8NI77 898 aa16.28■□□□□ 0.2
INO80E-203ENST00000540562 ANKRD7Q92527 254 aa16.28■□□□□ 0.2
INO80E-203ENST00000540562 PPP1R13BQ96KQ4 1090 aa16.28■□□□□ 0.2
INO80E-203ENST00000540562 STRBPQ96SI9 672 aaKnown RBP16.28■□□□□ 0.2
INO80E-203ENST00000540562 CABP5Q9NP86 173 aa16.28■□□□□ 0.2
INO80E-203ENST00000540562 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
INO80E-203ENST00000540562 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
INO80E-203ENST00000540562 CTIFO43310 598 aaKnown RBP16.27■□□□□ 0.2
INO80E-203ENST00000540562 GYG1P46976 350 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 459.6 ms