RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TTLL5Q6EMB2 1281 aa14.16□□□□□ -0.14
TMEM258-205ENST00000540434 OTUD7BQ6GQQ9 843 aa14.16□□□□□ -0.14
TMEM258-205ENST00000540434 TDRD7Q8NHU6 1098 aaKnown RBP14.16□□□□□ -0.14
TMEM258-205ENST00000540434 COL1A1P02452 1464 aaPredicted RBP14.16□□□□□ -0.14
TMEM258-205ENST00000540434 OTOFQ9HC10 1997 aa14.16□□□□□ -0.14
TMEM258-205ENST00000540434 HIBADHP31937 336 aaKnown RBP14.15□□□□□ -0.14
TMEM258-205ENST00000540434 IL15P40933 162 aaPredicted RBP14.15□□□□□ -0.14
TMEM258-205ENST00000540434 RRP1P56182 461 aaKnown RBP14.15□□□□□ -0.14
TMEM258-205ENST00000540434 UBE2Q1Q7Z7E8 422 aa14.15□□□□□ -0.14
TMEM258-205ENST00000540434 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
TMEM258-205ENST00000540434 HDAC5Q9UQL6 1122 aa14.15□□□□□ -0.14
TMEM258-205ENST00000540434 AOX1Q06278 1338 aa14.15□□□□□ -0.15
TMEM258-205ENST00000540434 USP2O75604 605 aaPredicted RBP14.14□□□□□ -0.15
TMEM258-205ENST00000540434 TAF1CQ15572 869 aaPredicted RBP14.14□□□□□ -0.15
TMEM258-205ENST00000540434 KIAA0825Q8IV33 1275 aa14.14□□□□□ -0.15
TMEM258-205ENST00000540434 HTATIP2Q9BUP3 242 aa14.14□□□□□ -0.15
TMEM258-205ENST00000540434 ELP3Q9H9T3 547 aa14.14□□□□□ -0.15
TMEM258-205ENST00000540434 CEP126Q9P2H0 1117 aa14.14□□□□□ -0.15
TMEM258-205ENST00000540434 FBXO3Q9UK99 471 aa14.14□□□□□ -0.15
TMEM258-205ENST00000540434 STXBP5LQ9Y2K9 1186 aa14.14□□□□□ -0.15
TMEM258-205ENST00000540434 PPP1R12BO60237 982 aaPredicted RBP14.13□□□□□ -0.15
TMEM258-205ENST00000540434 MS4A1P11836 297 aa14.13□□□□□ -0.15
TMEM258-205ENST00000540434 PUM3Q15397 648 aaKnown RBP14.13□□□□□ -0.15
TMEM258-205ENST00000540434 ATP2B3Q16720 1220 aa14.13□□□□□ -0.15
TMEM258-205ENST00000540434 NBPF12Q5TAG4 269 aaPredicted RBP14.13□□□□□ -0.15
TMEM258-205ENST00000540434 ZNF804AQ7Z570 1209 aa14.13□□□□□ -0.15
TMEM258-205ENST00000540434 FAM43AQ8N2R8 423 aa14.13□□□□□ -0.15
TMEM258-205ENST00000540434 BRI3BPQ8WY22 251 aa14.13□□□□□ -0.15
TMEM258-205ENST00000540434 MS4A4AQ96JQ5 239 aa14.13□□□□□ -0.15
TMEM258-205ENST00000540434 DDX19BQ9UMR2 479 aa14.13□□□□□ -0.15
TMEM258-205ENST00000540434 NR2E3Q9Y5X4 410 aa14.13□□□□□ -0.15
TMEM258-205ENST00000540434 A0A1W2PPC1 479 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 SURF6O75683 361 aaKnown RBP14.12□□□□□ -0.15
TMEM258-205ENST00000540434 CTGFP29279 349 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 PHKA1P46020 1223 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.12□□□□□ -0.15
TMEM258-205ENST00000540434 MTMR14Q8NCE2 650 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 LPIN2Q92539 896 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 OPTNQ96CV9 577 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 ZFYVE28Q9HCC9 887 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 MTMR10Q9NXD2 777 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 NOP58Q9Y2X3 529 aaKnown RBP14.12□□□□□ -0.15
TMEM258-205ENST00000540434 FAM205AQ6ZU69 1335 aa14.12□□□□□ -0.15
TMEM258-205ENST00000540434 A0A1B0GUL7 405 aa14.11□□□□□ -0.15
TMEM258-205ENST00000540434 F8W031 263 aaPredicted RBP14.11□□□□□ -0.15
TMEM258-205ENST00000540434 CRBNQ96SW2 442 aa14.11□□□□□ -0.15
TMEM258-205ENST00000540434 EXOC6BQ9Y2D4 811 aa14.11□□□□□ -0.15
TMEM258-205ENST00000540434 PPP2R3BQ9Y5P8 575 aa14.11□□□□□ -0.15
TMEM258-205ENST00000540434 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 CCL15-CCL14A0A0B4J2E2 113 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 CLRN2A0PK11 232 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 IFIT1P09914 478 aaKnown RBP14.1□□□□□ -0.15
TMEM258-205ENST00000540434 CCL5P13501 91 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 SLC5A1P13866 664 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 GJA8P48165 433 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 CHAF1AQ13111 956 aaPredicted RBP14.1□□□□□ -0.15
TMEM258-205ENST00000540434 G3BP1Q13283 466 aaKnown RBP eCLIP14.1□□□□□ -0.15
TMEM258-205ENST00000540434 ARHGEF6Q15052 776 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 DLGAP5Q15398 846 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 CCL15Q16663 113 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 SUPT20HL1Q3ZLR7 823 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.1□□□□□ -0.15
TMEM258-205ENST00000540434 XAGE2Q96GT9 111 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
TMEM258-205ENST00000540434 EVI5O60447 810 aa14.09□□□□□ -0.15
TMEM258-205ENST00000540434 IREB2P48200 963 aaKnown RBP14.09□□□□□ -0.15
TMEM258-205ENST00000540434 LACTBP83111 547 aaPredicted RBP14.09□□□□□ -0.15
TMEM258-205ENST00000540434 ANKRD13AQ8IZ07 590 aa14.09□□□□□ -0.15
TMEM258-205ENST00000540434 PRMT6Q96LA8 375 aaPredicted RBP14.09□□□□□ -0.15
TMEM258-205ENST00000540434 PRDM6Q9NQX0 595 aa14.09□□□□□ -0.15
TMEM258-205ENST00000540434 TLR7Q9NYK1 1049 aaKnown RBP14.09□□□□□ -0.15
TMEM258-205ENST00000540434 RAPGEFL1Q9UHV5 662 aa14.09□□□□□ -0.15
TMEM258-205ENST00000540434 FARP2O94887 1054 aaPredicted RBP14.08□□□□□ -0.16
TMEM258-205ENST00000540434 CAVIN4Q5BKX8 364 aa14.08□□□□□ -0.16
TMEM258-205ENST00000540434 MFSD14BQ5SR56 506 aa14.08□□□□□ -0.16
TMEM258-205ENST00000540434 CCDC102BQ68D86 513 aa14.08□□□□□ -0.16
TMEM258-205ENST00000540434 PI16Q6UXB8 463 aa14.08□□□□□ -0.16
TMEM258-205ENST00000540434 RPAP2Q8IXW5 612 aaPredicted RBP14.08□□□□□ -0.16
TMEM258-205ENST00000540434 EAF2Q96CJ1 260 aaPredicted RBP14.08□□□□□ -0.16
TMEM258-205ENST00000540434 NEUROD6Q96NK8 337 aa14.08□□□□□ -0.16
TMEM258-205ENST00000540434 RNF208Q9H0X6 261 aa14.08□□□□□ -0.16
TMEM258-205ENST00000540434 SUPT16HQ9Y5B9 1047 aaKnown RBP14.08□□□□□ -0.16
TMEM258-205ENST00000540434 GJB1P08034 283 aa14.07□□□□□ -0.16
TMEM258-205ENST00000540434 FKBP1AP62942 108 aaKnown RBP14.07□□□□□ -0.16
TMEM258-205ENST00000540434 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.07□□□□□ -0.16
TMEM258-205ENST00000540434 VPS37DQ86XT2 251 aa14.07□□□□□ -0.16
TMEM258-205ENST00000540434 CDAN1Q8IWY9 1227 aa14.07□□□□□ -0.16
TMEM258-205ENST00000540434 NKX2-3Q8TAU0 364 aa14.07□□□□□ -0.16
TMEM258-205ENST00000540434 DBNDD2Q9BQY9 259 aa14.07□□□□□ -0.16
TMEM258-205ENST00000540434 VEZTQ9HBM0 779 aa14.07□□□□□ -0.16
TMEM258-205ENST00000540434 ALPK3Q96L96 1907 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 MYH13Q9UKX3 1938 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 SPDYE2BA6NHP3 402 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 APBB1O00213 710 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 SPDYE6P0CI01 402 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 GRK4P32298 578 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 RASA3Q14644 834 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 KIF22Q14807 665 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 CFAP100Q494V2 611 aa14.06□□□□□ -0.16
TMEM258-205ENST00000540434 TNNI3KQ59H18 835 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms