RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MAP7D2Q96T17 732 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 TACC3Q9Y6A5 838 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 RIC1Q4ADV7 1423 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 MINDY4BA8MYZ0 360 aa15.83■□□□□ 0.13
BNIP3-202ENST00000540159 RANBP6O60518 1105 aaKnown RBP15.83■□□□□ 0.13
BNIP3-202ENST00000540159 CSF1RP07333 972 aa15.83■□□□□ 0.13
BNIP3-202ENST00000540159 GRIN1Q05586 938 aa15.83■□□□□ 0.13
BNIP3-202ENST00000540159 RASGRF1Q13972 1273 aa15.83■□□□□ 0.13
BNIP3-202ENST00000540159 ZNF827Q17R98 1081 aa15.83■□□□□ 0.13
BNIP3-202ENST00000540159 ZHX1Q9UKY1 873 aaPredicted RBP15.83■□□□□ 0.13
BNIP3-202ENST00000540159 CPDO75976 1380 aa15.83■□□□□ 0.13
BNIP3-202ENST00000540159 TJP1Q07157 1748 aa15.83■□□□□ 0.13
BNIP3-202ENST00000540159 NBPF11Q86T75 865 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 MPHOSPH8Q99549 860 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 ZSWIM5Q9P217 1185 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 ZBTB43O43298 467 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 SYKP43405 635 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 TDO2P48775 406 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 GRAMD1CQ8IYS0 662 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 CCDC24Q8N4L8 307 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 SDR42E1Q8WUS8 393 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 ZBTB9Q96C00 473 aa15.83■□□□□ 0.12
BNIP3-202ENST00000540159 EPB41L4AQ9HCS5 686 aaPredicted RBP15.83■□□□□ 0.12
BNIP3-202ENST00000540159 BTBD18B2RXH4 712 aa15.82■□□□□ 0.12
BNIP3-202ENST00000540159 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
BNIP3-202ENST00000540159 NCBP1Q09161 790 aaKnown RBP15.82■□□□□ 0.12
BNIP3-202ENST00000540159 KCNG4Q8TDN1 519 aa15.82■□□□□ 0.12
BNIP3-202ENST00000540159 CCDC94Q9BW85 323 aaPredicted RBP15.82■□□□□ 0.12
BNIP3-202ENST00000540159 JAG2Q9Y219 1238 aa15.82■□□□□ 0.12
BNIP3-202ENST00000540159 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
BNIP3-202ENST00000540159 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
BNIP3-202ENST00000540159 PTPN14Q15678 1187 aa15.82■□□□□ 0.12
BNIP3-202ENST00000540159 PRDM1O75626 825 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 ADAMTS2O95450 1211 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 CCZ1BP86790 482 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 CCZ1P86791 482 aaPredicted RBP15.81■□□□□ 0.12
BNIP3-202ENST00000540159 AXDND1Q5T1B0 1012 aaPredicted RBP15.81■□□□□ 0.12
BNIP3-202ENST00000540159 BICDL1Q6ZP65 573 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 DPF2Q92785 391 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 NAT10Q9H0A0 1025 aaKnown RBP15.81■□□□□ 0.12
BNIP3-202ENST00000540159 SH2B2O14492 632 aaPredicted RBP15.81■□□□□ 0.12
BNIP3-202ENST00000540159 CYP19A1P11511 503 aaPredicted RBP15.81■□□□□ 0.12
BNIP3-202ENST00000540159 NR5A1Q13285 461 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 SHC4Q6S5L8 630 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.81■□□□□ 0.12
BNIP3-202ENST00000540159 LCORLQ8N3X6 602 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 CYP2D7A0A087X1C5 515 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.121e-7■■■■■ 37.2
BNIP3-202ENST00000540159 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 SPATA5Q8NB90 893 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 SLC12A7Q9Y666 1083 aa15.81■□□□□ 0.12
BNIP3-202ENST00000540159 SRCAPQ6ZRS2 3230 aa15.8■□□□□ 0.12
BNIP3-202ENST00000540159 TRIM29Q14134 588 aa15.8■□□□□ 0.12
BNIP3-202ENST00000540159 IFNL3Q8IZI9 196 aa15.8■□□□□ 0.12
BNIP3-202ENST00000540159 MRFAP1L1Q96HT8 127 aa15.8■□□□□ 0.12
BNIP3-202ENST00000540159 STRBPQ96SI9 672 aaKnown RBP15.8■□□□□ 0.12
BNIP3-202ENST00000540159 POLR3EQ9NVU0 708 aa15.8■□□□□ 0.12
BNIP3-202ENST00000540159 LRP2BPQ9P2M1 347 aa15.8■□□□□ 0.12
BNIP3-202ENST00000540159 ZNF215Q9UL58 517 aaPredicted RBP15.8■□□□□ 0.12
BNIP3-202ENST00000540159 LONRF3Q496Y0 759 aa15.8■□□□□ 0.12
BNIP3-202ENST00000540159 TRMT44Q8IYL2 757 aaKnown RBP15.8■□□□□ 0.12
BNIP3-202ENST00000540159 SLC4A4Q9Y6R1 1079 aa15.8■□□□□ 0.12
BNIP3-202ENST00000540159 SERPINC1P01008 464 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 VGLL2Q8N8G2 317 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 PKD1L3Q7Z443 1732 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 COBLO75128 1261 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 EVX2Q03828 476 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 CFAP100Q494V2 611 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 ARMCX5Q6P1M9 558 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 LY9Q9HBG7 655 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 ZMYM6O95789 1325 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 FAM205CA6NFA0 338 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 PDE8AO60658 829 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 CASP1P29466 404 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 LRRN4CLQ8ND94 238 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 PKNOX2Q96KN3 472 aa15.79■□□□□ 0.12
BNIP3-202ENST00000540159 YEATS4O95619 227 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 CPLX2Q6PUV4 134 aaKnown RBP15.78■□□□□ 0.12
BNIP3-202ENST00000540159 SARM1Q6SZW1 724 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 IGDCC4Q8TDY8 1250 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.78■□□□□ 0.12
BNIP3-202ENST00000540159 FAM217BQ9NTX9 383 aaPredicted RBP15.78■□□□□ 0.12
BNIP3-202ENST00000540159 EVCP57679 992 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 SYT10Q6XYQ8 523 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 USP49Q70CQ1 688 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 BRAPQ7Z569 592 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 OXER1Q8TDS5 423 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 MTMR7Q9Y216 660 aa15.78■□□□□ 0.12
BNIP3-202ENST00000540159 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.12
BNIP3-202ENST00000540159 SMTNL1A8MU46 457 aa15.77■□□□□ 0.12
BNIP3-202ENST00000540159 GYG1P46976 350 aa15.77■□□□□ 0.12
BNIP3-202ENST00000540159 SLC39A14Q15043 492 aa15.77■□□□□ 0.12
BNIP3-202ENST00000540159 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.12
BNIP3-202ENST00000540159 HOMER1Q86YM7 354 aa15.77■□□□□ 0.12
BNIP3-202ENST00000540159 CNNM3Q8NE01 707 aa15.77■□□□□ 0.12
BNIP3-202ENST00000540159 LAMB4A4D0S4 1761 aa15.77■□□□□ 0.12
BNIP3-202ENST00000540159 SFPQP23246 707 aaKnown RBP eCLIP15.77■□□□□ 0.111e-6■■■■□ 21.4
BNIP3-202ENST00000540159 FANCCQ00597 558 aa15.77■□□□□ 0.11
BNIP3-202ENST00000540159 TRIM28Q13263 835 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms