RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 APOBEC3HQ6NTF7 200 aaKnown RBP18.56■□□□□ 0.56
DDB1-216ENST00000539739 ADGRA1Q86SQ6 560 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 MIGA1Q8NAN2 632 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 ZNF526Q8TF50 670 aaPredicted RBP18.56■□□□□ 0.56
DDB1-216ENST00000539739 OSBP2Q969R2 916 aa18.56■□□□□ 0.56
DDB1-216ENST00000539739 AATFQ9NY61 560 aaKnown RBP eCLIP18.56■□□□□ 0.56
DDB1-216ENST00000539739 MYH7P12883 1935 aa18.55■□□□□ 0.56
DDB1-216ENST00000539739 WDR90Q96KV7 1748 aa18.55■□□□□ 0.56
DDB1-216ENST00000539739 WNT10BO00744 389 aa18.55■□□□□ 0.56
DDB1-216ENST00000539739 PPP4CP60510 307 aa18.55■□□□□ 0.56
DDB1-216ENST00000539739 NMIQ13287 307 aaPredicted RBP18.55■□□□□ 0.56
DDB1-216ENST00000539739 CWC27Q6UX04 472 aaKnown RBP18.55■□□□□ 0.56
DDB1-216ENST00000539739 USP50Q70EL3 339 aaPredicted RBP18.55■□□□□ 0.56
DDB1-216ENST00000539739 PNMA8AQ86V59 439 aaPredicted RBP18.55■□□□□ 0.56
DDB1-216ENST00000539739 PRMT6Q96LA8 375 aaPredicted RBP18.55■□□□□ 0.56
DDB1-216ENST00000539739 PUS7LQ9H0K6 701 aaKnown RBP18.55■□□□□ 0.56
DDB1-216ENST00000539739 TAF1DQ9H5J8 278 aaPredicted RBP18.55■□□□□ 0.56
DDB1-216ENST00000539739 RRAGCQ9HB90 399 aa18.55■□□□□ 0.56
DDB1-216ENST00000539739 POTECB2RU33 542 aa18.54■□□□□ 0.56
DDB1-216ENST00000539739 MCMDC2Q4G0Z9 681 aa18.54■□□□□ 0.56
DDB1-216ENST00000539739 TRPM4Q8TD43 1214 aa18.54■□□□□ 0.56
DDB1-216ENST00000539739 ZBED3Q96IU2 234 aaPredicted RBP18.54■□□□□ 0.56
DDB1-216ENST00000539739 FAM227BQ96M60 508 aa18.54■□□□□ 0.56
DDB1-216ENST00000539739 USP40Q9NVE5 1235 aa18.54■□□□□ 0.56
DDB1-216ENST00000539739 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
DDB1-216ENST00000539739 PCDHAC2Q9Y5I4 1007 aa18.54■□□□□ 0.56
DDB1-216ENST00000539739 SCN4AP35499 1836 aa18.53■□□□□ 0.56
DDB1-216ENST00000539739 A0A0D9SFI3 127 aa18.53■□□□□ 0.56
DDB1-216ENST00000539739 EGFRP00533 1210 aa18.53■□□□□ 0.56
DDB1-216ENST00000539739 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
DDB1-216ENST00000539739 MBD4O95243 580 aa18.52■□□□□ 0.56
DDB1-216ENST00000539739 YY1P25490 414 aa18.52■□□□□ 0.56
DDB1-216ENST00000539739 DYNLL1P63167 89 aaKnown RBP18.52■□□□□ 0.56
DDB1-216ENST00000539739 NBPF9Q3BBW0 867 aa18.52■□□□□ 0.56
DDB1-216ENST00000539739 SEC62Q99442 399 aaKnown RBP18.52■□□□□ 0.56
DDB1-216ENST00000539739 RIOK1Q9BRS2 568 aaKnown RBP18.52■□□□□ 0.56
DDB1-216ENST00000539739 TDRD3Q9H7E2 651 aaKnown RBP18.52■□□□□ 0.56
DDB1-216ENST00000539739 M0R2C6 588 aa18.52■□□□□ 0.55
DDB1-216ENST00000539739 GPAA1O43292 621 aa18.52■□□□□ 0.55
DDB1-216ENST00000539739 CDC42EP5Q6NZY7 148 aa18.52■□□□□ 0.55
DDB1-216ENST00000539739 CRNKL1Q9BZJ0 848 aaKnown RBP18.52■□□□□ 0.55
DDB1-216ENST00000539739 GPBP1L1Q9HC44 474 aaPredicted RBP18.52■□□□□ 0.55
DDB1-216ENST00000539739 RAD50Q92878 1312 aa18.51■□□□□ 0.55
DDB1-216ENST00000539739 HIRAP54198 1017 aaPredicted RBP18.51■□□□□ 0.55
DDB1-216ENST00000539739 EAPPQ56P03 285 aaPredicted RBP18.51■□□□□ 0.55
DDB1-216ENST00000539739 TEX11Q8IYF3 940 aa18.51■□□□□ 0.55
DDB1-216ENST00000539739 LCORLQ8N3X6 602 aa18.51■□□□□ 0.55
DDB1-216ENST00000539739 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
DDB1-216ENST00000539739 ARMT1Q9H993 441 aa18.51■□□□□ 0.55
DDB1-216ENST00000539739 NMRK2Q9NPI5 230 aa18.51■□□□□ 0.55
DDB1-216ENST00000539739 ZNF70Q9UC06 446 aaPredicted RBP18.51■□□□□ 0.55
DDB1-216ENST00000539739 GNAT2P19087 354 aa18.5■□□□□ 0.55
DDB1-216ENST00000539739 RHBDL3P58872 404 aa18.5■□□□□ 0.55
DDB1-216ENST00000539739 SPDYE2Q495Y8 402 aa18.5■□□□□ 0.55
DDB1-216ENST00000539739 PKNOX2Q96KN3 472 aa18.5■□□□□ 0.55
DDB1-216ENST00000539739 STRBPQ96SI9 672 aaKnown RBP18.5■□□□□ 0.55
DDB1-216ENST00000539739 VEZTQ9HBM0 779 aa18.5■□□□□ 0.55
DDB1-216ENST00000539739 CLRN2A0PK11 232 aa18.49■□□□□ 0.55
DDB1-216ENST00000539739 USP5P45974 858 aa18.49■□□□□ 0.55
DDB1-216ENST00000539739 ZC3H15Q8WU90 426 aaKnown RBP18.49■□□□□ 0.55
DDB1-216ENST00000539739 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
DDB1-216ENST00000539739 CCDC129Q6ZRS4 1044 aa18.49■□□□□ 0.55
DDB1-216ENST00000539739 ESYT1Q9BSJ8 1104 aa18.49■□□□□ 0.55
DDB1-216ENST00000539739 CLEC11AQ9Y240 323 aa18.49■□□□□ 0.55
DDB1-216ENST00000539739 SLC4A4Q9Y6R1 1079 aa18.49■□□□□ 0.55
DDB1-216ENST00000539739 ADAMTSL1Q8N6G6 1762 aa18.48■□□□□ 0.55
DDB1-216ENST00000539739 SGSM2O43147 1006 aa18.48■□□□□ 0.55
DDB1-216ENST00000539739 TNFAIP1Q13829 316 aa18.48■□□□□ 0.55
DDB1-216ENST00000539739 ANGEL2Q5VTE6 544 aaKnown RBP18.48■□□□□ 0.55
DDB1-216ENST00000539739 FKBP1CQ5VVH2 108 aa18.48■□□□□ 0.55
DDB1-216ENST00000539739 ZNF589Q86UQ0 364 aaPredicted RBP18.48■□□□□ 0.55
DDB1-216ENST00000539739 TGFBRAP1Q8WUH2 860 aa18.48■□□□□ 0.55
DDB1-216ENST00000539739 DCPSQ96C86 337 aaKnown RBP18.48■□□□□ 0.55
DDB1-216ENST00000539739 DDRGK1Q96HY6 314 aa18.48■□□□□ 0.55
DDB1-216ENST00000539739 IDI2Q9BXS1 227 aa18.48■□□□□ 0.55
DDB1-216ENST00000539739 APPP05067 770 aa18.47■□□□□ 0.55
DDB1-216ENST00000539739 TNNI2P48788 182 aa18.47■□□□□ 0.55
DDB1-216ENST00000539739 KIAA1211Q6ZU35 1233 aa18.47■□□□□ 0.55
DDB1-216ENST00000539739 APOBEC3FQ8IUX4 373 aaKnown RBP18.47■□□□□ 0.55
DDB1-216ENST00000539739 ATP8A2Q9NTI2 1148 aa18.47■□□□□ 0.55
DDB1-216ENST00000539739 GGA3Q9NZ52 723 aa18.47■□□□□ 0.55
DDB1-216ENST00000539739 PITPNM2Q9BZ72 1349 aa18.47■□□□□ 0.55
DDB1-216ENST00000539739 RPAP1Q9BWH6 1393 aaPredicted RBP18.47■□□□□ 0.55
DDB1-216ENST00000539739 TCP10L2B9ZVM9 353 aa18.46■□□□□ 0.55
DDB1-216ENST00000539739 PATL2C9JE40 543 aaKnown RBP18.46■□□□□ 0.55
DDB1-216ENST00000539739 WDHD1O75717 1129 aaPredicted RBP18.46■□□□□ 0.55
DDB1-216ENST00000539739 CACNB3P54284 484 aa18.46■□□□□ 0.55
DDB1-216ENST00000539739 PICALMQ13492 652 aa18.46■□□□□ 0.55
DDB1-216ENST00000539739 NACAP1Q9BZK3 213 aa18.46■□□□□ 0.55
DDB1-216ENST00000539739 ASTN2O75129 1339 aaPredicted RBP18.46■□□□□ 0.55
DDB1-216ENST00000539739 PRKAB2O43741 272 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
DDB1-216ENST00000539739 LDHDQ86WU2 507 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 SDR42E1Q8WUS8 393 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 PGAP2Q9UHJ9 254 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 ENTPD3O75355 529 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 NFIAQ12857 509 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 GIMAP6Q6P9H5 292 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 FAM83AQ86UY5 434 aa18.45■□□□□ 0.54
DDB1-216ENST00000539739 MAPKAPK5Q8IW41 473 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms