RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	NKIRAS1	Q9NYS0	192 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	UHRF1BP1	Q6BDS2	1440 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	DNM1	Q05193	864 aa	Known RBP	10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	RBM26	Q5T8P6	1007 aa	Known RBP	10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	TSHZ3	Q63HK5	1081 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	TSKS	Q9UJT2	592 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	HOXB7	P09629	217 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ERCC5	P28715	1186 aa	Predicted RBP	10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	MNAT1	P51948	309 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ASIC2	Q16515	512 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	FCHSD1	Q86WN1	690 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	FAM76A	Q8TAV0	307 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ATRIP	Q8WXE1	791 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	PICK1	Q9NRD5	415 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	STIM2	Q9P246	746 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	AGTPBP1	Q9UPW5	1226 aa		10.09	□□□□□ -0.79
ECHDC2-222	ENST00000539680	ABCC10	Q5T3U5	1492 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	RNMT	O43148	476 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CRCP	O75575	148 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TNFAIP3	P21580	790 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	AK2	P54819	239 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MYL5	Q02045	173 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CHRNA2	Q15822	529 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZNF569	Q5MCW4	686 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	FAM212A	Q96EL1	285 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	NOX5	Q96PH1	765 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZSWIM4	Q9H7M6	989 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	FAM204A	Q9H8W3	233 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TCOF1	Q13428	1488 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	C11orf95	C9JLR9	678 aa	Predicted RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	APOBR	Q0VD83	1088 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PUM3	Q15397	648 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SRGAP1	Q7Z6B7	1085 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MAIP1	Q8WWC4	291 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CTNND2	Q9UQB3	1225 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZKSCAN5	Q9Y2L8	839 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GIGYF1	O75420	1035 aa	Predicted RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PRDM10	Q9NQV6	1147 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ACTN4	O43707	911 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	RPS6KB1	P23443	525 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CCT6A	P40227	531 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	LACTB	P83111	547 aa	Predicted RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	INF2	Q27J81	1249 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MCTP2	Q6DN12	878 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	HMGB1P1	B2RPK0	211 aa	Predicted RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	EBAG9	O00559	213 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KRT5	P13647	590 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PTGS1	P23219	599 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	FAM160A1	Q05DH4	1040 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MTHFSD	Q2M296	383 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TRAPPC3L	Q5T215	181 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SMC1B	Q8NDV3	1235 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PLBD2	Q8NHP8	589 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	NOC4L	Q9BVI4	516 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GUCA1B	Q9UMX6	200 aa		10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	UTP11	Q9Y3A2	253 aa	Known RBP	10.08	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CFAP43	Q8NDM7	1665 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PLXNC1	O60486	1568 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MAST1	Q9Y2H9	1570 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	BACH1	O14867	736 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	YWHAE	P62258	255 aa	Known RBP	10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SYCE1	Q8N0S2	351 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ACSBG1	Q96GR2	724 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	LRRC2	Q9BYS8	371 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KIF24	Q5T7B8	1368 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CPLX4	Q7Z7G2	160 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PPFIBP2	Q8ND30	876 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	BAG1	Q99933	345 aa	Predicted RBP	10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	RSPH14	Q9UHP6	348 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PEG3	Q9GZU2	1588 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CLCN1	P35523	988 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	INTS8	Q75QN2	995 aa	Known RBP	10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PLCB1	Q9NQ66	1216 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ASXL2	Q76L83	1435 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680		E7EVH7	732 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CUTA	O60888	179 aa		10.07	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SH3BP5	O60239	455 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	B4GALNT4	Q76KP1	1039 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KRT25	Q7Z3Z0	450 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	IMPACT	Q9P2X3	320 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PDE6B	P35913	854 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ARID5A	Q03989	594 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TRPC3	Q13507	836 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	DPH6	Q7L8W6	267 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	C8orf58	Q8NAV2	365 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	JARID2	Q92833	1246 aa	Predicted RBP	10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KIFC2	Q96AC6	838 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	NAPG	Q99747	312 aa	Predicted RBP	10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZKSCAN3	Q9BRR0	538 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	NUCKS1	Q9H1E3	243 aa	Known RBP	10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KCNK9	Q9NPC2	374 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ATP2C2	O75185	946 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CEBPA	P49715	358 aa	Predicted RBP	10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KIF11	P52732	1056 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CAPZA3	Q96KX2	299 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ATP11A	P98196	1134 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	RAPGEF1	Q13905	1077 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms