RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 NSUN4Q96CB9 384 aaKnown RBP23.98■■□□□ 1.43
DDX55-205ENST00000538744 CRAMP1Q96RY5 1269 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 KRT23Q9C075 422 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 BRPF3Q9ULD4 1205 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 LRRC37AA6NMS7 1700 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 SALL1Q9NSC2 1324 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 GOLGA8BA8MQT2 603 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 DHX16O60231 1041 aaKnown RBP23.98■■□□□ 1.43
DDX55-205ENST00000538744 MECOMQ03112 1051 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 SPTY2D1Q68D10 685 aaPredicted RBP23.98■■□□□ 1.43
DDX55-205ENST00000538744 MFSD6Q6ZSS7 791 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 ZNF804AQ7Z570 1209 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 ZNF384Q8TF68 577 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 STAG1Q8WVM7 1258 aa23.98■■□□□ 1.43
DDX55-205ENST00000538744 H3BQV1 296 aa23.97■■□□□ 1.43
DDX55-205ENST00000538744 SH2B2O14492 632 aaPredicted RBP23.97■■□□□ 1.43
DDX55-205ENST00000538744 IGSF3O75054 1194 aa23.97■■□□□ 1.43
DDX55-205ENST00000538744 GPSM2P81274 684 aa23.97■■□□□ 1.43
DDX55-205ENST00000538744 DNM1Q05193 864 aaKnown RBP23.97■■□□□ 1.43
DDX55-205ENST00000538744 IFFO2Q5TF58 517 aa23.97■■□□□ 1.43
DDX55-205ENST00000538744 FERMT3Q86UX7 667 aa23.97■■□□□ 1.43
DDX55-205ENST00000538744 COL23A1Q86Y22 540 aaPredicted RBP23.97■■□□□ 1.43
DDX55-205ENST00000538744 ATP2B4P23634 1241 aa23.96■■□□□ 1.43
DDX55-205ENST00000538744 FIBPO43427 364 aa23.96■■□□□ 1.43
DDX55-205ENST00000538744 ZSCAN23Q3MJ62 389 aa23.96■■□□□ 1.43
DDX55-205ENST00000538744 SLC51AQ86UW1 340 aa23.96■■□□□ 1.43
DDX55-205ENST00000538744 TDRD7Q8NHU6 1098 aaKnown RBP23.96■■□□□ 1.43
DDX55-205ENST00000538744 WDR66Q8TBY9 1149 aa23.96■■□□□ 1.43
DDX55-205ENST00000538744 SDR42E1Q8WUS8 393 aa23.96■■□□□ 1.43
DDX55-205ENST00000538744 RNF41Q9H4P4 317 aaPredicted RBP23.96■■□□□ 1.43
DDX55-205ENST00000538744 NSFL1CQ9UNZ2 370 aaKnown RBP23.96■■□□□ 1.43
DDX55-205ENST00000538744 HPS5Q9UPZ3 1129 aa23.96■■□□□ 1.43
DDX55-205ENST00000538744 DUOX1Q9NRD9 1551 aa23.95■■□□□ 1.42
DDX55-205ENST00000538744 GADD45BO75293 160 aaPredicted RBP23.95■■□□□ 1.42
DDX55-205ENST00000538744 ZNF445P59923 1031 aa23.95■■□□□ 1.42
DDX55-205ENST00000538744 DYNLL1P63167 89 aaKnown RBP23.95■■□□□ 1.42
DDX55-205ENST00000538744 KRT85P78386 507 aa23.95■■□□□ 1.42
DDX55-205ENST00000538744 PPARAQ07869 468 aa23.95■■□□□ 1.42
DDX55-205ENST00000538744 TMC4Q7Z404 712 aa23.95■■□□□ 1.42
DDX55-205ENST00000538744 BRIP1Q9BX63 1249 aa23.95■■□□□ 1.42
DDX55-205ENST00000538744 ANAPC4Q9UJX5 808 aa23.95■■□□□ 1.42
DDX55-205ENST00000538744 BAZ2AQ9UIF9 1905 aaKnown RBP23.94■■□□□ 1.42
DDX55-205ENST00000538744 UFL1O94874 794 aa23.94■■□□□ 1.42
DDX55-205ENST00000538744 PRDX5P30044 214 aa23.94■■□□□ 1.42
DDX55-205ENST00000538744 MRE11P49959 708 aa23.94■■□□□ 1.42
DDX55-205ENST00000538744 GIMAP6Q6P9H5 292 aa23.94■■□□□ 1.42
DDX55-205ENST00000538744 NKX2-3Q8TAU0 364 aa23.94■■□□□ 1.42
DDX55-205ENST00000538744 RBM27Q9P2N5 1060 aaKnown RBP23.94■■□□□ 1.42
DDX55-205ENST00000538744 GGA1Q9UJY5 639 aa23.94■■□□□ 1.42
DDX55-205ENST00000538744 MYH15Q9Y2K3 1946 aa23.94■■□□□ 1.42
DDX55-205ENST00000538744 KDM4AO75164 1064 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 UBE2HP62256 183 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 IGDCC4Q8TDY8 1250 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 SYAP1Q96A49 352 aaPredicted RBP23.93■■□□□ 1.42
DDX55-205ENST00000538744 INCENPQ9NQS7 918 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 TACC3Q9Y6A5 838 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 LAMB1P07942 1786 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 LTBP1Q14766 1721 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 TMEM67Q5HYA8 995 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 ZSCAN16Q9H4T2 348 aaPredicted RBP23.93■■□□□ 1.42
DDX55-205ENST00000538744 PODXL2Q9NZ53 605 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 TMEM63CQ9P1W3 806 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 ZSWIM5Q9P217 1185 aa23.93■■□□□ 1.42
DDX55-205ENST00000538744 LIFRP42702 1097 aa23.92■■□□□ 1.42
DDX55-205ENST00000538744 RESTQ13127 1097 aa23.92■■□□□ 1.42
DDX55-205ENST00000538744 SGMS1Q86VZ5 419 aa23.92■■□□□ 1.42
DDX55-205ENST00000538744 DZIP1Q86YF9 867 aaKnown RBP23.92■■□□□ 1.42
DDX55-205ENST00000538744 MTA3Q9BTC8 594 aa23.92■■□□□ 1.42
DDX55-205ENST00000538744 CPLX1O14810 134 aa23.91■■□□□ 1.42
DDX55-205ENST00000538744 GAS2L3Q86XJ1 694 aa23.91■■□□□ 1.42
DDX55-205ENST00000538744 CRNKL1Q9BZJ0 848 aaKnown RBP23.91■■□□□ 1.42
DDX55-205ENST00000538744 GRPEL1Q9HAV7 217 aa23.91■■□□□ 1.42
DDX55-205ENST00000538744 LY9Q9HBG7 655 aa23.91■■□□□ 1.42
DDX55-205ENST00000538744 TOMM22Q9NS69 142 aa23.91■■□□□ 1.42
DDX55-205ENST00000538744 MINDY4BA8MYZ0 360 aa23.9■■□□□ 1.42
DDX55-205ENST00000538744 IFIT3O14879 490 aaKnown RBP23.9■■□□□ 1.42
DDX55-205ENST00000538744 LDHBP07195 334 aaKnown RBP23.9■■□□□ 1.42
DDX55-205ENST00000538744 RRP12Q5JTH9 1297 aaKnown RBP23.9■■□□□ 1.42
DDX55-205ENST00000538744 APOA5Q6Q788 366 aa23.9■■□□□ 1.42
DDX55-205ENST00000538744 NFXL1Q6ZNB6 911 aa23.9■■□□□ 1.42
DDX55-205ENST00000538744 GPR101Q96P66 508 aaPredicted RBP23.9■■□□□ 1.42
DDX55-205ENST00000538744 JAG2Q9Y219 1238 aa23.9■■□□□ 1.42
DDX55-205ENST00000538744 METAP2P50579 478 aaKnown RBP eCLIP23.9■■□□□ 1.42
DDX55-205ENST00000538744 SART3Q15020 963 aaKnown RBP23.9■■□□□ 1.42
DDX55-205ENST00000538744 AATFQ9NY61 560 aaKnown RBP eCLIP23.9■■□□□ 1.42
DDX55-205ENST00000538744 ELP1O95163 1332 aa23.89■■□□□ 1.42
DDX55-205ENST00000538744 PPEF1O14829 653 aaPredicted RBP23.89■■□□□ 1.41
DDX55-205ENST00000538744 XRCC6P12956 609 aaKnown RBP eCLIP23.89■■□□□ 1.418e-8■■■□□ 14.6
DDX55-205ENST00000538744 FDPSP14324 419 aaKnown RBP23.89■■□□□ 1.41
DDX55-205ENST00000538744 RAB11FIP4Q86YS3 637 aa23.89■■□□□ 1.41
DDX55-205ENST00000538744 SCAND2PQ9GZW5 306 aaPredicted RBP23.89■■□□□ 1.41
DDX55-205ENST00000538744 PARP3Q9Y6F1 533 aa23.89■■□□□ 1.41
DDX55-205ENST00000538744 ZBTB43O43298 467 aa23.88■■□□□ 1.41
DDX55-205ENST00000538744 GSTO1P78417 241 aa23.88■■□□□ 1.41
DDX55-205ENST00000538744 FAM173BQ6P4H8 233 aa23.88■■□□□ 1.41
DDX55-205ENST00000538744 SP8Q8IXZ3 490 aa23.88■■□□□ 1.41
DDX55-205ENST00000538744 CD209Q9NNX6 404 aa23.88■■□□□ 1.41
DDX55-205ENST00000538744 ATP8A2Q9NTI2 1148 aa23.88■■□□□ 1.41
DDX55-205ENST00000538744 CCDC69A6NI79 296 aa23.87■■□□□ 1.41
DDX55-205ENST00000538744 CDKL5O76039 1030 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms