RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ANKRD2Q9GZV1 360 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 XRCC6P12956 609 aaKnown RBP eCLIP16.65■□□□□ 0.26
ACTN1-205ENST00000538545 TRDNQ13061 729 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 HPS5Q9UPZ3 1129 aa16.65■□□□□ 0.26
ACTN1-205ENST00000538545 UFL1O94874 794 aa16.64■□□□□ 0.25
ACTN1-205ENST00000538545 NSUN4Q96CB9 384 aaKnown RBP16.64■□□□□ 0.25
ACTN1-205ENST00000538545 RIOK1Q9BRS2 568 aaKnown RBP16.64■□□□□ 0.25
ACTN1-205ENST00000538545 IRS2Q9Y4H2 1338 aa16.64■□□□□ 0.25
ACTN1-205ENST00000538545 CEBPZQ03701 1054 aaKnown RBP16.64■□□□□ 0.25
ACTN1-205ENST00000538545 DIXDC1Q155Q3 683 aa16.64■□□□□ 0.25
ACTN1-205ENST00000538545 ZSCAN23Q3MJ62 389 aa16.64■□□□□ 0.25
ACTN1-205ENST00000538545 FAM184AQ8NB25 1140 aa16.64■□□□□ 0.25
ACTN1-205ENST00000538545 ADD1P35611 737 aaKnown RBP16.63■□□□□ 0.25
ACTN1-205ENST00000538545 MICU3Q86XE3 530 aa16.63■□□□□ 0.25
ACTN1-205ENST00000538545 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
ACTN1-205ENST00000538545 FSD2A1L4K1 749 aa16.63■□□□□ 0.25
ACTN1-205ENST00000538545 FDPSP14324 419 aaKnown RBP16.63■□□□□ 0.25
ACTN1-205ENST00000538545 CRY2Q49AN0 593 aa16.63■□□□□ 0.25
ACTN1-205ENST00000538545 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
ACTN1-205ENST00000538545 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-205ENST00000538545 MMP10P09238 476 aa16.62■□□□□ 0.25
ACTN1-205ENST00000538545 EN1Q05925 392 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-205ENST00000538545 AIFM3Q96NN9 605 aa16.62■□□□□ 0.25
ACTN1-205ENST00000538545 ANO8Q9HCE9 1232 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-205ENST00000538545 POLLQ9UGP5 575 aa16.62■□□□□ 0.25
ACTN1-205ENST00000538545 SYCE3A1L190 88 aa16.62■□□□□ 0.25
ACTN1-205ENST00000538545 RIMBP2O15034 1052 aa16.62■□□□□ 0.25
ACTN1-205ENST00000538545 H3BQV1 296 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 CMTR1Q8N1G2 835 aaKnown RBP16.61■□□□□ 0.25
ACTN1-205ENST00000538545 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
ACTN1-205ENST00000538545 CHD4Q14839 1912 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 CYP2D6P10635 497 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 EZH2Q15910 746 aaKnown RBP16.61■□□□□ 0.25
ACTN1-205ENST00000538545 CCDC82Q8N4S0 544 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 MYH2Q9UKX2 1941 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 XDHP47989 1333 aa16.61■□□□□ 0.25
ACTN1-205ENST00000538545 C6orf229H3BNL8 230 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 PLSCR1O15162 318 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 CDC27P30260 824 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 AKNAD1Q5T1N1 836 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 MFSD6Q6ZSS7 791 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 PHKBQ93100 1093 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 PNPLA7Q6ZV29 1317 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 PPARAQ07869 468 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 TTC6Q86TZ1 520 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 ZNF274Q96GC6 653 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-205ENST00000538545 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-205ENST00000538545 TMEM67Q5HYA8 995 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 NFXL1Q6ZNB6 911 aa16.6■□□□□ 0.25
ACTN1-205ENST00000538545 ANGEL1Q9UNK9 670 aaKnown RBP16.6■□□□□ 0.25
ACTN1-205ENST00000538545 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
ACTN1-205ENST00000538545 IFIT3O14879 490 aaKnown RBP16.59■□□□□ 0.25
ACTN1-205ENST00000538545 ALX1Q15699 326 aa16.59■□□□□ 0.25
ACTN1-205ENST00000538545 RBM17Q96I25 401 aaKnown RBP16.59■□□□□ 0.25
ACTN1-205ENST00000538545 NACAP1Q9BZK3 213 aa16.59■□□□□ 0.25
ACTN1-205ENST00000538545 USP17L12C9JPN9 530 aa16.59■□□□□ 0.25
ACTN1-205ENST00000538545 USP17L21D6R901 530 aa16.59■□□□□ 0.25
ACTN1-205ENST00000538545 DZIP1Q86YF9 867 aaKnown RBP16.59■□□□□ 0.25
ACTN1-205ENST00000538545 GRPEL1Q9HAV7 217 aa16.59■□□□□ 0.25
ACTN1-205ENST00000538545 LY9Q9HBG7 655 aa16.59■□□□□ 0.25
ACTN1-205ENST00000538545 PDCP20941 246 aa16.58■□□□□ 0.25
ACTN1-205ENST00000538545 PTMSP20962 102 aa16.58■□□□□ 0.25
ACTN1-205ENST00000538545 SALL1Q9NSC2 1324 aa16.58■□□□□ 0.24
ACTN1-205ENST00000538545 APOA5Q6Q788 366 aa16.58■□□□□ 0.24
ACTN1-205ENST00000538545 MXD3Q9BW11 206 aa16.58■□□□□ 0.24
ACTN1-205ENST00000538545 ANKRD31Q8N7Z5 1873 aa16.58■□□□□ 0.24
ACTN1-205ENST00000538545 CPLX1O14810 134 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 TBC1D16Q8TBP0 767 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 FBXW7Q969H0 707 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 CD209Q9NNX6 404 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 GGA1Q9UJY5 639 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 LEMD3Q9Y2U8 911 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 NMT2O60551 498 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 EVCP57679 992 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 RESTQ13127 1097 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 CTR9Q6PD62 1173 aa16.57■□□□□ 0.24
ACTN1-205ENST00000538545 TDRD7Q8NHU6 1098 aaKnown RBP16.57■□□□□ 0.24
ACTN1-205ENST00000538545 GNAT2P19087 354 aa16.56■□□□□ 0.24
ACTN1-205ENST00000538545 ORC3Q9UBD5 711 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-205ENST00000538545 F8W031 263 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-205ENST00000538545 USP17L8P0C7I0 530 aa16.56■□□□□ 0.24
ACTN1-205ENST00000538545 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.241e-7■■■■■ 29
ACTN1-205ENST00000538545 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 LDHBP07195 334 aaKnown RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 FAM47AQ5JRC9 791 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 STAG1Q8WVM7 1258 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.249e-7■□□□□ 10.1
ACTN1-205ENST00000538545 DCP1AQ9NPI6 582 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 ATP6V1DQ9Y5K8 247 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 SRGNP10124 158 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 DOK7Q18PE1 504 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms