RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 SRGNP10124 158 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 SLC5A1P13866 664 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 HSPA6P17066 643 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 CHRNDQ07001 517 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 PUM3Q15397 648 aaKnown RBP12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 GORABQ5T7V8 394 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 LHX8Q68G74 356 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 DNAJC5GQ8N7S2 189 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 TMX4Q9H1E5 349 aaPredicted RBP12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 ECHDC1Q9NTX5 307 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 PODXL2Q9NZ53 605 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 MINPP1Q9UNW1 487 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 SALL3Q9BXA9 1300 aa12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 TNRC6CQ9HCJ0 1690 aaKnown RBP12.29□□□□□ -0.44
NPIPB3-209ENST00000538439 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 CFAP99D6REC4 459 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 GLRX3O76003 335 aaKnown RBP12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 IFIT1P09914 478 aaKnown RBP12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 TIMM10P62072 90 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 WASHC4Q2M389 1173 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 CCDC158Q5M9N0 1113 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 STYK1Q6J9G0 422 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 VGLL2Q8N8G2 317 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 LPIN2Q92539 896 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 ZNF622Q969S3 477 aaKnown RBP eCLIP12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
NPIPB3-209ENST00000538439 KCNJ4P48050 445 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 UBE4AQ14139 1066 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 GLMNQ92990 594 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 CNKSR1Q969H4 720 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 LRCH3Q96II8 777 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 DBNDD2Q9BQY9 259 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 PRR14Q9BWN1 585 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 HMX1Q9NP08 348 aaPredicted RBP12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 DBNLQ9UJU6 430 aaKnown RBP12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 ZNF609O15014 1411 aa12.27□□□□□ -0.45
NPIPB3-209ENST00000538439 POM121CA8CG34 1229 aa12.26□□□□□ -0.45
NPIPB3-209ENST00000538439 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
NPIPB3-209ENST00000538439 TAF5LO75529 589 aa12.26□□□□□ -0.45
NPIPB3-209ENST00000538439 FGFR2P21802 821 aa12.26□□□□□ -0.45
NPIPB3-209ENST00000538439 XAGE2Q96GT9 111 aa12.26□□□□□ -0.45
NPIPB3-209ENST00000538439 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
NPIPB3-209ENST00000538439 TLR7Q9NYK1 1049 aaKnown RBP12.26□□□□□ -0.45
NPIPB3-209ENST00000538439 C10orf71Q711Q0 1435 aa12.26□□□□□ -0.45
NPIPB3-209ENST00000538439 ATP5JP18859 108 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 IRF5Q13568 498 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 TTC39AQ5SRH9 613 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 TSHZ3Q63HK5 1081 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 SP8Q8IXZ3 490 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 PI4K2BQ8TCG2 481 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 LRRN4Q8WUT4 740 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 ANKIB1Q9P2G1 1089 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 ANKRD31Q8N7Z5 1873 aa12.25□□□□□ -0.45
NPIPB3-209ENST00000538439 ACTN4O43707 911 aaKnown RBP12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 ATP2B4P23634 1241 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 CHRNA5P30532 468 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 XDHP47989 1333 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 TGFB2P61812 414 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 Q3C1V9 767 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 CAVIN4Q5BKX8 364 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 RETREG3Q86VR2 466 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 CNTROBQ8N137 903 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 PRR7Q8TB68 274 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 RILPL2Q969X0 211 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 BOLA2Q9H3K6 86 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 ATP6V0A2Q9Y487 856 aa12.24□□□□□ -0.45
NPIPB3-209ENST00000538439 ZNF804BA4D1E1 1349 aa12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 UQCRFS1P1P0C7P4 283 aa12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 SDSP20132 328 aa12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 ADORA1P30542 326 aa12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 MORN1Q5T089 497 aa12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 GGA1Q9UJY5 639 aa12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 NSFL1CQ9UNZ2 370 aaKnown RBP12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 TAF1P21675 1872 aa12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 SPEF2Q9C093 1822 aa12.23□□□□□ -0.45
NPIPB3-209ENST00000538439 DPEP1P16444 411 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 GPSM2P81274 684 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 CCDC102BQ68D86 513 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 CASC1Q6TDU7 716 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 TTLL6Q8N841 843 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 EVI5LQ96CN4 794 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 ZNF512BQ96KM6 892 aaPredicted RBP12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 GNL3LQ9NVN8 582 aaKnown RBP12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 COL4A1P02462 1669 aa12.22□□□□□ -0.45
NPIPB3-209ENST00000538439 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
NPIPB3-209ENST00000538439 SNAP23O00161 211 aa12.21□□□□□ -0.45
NPIPB3-209ENST00000538439 GRIN3BO60391 1043 aa12.21□□□□□ -0.45
NPIPB3-209ENST00000538439 EIF5BO60841 1220 aaKnown RBP12.21□□□□□ -0.45
NPIPB3-209ENST00000538439 CDC45O75419 566 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms